RNA–Protein interactions for RNA: ENST00000248668.4

LRFN1-201, Transcript of leucine rich repeat and fibronectin type III domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LRFN1, Length 3,381 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN1-201ENST00000248668 PKD1L3Q7Z443 1732 aa18.9■□□□□ 0.62
LRFN1-201ENST00000248668 PUS3Q9BZE2 481 aaKnown RBP18.89■□□□□ 0.61
LRFN1-201ENST00000248668 AFDNP55196 1824 aaKnown RBP18.89■□□□□ 0.61
LRFN1-201ENST00000248668 MAP4K1Q92918 833 aa18.89■□□□□ 0.61
LRFN1-201ENST00000248668 SYCE3A1L190 88 aa18.89■□□□□ 0.61
LRFN1-201ENST00000248668 H7C1W4 665 aa18.89■□□□□ 0.61
LRFN1-201ENST00000248668 GADD45BO75293 160 aaPredicted RBP18.89■□□□□ 0.61
LRFN1-201ENST00000248668 HIP1O00291 1037 aa18.88■□□□□ 0.61
LRFN1-201ENST00000248668 SYNE4Q8N205 404 aa18.88■□□□□ 0.61
LRFN1-201ENST00000248668 PIGBQ92521 554 aa18.88■□□□□ 0.61
LRFN1-201ENST00000248668 STK3Q13188 491 aa18.88■□□□□ 0.61
LRFN1-201ENST00000248668 FAM89AQ96GI7 184 aa18.88■□□□□ 0.61
LRFN1-201ENST00000248668 RPAP1Q9BWH6 1393 aaPredicted RBP18.87■□□□□ 0.61
LRFN1-201ENST00000248668 GOLIM4O00461 696 aa18.87■□□□□ 0.61
LRFN1-201ENST00000248668 GPTP24298 496 aa18.87■□□□□ 0.61
LRFN1-201ENST00000248668 NASPP49321 788 aaPredicted RBP18.87■□□□□ 0.61
LRFN1-201ENST00000248668 PRIM1P49642 420 aaKnown RBP18.87■□□□□ 0.61
LRFN1-201ENST00000248668 ME3Q16798 604 aa18.87■□□□□ 0.61
LRFN1-201ENST00000248668 ZSWIM6Q9HCJ5 1215 aa18.87■□□□□ 0.61
LRFN1-201ENST00000248668 ATP5JP18859 108 aa18.87■□□□□ 0.61
LRFN1-201ENST00000248668 SYT1P21579 422 aa18.87■□□□□ 0.61
LRFN1-201ENST00000248668 WDR33Q9C0J8 1336 aaKnown RBP18.87■□□□□ 0.61
LRFN1-201ENST00000248668 GJB2P29033 226 aa18.87■□□□□ 0.61
LRFN1-201ENST00000248668 ATG9AQ7Z3C6 839 aa18.87■□□□□ 0.61
LRFN1-201ENST00000248668 ARFGEF2Q9Y6D5 1785 aa18.87■□□□□ 0.61
LRFN1-201ENST00000248668 TPCN1Q9ULQ1 816 aa18.86■□□□□ 0.61
LRFN1-201ENST00000248668 CNPY2Q9Y2B0 182 aa18.86■□□□□ 0.61
LRFN1-201ENST00000248668 NKX1-1Q15270 411 aaPredicted RBP18.86■□□□□ 0.61
LRFN1-201ENST00000248668 VPS37CA5D8V6 355 aaPredicted RBP18.85■□□□□ 0.61
LRFN1-201ENST00000248668 VPS53Q5VIR6 699 aa18.85■□□□□ 0.61
LRFN1-201ENST00000248668 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.85■□□□□ 0.61
LRFN1-201ENST00000248668 STX6O43752 255 aa18.85■□□□□ 0.61
LRFN1-201ENST00000248668 USP48Q86UV5 1035 aa18.85■□□□□ 0.61
LRFN1-201ENST00000248668 GLI3P10071 1580 aa18.85■□□□□ 0.61
LRFN1-201ENST00000248668 COL15A1P39059 1388 aa18.85■□□□□ 0.61
LRFN1-201ENST00000248668 TAF5LO75529 589 aa18.85■□□□□ 0.61
LRFN1-201ENST00000248668 ST3GAL1Q11201 340 aa18.85■□□□□ 0.61
LRFN1-201ENST00000248668 BLOC1S2Q6QNY1 142 aa18.84■□□□□ 0.61
LRFN1-201ENST00000248668 LRRC2Q9BYS8 371 aa18.84■□□□□ 0.61
LRFN1-201ENST00000248668 SNRKQ9NRH2 765 aa18.84■□□□□ 0.61
LRFN1-201ENST00000248668 STRCQ7RTU9 1775 aa18.84■□□□□ 0.61
LRFN1-201ENST00000248668 FIBPO43427 364 aa18.84■□□□□ 0.61
LRFN1-201ENST00000248668 RNF214Q8ND24 703 aa18.84■□□□□ 0.61
LRFN1-201ENST00000248668 RBSNQ9H1K0 784 aa18.84■□□□□ 0.61
LRFN1-201ENST00000248668 ISY1Q9ULR0 285 aaKnown RBP18.84■□□□□ 0.61
LRFN1-201ENST00000248668 CLCN1P35523 988 aa18.84■□□□□ 0.61
LRFN1-201ENST00000248668 CCDC191Q8NCU4 936 aa18.84■□□□□ 0.61
LRFN1-201ENST00000248668 ERBB4Q15303 1308 aa18.83■□□□□ 0.61
LRFN1-201ENST00000248668 KCPQ6ZWJ8 1503 aa18.83■□□□□ 0.61
LRFN1-201ENST00000248668 MED23Q9ULK4 1368 aa18.83■□□□□ 0.6
LRFN1-201ENST00000248668 ZSCAN22P10073 491 aaPredicted RBP18.83■□□□□ 0.6
LRFN1-201ENST00000248668 PDE4CQ08493 712 aa18.83■□□□□ 0.6
LRFN1-201ENST00000248668 RNF20Q5VTR2 975 aa18.83■□□□□ 0.6
LRFN1-201ENST00000248668 FERMT3Q86UX7 667 aa18.82■□□□□ 0.6
LRFN1-201ENST00000248668 ATG3Q9NT62 314 aa18.82■□□□□ 0.6
LRFN1-201ENST00000248668 ABCC6O95255 1503 aa18.82■□□□□ 0.6
LRFN1-201ENST00000248668 TRIM44Q96DX7 344 aaPredicted RBP18.82■□□□□ 0.6
LRFN1-201ENST00000248668 HAUS7Q99871 368 aa18.82■□□□□ 0.6
LRFN1-201ENST00000248668 ZNF609O15014 1411 aa18.82■□□□□ 0.6
LRFN1-201ENST00000248668 TCHHQ07283 1943 aa18.82■□□□□ 0.6
LRFN1-201ENST00000248668 A0A1B0GUL7 405 aa18.81■□□□□ 0.6
LRFN1-201ENST00000248668 EYA2O00167 538 aa18.81■□□□□ 0.6
LRFN1-201ENST00000248668 ZNF445P59923 1031 aa18.81■□□□□ 0.6
LRFN1-201ENST00000248668 FKBP4Q02790 459 aaKnown RBP eCLIP18.81■□□□□ 0.6
LRFN1-201ENST00000248668 HLFQ16534 295 aa18.81■□□□□ 0.6
LRFN1-201ENST00000248668 CCDC57Q2TAC2 916 aa18.81■□□□□ 0.6
LRFN1-201ENST00000248668 TAF7LQ5H9L4 462 aa18.81■□□□□ 0.6
LRFN1-201ENST00000248668 TM6SF1Q9BZW5 370 aa18.81■□□□□ 0.6
LRFN1-201ENST00000248668 PARP4Q9UKK3 1724 aaKnown RBP18.81■□□□□ 0.6
LRFN1-201ENST00000248668 PSMA5P28066 241 aa18.81■□□□□ 0.6
LRFN1-201ENST00000248668 KIF6Q6ZMV9 814 aa18.81■□□□□ 0.6
LRFN1-201ENST00000248668 TCIRG1Q13488 830 aa18.81■□□□□ 0.6
LRFN1-201ENST00000248668 KCNB2Q92953 911 aa18.81■□□□□ 0.6
LRFN1-201ENST00000248668 ADORA1P30542 326 aa18.8■□□□□ 0.6
LRFN1-201ENST00000248668 FAM173BQ6P4H8 233 aa18.8■□□□□ 0.6
LRFN1-201ENST00000248668 PAG1Q9NWQ8 432 aa18.8■□□□□ 0.6
LRFN1-201ENST00000248668 A0A0G2JLW4 131 aa18.8■□□□□ 0.6
LRFN1-201ENST00000248668 PPFIA3O75145 1194 aa18.8■□□□□ 0.6
LRFN1-201ENST00000248668 IL15P40933 162 aaPredicted RBP18.8■□□□□ 0.6
LRFN1-201ENST00000248668 HSP90AB3PQ58FF7 597 aa18.8■□□□□ 0.6
LRFN1-201ENST00000248668 GORABQ5T7V8 394 aa18.8■□□□□ 0.6
LRFN1-201ENST00000248668 ADAMTS2O95450 1211 aa18.79■□□□□ 0.6
LRFN1-201ENST00000248668 F13A1P00488 732 aa18.79■□□□□ 0.6
LRFN1-201ENST00000248668 FAM177BA6PVY3 158 aa18.79■□□□□ 0.6
LRFN1-201ENST00000248668 IFIT1P09914 478 aaKnown RBP18.79■□□□□ 0.6
LRFN1-201ENST00000248668 RPS6KB1P23443 525 aa18.79■□□□□ 0.6
LRFN1-201ENST00000248668 MCMDC2Q4G0Z9 681 aa18.79■□□□□ 0.6
LRFN1-201ENST00000248668 MBD3O95983 291 aa18.79■□□□□ 0.6
LRFN1-201ENST00000248668 DNM1Q05193 864 aaKnown RBP18.79■□□□□ 0.6
LRFN1-201ENST00000248668 KBTBD3Q8NAB2 608 aa18.79■□□□□ 0.6
LRFN1-201ENST00000248668 CEP126Q9P2H0 1117 aa18.79■□□□□ 0.6
LRFN1-201ENST00000248668 ANP32BQ92688 251 aaKnown RBP18.78■□□□□ 0.6
LRFN1-201ENST00000248668 SLC4A9Q96Q91 983 aa18.78■□□□□ 0.6
LRFN1-201ENST00000248668 SH2B1Q9NRF2 756 aaPredicted RBP18.78■□□□□ 0.6
LRFN1-201ENST00000248668 STARD3NLO95772 234 aa18.78■□□□□ 0.6
LRFN1-201ENST00000248668 TOB2Q14106 344 aaPredicted RBP18.78■□□□□ 0.6
LRFN1-201ENST00000248668 ZSCAN31Q96LW9 406 aaPredicted RBP18.78■□□□□ 0.6
LRFN1-201ENST00000248668 ISCA1Q9BUE6 129 aa18.78■□□□□ 0.6
LRFN1-201ENST00000248668 TBC1D2BQ9UPU7 963 aa18.78■□□□□ 0.6
LRFN1-201ENST00000248668 CYP21A2P08686 494 aa18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms