RNA–Protein interactions for RNA: ENST00000229239.9

GAPDH-201, Transcript of glyceraldehyde-3-phosphate dehydrogenase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GAPDH, Length 1,875 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Exosome, Mitochondria, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPDH-201ENST00000229239 RFX7Q2KHR2 1363 aa20.33■□□□□ 0.84
GAPDH-201ENST00000229239 DOT1LQ8TEK3 1739 aa20.33■□□□□ 0.84
GAPDH-201ENST00000229239 ATP5J2-PTCD1G3V325 749 aa20.33■□□□□ 0.84
GAPDH-201ENST00000229239 PTCD1O75127 700 aaKnown RBP20.33■□□□□ 0.84
GAPDH-201ENST00000229239 CCDC8Q9H0W5 538 aaPredicted RBP20.33■□□□□ 0.84
GAPDH-201ENST00000229239 SIL1Q9H173 461 aa20.33■□□□□ 0.84
GAPDH-201ENST00000229239 TOGARAM1Q9Y4F4 1720 aa20.32■□□□□ 0.84
GAPDH-201ENST00000229239 ANO8Q9HCE9 1232 aaPredicted RBP20.32■□□□□ 0.84
GAPDH-201ENST00000229239 SNX14Q9Y5W7 946 aa20.32■□□□□ 0.84
GAPDH-201ENST00000229239 FSD2A1L4K1 749 aa20.31■□□□□ 0.84
GAPDH-201ENST00000229239 ATP5JP18859 108 aa20.31■□□□□ 0.84
GAPDH-201ENST00000229239 ATG3Q9NT62 314 aa20.31■□□□□ 0.84
GAPDH-201ENST00000229239 GOLGA6L3A6NEY3 463 aa20.3■□□□□ 0.84
GAPDH-201ENST00000229239 A1BGP04217 495 aa20.3■□□□□ 0.84
GAPDH-201ENST00000229239 FOXO4P98177 505 aa20.3■□□□□ 0.84
GAPDH-201ENST00000229239 TNNI3KQ59H18 835 aa20.3■□□□□ 0.84
GAPDH-201ENST00000229239 TTLL7Q6ZT98 887 aa20.3■□□□□ 0.84
GAPDH-201ENST00000229239 ZGPATQ8N5A5 531 aaKnown RBP20.3■□□□□ 0.84
GAPDH-201ENST00000229239 TM6SF1Q9BZW5 370 aa20.3■□□□□ 0.84
GAPDH-201ENST00000229239 FPGT-TNNI3KV9GXZ4 949 aa20.3■□□□□ 0.84
GAPDH-201ENST00000229239 GPR108Q9NPR9 543 aa20.3■□□□□ 0.84
GAPDH-201ENST00000229239 KLHDC4Q8TBB5 520 aa20.29■□□□□ 0.84
GAPDH-201ENST00000229239 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.29■□□□□ 0.84
GAPDH-201ENST00000229239 CASZ1Q86V15 1759 aa20.29■□□□□ 0.84
GAPDH-201ENST00000229239 CCDC171Q6TFL3 1326 aa20.28■□□□□ 0.84
GAPDH-201ENST00000229239 TRIM28Q13263 835 aaKnown RBP20.28■□□□□ 0.84
GAPDH-201ENST00000229239 LMBR1LQ6UX01 489 aa20.28■□□□□ 0.84
GAPDH-201ENST00000229239 TTC14Q96N46 770 aa20.28■□□□□ 0.84
GAPDH-201ENST00000229239 LRRC4BQ9NT99 713 aa20.28■□□□□ 0.84
GAPDH-201ENST00000229239 STK32BQ9NY57 414 aa20.28■□□□□ 0.84
GAPDH-201ENST00000229239 TLR7Q9NYK1 1049 aaKnown RBP20.28■□□□□ 0.84
GAPDH-201ENST00000229239 TJP1Q07157 1748 aa20.28■□□□□ 0.84
GAPDH-201ENST00000229239 SLC27A3Q5K4L6 730 aa20.28■□□□□ 0.84
GAPDH-201ENST00000229239 ISCA1Q9BUE6 129 aa20.28■□□□□ 0.84
GAPDH-201ENST00000229239 UPF3BQ9BZI7 483 aaKnown RBP20.28■□□□□ 0.84
GAPDH-201ENST00000229239 TFCP2Q12800 502 aa20.27■□□□□ 0.84
GAPDH-201ENST00000229239 SLC15A2Q16348 729 aa20.27■□□□□ 0.84
GAPDH-201ENST00000229239 FSD1Q9BTV5 496 aa20.27■□□□□ 0.84
GAPDH-201ENST00000229239 BOLA2Q9H3K6 86 aa20.27■□□□□ 0.84
GAPDH-201ENST00000229239 STARD3NLO95772 234 aa20.26■□□□□ 0.83
GAPDH-201ENST00000229239 ZKSCAN1P17029 563 aaPredicted RBP20.26■□□□□ 0.83
GAPDH-201ENST00000229239 KLHL40Q2TBA0 621 aa20.26■□□□□ 0.83
GAPDH-201ENST00000229239 DBNLQ9UJU6 430 aaKnown RBP20.26■□□□□ 0.83
GAPDH-201ENST00000229239 CIAO1O76071 339 aa20.26■□□□□ 0.83
GAPDH-201ENST00000229239 IL15P40933 162 aaPredicted RBP20.26■□□□□ 0.83
GAPDH-201ENST00000229239 TCIRG1Q13488 830 aa20.26■□□□□ 0.83
GAPDH-201ENST00000229239 NECTIN1Q15223 517 aa20.26■□□□□ 0.83
GAPDH-201ENST00000229239 PIGBQ92521 554 aa20.26■□□□□ 0.83
GAPDH-201ENST00000229239 MAP4K1Q92918 833 aa20.26■□□□□ 0.83
GAPDH-201ENST00000229239 FBXO3Q9UK99 471 aa20.26■□□□□ 0.83
GAPDH-201ENST00000229239 MED23Q9ULK4 1368 aa20.25■□□□□ 0.83
GAPDH-201ENST00000229239 MRE11P49959 708 aa20.25■□□□□ 0.83
GAPDH-201ENST00000229239 NMIQ13287 307 aaPredicted RBP20.25■□□□□ 0.83
GAPDH-201ENST00000229239 ZBTB3Q9H5J0 574 aa20.25■□□□□ 0.83
GAPDH-201ENST00000229239 LY75O60449 1722 aa20.25■□□□□ 0.83
GAPDH-201ENST00000229239 BRD1O95696 1058 aa20.24■□□□□ 0.83
GAPDH-201ENST00000229239 VPS53Q5VIR6 699 aa20.24■□□□□ 0.83
GAPDH-201ENST00000229239 KIF6Q6ZMV9 814 aa20.24■□□□□ 0.83
GAPDH-201ENST00000229239 RASEFQ8IZ41 740 aa20.24■□□□□ 0.83
GAPDH-201ENST00000229239 JARID2Q92833 1246 aaPredicted RBP20.24■□□□□ 0.83
GAPDH-201ENST00000229239 GZF1Q9H116 711 aaPredicted RBP20.24■□□□□ 0.83
GAPDH-201ENST00000229239 LIMCH1Q9UPQ0 1083 aa20.24■□□□□ 0.83
GAPDH-201ENST00000229239 ZDHHC9Q9Y397 364 aa20.24■□□□□ 0.83
GAPDH-201ENST00000229239 KCNQ4P56696 695 aa20.24■□□□□ 0.83
GAPDH-201ENST00000229239 PTH1RQ03431 593 aa20.24■□□□□ 0.83
GAPDH-201ENST00000229239 RNF20Q5VTR2 975 aa20.24■□□□□ 0.83
GAPDH-201ENST00000229239 ZSWIM6Q9HCJ5 1215 aa20.24■□□□□ 0.83
GAPDH-201ENST00000229239 PDIA4P13667 645 aaKnown RBP20.23■□□□□ 0.83
GAPDH-201ENST00000229239 PKP1Q13835 747 aa20.23■□□□□ 0.83
GAPDH-201ENST00000229239 ZSCAN31Q96LW9 406 aaPredicted RBP20.23■□□□□ 0.83
GAPDH-201ENST00000229239 HAUS7Q99871 368 aa20.23■□□□□ 0.83
GAPDH-201ENST00000229239 CCNL1Q9UK58 526 aaPredicted RBP20.23■□□□□ 0.83
GAPDH-201ENST00000229239 PSMA5P28066 241 aa20.22■□□□□ 0.83
GAPDH-201ENST00000229239 FAM227BQ96M60 508 aa20.22■□□□□ 0.83
GAPDH-201ENST00000229239 PLA2G12BQ9BX93 195 aa20.22■□□□□ 0.83
GAPDH-201ENST00000229239 HMG20BQ9P0W2 317 aa20.22■□□□□ 0.83
GAPDH-201ENST00000229239 ZSCAN21Q9Y5A6 473 aaPredicted RBP20.22■□□□□ 0.83
GAPDH-201ENST00000229239 MCTP1Q6DN14 999 aa20.22■□□□□ 0.83
GAPDH-201ENST00000229239 PRPF40BQ6NWY9 871 aaKnown RBP20.22■□□□□ 0.83
GAPDH-201ENST00000229239 ATG9AQ7Z3C6 839 aa20.22■□□□□ 0.83
GAPDH-201ENST00000229239 ASAP1Q9ULH1 1129 aa20.22■□□□□ 0.83
GAPDH-201ENST00000229239 RBM8AQ9Y5S9 174 aaKnown RBP20.22■□□□□ 0.83
GAPDH-201ENST00000229239 CYP46A1Q9Y6A2 500 aa20.22■□□□□ 0.83
GAPDH-201ENST00000229239 ITGB4P16144 1822 aa20.21■□□□□ 0.83
GAPDH-201ENST00000229239 EYA2O00167 538 aa20.21■□□□□ 0.83
GAPDH-201ENST00000229239 PCCAP05165 728 aaPredicted RBP20.21■□□□□ 0.83
GAPDH-201ENST00000229239 AK2P54819 239 aa20.21■□□□□ 0.83
GAPDH-201ENST00000229239 HSP90AB3PQ58FF7 597 aa20.21■□□□□ 0.83
GAPDH-201ENST00000229239 DNAJC10Q8IXB1 793 aa20.21■□□□□ 0.83
GAPDH-201ENST00000229239 SMARCC1Q92922 1105 aaPredicted RBP20.21■□□□□ 0.83
GAPDH-201ENST00000229239 PDGFDQ9GZP0 370 aaPredicted RBP20.21■□□□□ 0.83
GAPDH-201ENST00000229239 SH2B1Q9NRF2 756 aaPredicted RBP20.21■□□□□ 0.83
GAPDH-201ENST00000229239 CHMP3Q9Y3E7 222 aa20.21■□□□□ 0.83
GAPDH-201ENST00000229239 CASTP20810 708 aaKnown RBP20.2■□□□□ 0.82
GAPDH-201ENST00000229239 ZNF827Q17R98 1081 aa20.2■□□□□ 0.82
GAPDH-201ENST00000229239 TSGA10IPQ3SY00 556 aa20.2■□□□□ 0.82
GAPDH-201ENST00000229239 CREB3L3Q68CJ9 461 aa20.2■□□□□ 0.82
GAPDH-201ENST00000229239 LMBRD1Q9NUN5 540 aa20.2■□□□□ 0.82
GAPDH-201ENST00000229239 DDX49Q9Y6V7 483 aaKnown RBP20.2■□□□□ 0.82
GAPDH-201ENST00000229239 PALLDQ8WX93 1383 aa20.2■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms