RNA–Protein interactions for RNA: ENST00000248594.10

PTPN12-201, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN12, Length 3,406 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-201ENST00000248594 GEMIN8Q9NWZ8 242 aaKnown RBP21.32■■□□□ 1
PTPN12-201ENST00000248594 TBC1D8O95759 1140 aa21.32■■□□□ 1
PTPN12-201ENST00000248594 GNAI3P08754 354 aa21.32■■□□□ 1
PTPN12-201ENST00000248594 CEP57L1Q8IYX8 460 aa21.32■■□□□ 1
PTPN12-201ENST00000248594 GOLGA5Q8TBA6 731 aa21.32■■□□□ 1
PTPN12-201ENST00000248594 PDE11AQ9HCR9 933 aa21.32■■□□□ 1
PTPN12-201ENST00000248594 LRRC2Q9BYS8 371 aa21.32■■□□□ 1
PTPN12-201ENST00000248594 IQCB1Q15051 598 aa21.31■■□□□ 1
PTPN12-201ENST00000248594 MUM1L1Q5H9M0 696 aa21.31■■□□□ 1
PTPN12-201ENST00000248594 CNTROBQ8N137 903 aa21.31■■□□□ 1
PTPN12-201ENST00000248594 PUF60Q9UHX1 559 aaKnown RBP21.31■■□□□ 1
PTPN12-201ENST00000248594 H3BQF6 201 aa21.3■■□□□ 1
PTPN12-201ENST00000248594 ACTN2P35609 894 aa21.3■■□□□ 1
PTPN12-201ENST00000248594 MRFAP1L1Q96HT8 127 aa21.3■■□□□ 1
PTPN12-201ENST00000248594 ST3GAL1Q11201 340 aa21.3■■□□□ 1
PTPN12-201ENST00000248594 CC2D1AQ6P1N0 951 aaPredicted RBP21.3■■□□□ 1
PTPN12-201ENST00000248594 NCAPGQ9BPX3 1015 aa21.3■■□□□ 1
PTPN12-201ENST00000248594 LSG1Q9H089 658 aaKnown RBP21.3■■□□□ 1
PTPN12-201ENST00000248594 KCNG1Q9UIX4 513 aa21.3■■□□□ 1
PTPN12-201ENST00000248594 EIF3CLB5ME19 914 aaKnown RBP21.3■■□□□ 1
PTPN12-201ENST00000248594 ZRANB2O95218 330 aaKnown RBP eCLIP21.3■■□□□ 11e-7■□□□□ 8.2
PTPN12-201ENST00000248594 ETF1P62495 437 aaKnown RBP21.3■■□□□ 1
PTPN12-201ENST00000248594 EIF3CQ99613 913 aaKnown RBP21.3■■□□□ 1
PTPN12-201ENST00000248594 RNF216Q9NWF9 866 aaPredicted RBP21.3■■□□□ 1
PTPN12-201ENST00000248594 STK31Q9BXU1 1019 aa21.29■■□□□ 1
PTPN12-201ENST00000248594 PPP6R1Q9UPN7 881 aa21.29■■□□□ 1
PTPN12-201ENST00000248594 N4BP1O75113 896 aaKnown RBP21.29■■□□□ 1
PTPN12-201ENST00000248594 PDCP20941 246 aa21.29■■□□□ 1
PTPN12-201ENST00000248594 BRF1Q92994 677 aa21.29■■□□□ 1
PTPN12-201ENST00000248594 MNAT1P51948 309 aa21.29■■□□□ 1
PTPN12-201ENST00000248594 DHX8Q14562 1220 aaKnown RBP21.29■■□□□ 1
PTPN12-201ENST00000248594 KARSQ15046 597 aaKnown RBP21.29■■□□□ 1
PTPN12-201ENST00000248594 ARMCX5Q6P1M9 558 aa21.29■■□□□ 1
PTPN12-201ENST00000248594 REXO1L1PQ8IX06 675 aa21.29■■□□□ 1
PTPN12-201ENST00000248594 SUGCTQ9HAC7 445 aa21.29■■□□□ 1
PTPN12-201ENST00000248594 ARHGEF40Q8TER5 1519 aa21.29■■□□□ 1
PTPN12-201ENST00000248594 TRPM2O94759 1503 aa21.28■■□□□ 1
PTPN12-201ENST00000248594 PATL2C9JE40 543 aaKnown RBP21.28■■□□□ 1
PTPN12-201ENST00000248594 GUCY2CP25092 1073 aa21.28■■□□□ 1
PTPN12-201ENST00000248594 CTR9Q6PD62 1173 aa21.28■■□□□ 1
PTPN12-201ENST00000248594 FSIP1Q8NA03 581 aa21.28■■□□□ 1
PTPN12-201ENST00000248594 PARD6BQ9BYG5 372 aa21.28■■□□□ 1
PTPN12-201ENST00000248594 DIP2CQ9Y2E4 1556 aa21.28■■□□□ 1
PTPN12-201ENST00000248594 ZNF853P0CG23 659 aa21.27■■□□□ 1
PTPN12-201ENST00000248594 GSDMDP57764 484 aa21.27■■□□□ 1
PTPN12-201ENST00000248594 CT47A1Q5JQC4 288 aaPredicted RBP21.27■■□□□ 1
PTPN12-201ENST00000248594 ZSCAN31Q96LW9 406 aaPredicted RBP21.27■■□□□ 1
PTPN12-201ENST00000248594 TSPYL4Q9UJ04 414 aa21.27■■□□□ 1
PTPN12-201ENST00000248594 SH2B1Q9NRF2 756 aaPredicted RBP21.27■■□□□ 1
PTPN12-201ENST00000248594 ANO10Q9NW15 660 aa21.27■■□□□ 1
PTPN12-201ENST00000248594 FAN1Q9Y2M0 1017 aa21.27■■□□□ 1
PTPN12-201ENST00000248594 L2HGDHQ9H9P8 463 aa21.27■■□□□ 1
PTPN12-201ENST00000248594 FAM193AP78312 1265 aa21.26■□□□□ 0.99
PTPN12-201ENST00000248594 DEPDC5O75140 1603 aa21.26■□□□□ 0.99
PTPN12-201ENST00000248594 UBTFL1P0CB47 393 aaPredicted RBP21.26■□□□□ 0.99
PTPN12-201ENST00000248594 C14orf37Q86TY3 774 aa21.26■□□□□ 0.99
PTPN12-201ENST00000248594 YEATS2Q9ULM3 1422 aa21.25■□□□□ 0.99
PTPN12-201ENST00000248594 TADA3O75528 432 aa21.25■□□□□ 0.99
PTPN12-201ENST00000248594 SF3A1Q15459 793 aaKnown RBP21.25■□□□□ 0.99
PTPN12-201ENST00000248594 CCDC30Q5VVM6 783 aa21.25■□□□□ 0.99
PTPN12-201ENST00000248594 CCDC9Q9Y3X0 531 aaKnown RBP21.25■□□□□ 0.99
PTPN12-201ENST00000248594 SRGAP3O43295 1099 aa21.25■□□□□ 0.99
PTPN12-201ENST00000248594 SERPINC1P01008 464 aa21.25■□□□□ 0.99
PTPN12-201ENST00000248594 PPP2R3AQ06190 1150 aa21.25■□□□□ 0.99
PTPN12-201ENST00000248594 BLOC1S2Q6QNY1 142 aa21.25■□□□□ 0.99
PTPN12-201ENST00000248594 FAM135BQ49AJ0 1406 aa21.25■□□□□ 0.99
PTPN12-201ENST00000248594 A0A1B0GVL5 298 aa21.25■□□□□ 0.99
PTPN12-201ENST00000248594 LONRF2Q1L5Z9 754 aa21.25■□□□□ 0.99
PTPN12-201ENST00000248594 CFAP100Q494V2 611 aa21.25■□□□□ 0.99
PTPN12-201ENST00000248594 RBM8AQ9Y5S9 174 aaKnown RBP21.25■□□□□ 0.99
PTPN12-201ENST00000248594 RHOXF2BP0C7M4 288 aa21.24■□□□□ 0.99
PTPN12-201ENST00000248594 DNAJC21Q5F1R6 531 aaKnown RBP21.24■□□□□ 0.99
PTPN12-201ENST00000248594 DHX40Q8IX18 779 aaKnown RBP21.24■□□□□ 0.99
PTPN12-201ENST00000248594 RHOXF2Q9BQY4 288 aa21.24■□□□□ 0.99
PTPN12-201ENST00000248594 NPATQ14207 1427 aa21.24■□□□□ 0.99
PTPN12-201ENST00000248594 CCT4P50991 539 aaKnown RBP21.24■□□□□ 0.99
PTPN12-201ENST00000248594 HSP90B2PQ58FF3 399 aa21.24■□□□□ 0.99
PTPN12-201ENST00000248594 CDC25BP30305 580 aa21.23■□□□□ 0.99
PTPN12-201ENST00000248594 VPS53Q5VIR6 699 aa21.23■□□□□ 0.99
PTPN12-201ENST00000248594 YY1AP1Q9H869 796 aa21.23■□□□□ 0.99
PTPN12-201ENST00000248594 LIG3P49916 1009 aa21.23■□□□□ 0.99
PTPN12-201ENST00000248594 PPP1R42Q7Z4L9 355 aa21.23■□□□□ 0.99
PTPN12-201ENST00000248594 TAF6LQ9Y6J9 622 aa21.23■□□□□ 0.99
PTPN12-201ENST00000248594 NSD2O96028 1365 aa21.23■□□□□ 0.99
PTPN12-201ENST00000248594 HSP90AB2PQ58FF8 381 aa21.23■□□□□ 0.99
PTPN12-201ENST00000248594 DNAAF4Q8WXU2 420 aa21.23■□□□□ 0.99
PTPN12-201ENST00000248594 NAT10Q9H0A0 1025 aaKnown RBP21.23■□□□□ 0.99
PTPN12-201ENST00000248594 GOLPH3LQ9H4A5 285 aa21.23■□□□□ 0.99
PTPN12-201ENST00000248594 DPCR1Q3MIW9 517 aa21.22■□□□□ 0.99
PTPN12-201ENST00000248594 ADGRB2O60241 1585 aa21.22■□□□□ 0.99
PTPN12-201ENST00000248594 ELP1O95163 1332 aa21.22■□□□□ 0.99
PTPN12-201ENST00000248594 LRRFIP1Q32MZ4 808 aaKnown RBP21.22■□□□□ 0.99
PTPN12-201ENST00000248594 FAM227BQ96M60 508 aa21.22■□□□□ 0.99
PTPN12-201ENST00000248594 GDAP1L1Q96MZ0 367 aa21.22■□□□□ 0.99
PTPN12-201ENST00000248594 MAGEA9P43362 315 aa21.22■□□□□ 0.99
PTPN12-201ENST00000248594 ATP8B2P98198 1209 aa21.22■□□□□ 0.99
PTPN12-201ENST00000248594 NBPF11Q86T75 865 aa21.22■□□□□ 0.99
PTPN12-201ENST00000248594 DESI2Q9BSY9 194 aa21.22■□□□□ 0.99
PTPN12-201ENST00000248594 KNDC1Q76NI1 1749 aa21.21■□□□□ 0.99
PTPN12-201ENST00000248594 ATP1A3P13637 1013 aa21.21■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 72.3 ms