RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 NTSR2O95665 410 aa17.36■□□□□ 0.37
SDF2-201ENST00000247020 IFIT5Q13325 482 aaKnown RBP17.36■□□□□ 0.37
SDF2-201ENST00000247020 SUSD4Q5VX71 490 aa17.36■□□□□ 0.37
SDF2-201ENST00000247020 ATG9AQ7Z3C6 839 aa17.36■□□□□ 0.37
SDF2-201ENST00000247020 EAF2Q96CJ1 260 aaPredicted RBP17.36■□□□□ 0.37
SDF2-201ENST00000247020 BCL11AQ9H165 835 aa17.36■□□□□ 0.37
SDF2-201ENST00000247020 RTL9Q8NET4 1388 aa17.36■□□□□ 0.37
SDF2-201ENST00000247020 TNS1Q9HBL0 1735 aaKnown RBP17.36■□□□□ 0.37
SDF2-201ENST00000247020 MFAP1P55081 439 aaKnown RBP17.36■□□□□ 0.37
SDF2-201ENST00000247020 TNNI3KQ59H18 835 aa17.36■□□□□ 0.37
SDF2-201ENST00000247020 FPGT-TNNI3KV9GXZ4 949 aa17.36■□□□□ 0.37
SDF2-201ENST00000247020 ZPR1O75312 459 aa17.35■□□□□ 0.37
SDF2-201ENST00000247020 KCNQ4P56696 695 aa17.35■□□□□ 0.37
SDF2-201ENST00000247020 TFCP2Q12800 502 aa17.35■□□□□ 0.37
SDF2-201ENST00000247020 CNTROBQ8N137 903 aa17.35■□□□□ 0.37
SDF2-201ENST00000247020 ANKRD18BA2A2Z9 1011 aa17.34■□□□□ 0.37
SDF2-201ENST00000247020 PLSCR1O15162 318 aa17.34■□□□□ 0.37
SDF2-201ENST00000247020 TRIM37O94972 964 aa17.34■□□□□ 0.37
SDF2-201ENST00000247020 RBM25P49756 843 aaKnown RBP17.34■□□□□ 0.37
SDF2-201ENST00000247020 C22orf23Q9BZE7 217 aa17.34■□□□□ 0.37
SDF2-201ENST00000247020 ZNF609O15014 1411 aa17.33■□□□□ 0.37
SDF2-201ENST00000247020 TRIM6-TRIM34B2RNG4 842 aa17.33■□□□□ 0.37
SDF2-201ENST00000247020 TSHZ3Q63HK5 1081 aa17.33■□□□□ 0.37
SDF2-201ENST00000247020 NYXQ9GZU5 481 aa17.33■□□□□ 0.37
SDF2-201ENST00000247020 LRRC4BQ9NT99 713 aa17.33■□□□□ 0.37
SDF2-201ENST00000247020 SPEF2Q9C093 1822 aa17.33■□□□□ 0.36
SDF2-201ENST00000247020 EPB41L2O43491 1005 aaKnown RBP17.32■□□□□ 0.36
SDF2-201ENST00000247020 ITGA6P23229 1130 aa17.32■□□□□ 0.36
SDF2-201ENST00000247020 TAF7LQ5H9L4 462 aa17.32■□□□□ 0.36
SDF2-201ENST00000247020 TRAPPC3LQ5T215 181 aa17.32■□□□□ 0.36
SDF2-201ENST00000247020 SYNE4Q8N205 404 aa17.32■□□□□ 0.36
SDF2-201ENST00000247020 BCL2L12Q9HB09 334 aa17.32■□□□□ 0.36
SDF2-201ENST00000247020 AKAP2Q9Y2D5 859 aa17.32■□□□□ 0.36
SDF2-201ENST00000247020 ARAP2Q8WZ64 1704 aa17.32■□□□□ 0.36
SDF2-201ENST00000247020 SSFA2P28290 1259 aa17.32■□□□□ 0.36
SDF2-201ENST00000247020 USPL1Q5W0Q7 1092 aa17.32■□□□□ 0.36
SDF2-201ENST00000247020 ARHGEF1Q92888 912 aaKnown RBP17.32■□□□□ 0.36
SDF2-201ENST00000247020 CCDC8Q9H0W5 538 aaPredicted RBP17.32■□□□□ 0.36
SDF2-201ENST00000247020 GREM2Q9H772 168 aa17.32■□□□□ 0.36
SDF2-201ENST00000247020 REC8O95072 547 aa17.31■□□□□ 0.36
SDF2-201ENST00000247020 RFC4P35249 363 aa17.31■□□□□ 0.36
SDF2-201ENST00000247020 CCDC152Q4G0S7 254 aa17.31■□□□□ 0.36
SDF2-201ENST00000247020 RILPL2Q969X0 211 aa17.31■□□□□ 0.36
SDF2-201ENST00000247020 CEP126Q9P2H0 1117 aa17.31■□□□□ 0.36
SDF2-201ENST00000247020 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.31■□□□□ 0.36
SDF2-201ENST00000247020 ATP5JP18859 108 aa17.3■□□□□ 0.36
SDF2-201ENST00000247020 CHMLP26374 656 aa17.3■□□□□ 0.36
SDF2-201ENST00000247020 LRRC24Q50LG9 513 aa17.3■□□□□ 0.36
SDF2-201ENST00000247020 SLC10A5Q5PT55 438 aa17.3■□□□□ 0.36
SDF2-201ENST00000247020 TICAM2Q86XR7 235 aa17.3■□□□□ 0.36
SDF2-201ENST00000247020 EVI5LQ96CN4 794 aa17.3■□□□□ 0.36
SDF2-201ENST00000247020 ZNF594Q96JF6 807 aaPredicted RBP17.3■□□□□ 0.36
SDF2-201ENST00000247020 DBNLQ9UJU6 430 aaKnown RBP17.3■□□□□ 0.36
SDF2-201ENST00000247020 TBC1D9BQ66K14 1250 aa17.29■□□□□ 0.36
SDF2-201ENST00000247020 SETDB2Q96T68 719 aa17.29■□□□□ 0.36
SDF2-201ENST00000247020 RIPOR2Q9Y4F9 1068 aa17.29■□□□□ 0.36
SDF2-201ENST00000247020 RIC1Q4ADV7 1423 aa17.29■□□□□ 0.36
SDF2-201ENST00000247020 RFX7Q2KHR2 1363 aa17.29■□□□□ 0.36
SDF2-201ENST00000247020 ABCC12Q96J65 1359 aa17.29■□□□□ 0.36
SDF2-201ENST00000247020 HIP1O00291 1037 aa17.28■□□□□ 0.36
SDF2-201ENST00000247020 TXNRD1Q16881 649 aa17.28■□□□□ 0.36
SDF2-201ENST00000247020 LDHAL6AQ6ZMR3 332 aa17.28■□□□□ 0.36
SDF2-201ENST00000247020 TLR7Q9NYK1 1049 aaKnown RBP17.28■□□□□ 0.36
SDF2-201ENST00000247020 RGS17Q9UGC6 210 aaPredicted RBP17.28■□□□□ 0.36
SDF2-201ENST00000247020 SF3B3Q15393 1217 aaKnown RBP17.28■□□□□ 0.36
SDF2-201ENST00000247020 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.28■□□□□ 0.36
SDF2-201ENST00000247020 ESYT1Q9BSJ8 1104 aa17.28■□□□□ 0.36
SDF2-201ENST00000247020 PUS3Q9BZE2 481 aaKnown RBP17.28■□□□□ 0.36
SDF2-201ENST00000247020 SRP68Q9UHB9 627 aaKnown RBP17.28■□□□□ 0.36
SDF2-201ENST00000247020 CARMIL3Q8ND23 1372 aa17.27■□□□□ 0.36
SDF2-201ENST00000247020 A0A1B0GUL6 1792 aa17.27■□□□□ 0.36
SDF2-201ENST00000247020 MROH5Q6ZUA9 1318 aa17.27■□□□□ 0.36
SDF2-201ENST00000247020 HCLS1P14317 486 aaPredicted RBP17.27■□□□□ 0.35
SDF2-201ENST00000247020 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP17.26■□□□□ 0.35
SDF2-201ENST00000247020 TPTE2Q6XPS3 522 aa17.26■□□□□ 0.35
SDF2-201ENST00000247020 DBNDD2Q9BQY9 259 aa17.26■□□□□ 0.35
SDF2-201ENST00000247020 USP26Q9BXU7 913 aa17.26■□□□□ 0.35
SDF2-201ENST00000247020 CNNM1Q9NRU3 951 aa17.26■□□□□ 0.35
SDF2-201ENST00000247020 A0A1B0GUL7 405 aa17.25■□□□□ 0.35
SDF2-201ENST00000247020 FAM177BA6PVY3 158 aa17.25■□□□□ 0.35
SDF2-201ENST00000247020 ERFEQ4G0M1 354 aa17.25■□□□□ 0.35
SDF2-201ENST00000247020 AMIGO3Q86WK7 504 aa17.25■□□□□ 0.35
SDF2-201ENST00000247020 PROM2Q8N271 834 aa17.25■□□□□ 0.35
SDF2-201ENST00000247020 RUFY2Q8WXA3 655 aa17.25■□□□□ 0.35
SDF2-201ENST00000247020 CCDC85AQ96PX6 553 aaPredicted RBP17.25■□□□□ 0.35
SDF2-201ENST00000247020 CDC5LQ99459 802 aaKnown RBP17.25■□□□□ 0.35
SDF2-201ENST00000247020 QSER1Q2KHR3 1735 aa17.24■□□□□ 0.35
SDF2-201ENST00000247020 BECN1Q14457 450 aa17.24■□□□□ 0.35
SDF2-201ENST00000247020 METTL24Q5JXM2 366 aa17.24■□□□□ 0.35
SDF2-201ENST00000247020 POTEAQ6S8J7 498 aa17.24■□□□□ 0.35
SDF2-201ENST00000247020 NBPF5PQ86XG9 351 aaPredicted RBP17.24■□□□□ 0.35
SDF2-201ENST00000247020 VGLL2Q8N8G2 317 aa17.24■□□□□ 0.35
SDF2-201ENST00000247020 RAD50Q92878 1312 aa17.24■□□□□ 0.35
SDF2-201ENST00000247020 PHF14O94880 888 aa17.23■□□□□ 0.35
SDF2-201ENST00000247020 APBA3O96018 575 aa17.23■□□□□ 0.35
SDF2-201ENST00000247020 GTF2E1P29083 439 aaPredicted RBP17.23■□□□□ 0.35
SDF2-201ENST00000247020 IGHMBP2P38935 993 aaKnown RBP17.23■□□□□ 0.35
SDF2-201ENST00000247020 NEUROD6Q96NK8 337 aa17.23■□□□□ 0.35
SDF2-201ENST00000247020 HAUS7Q99871 368 aa17.23■□□□□ 0.35
SDF2-201ENST00000247020 SGSM2O43147 1006 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 134.3 ms