RNA–Protein interactions for RNA: ENST00000228827.7

GPN3-201, Transcript of GPN-loop GTPase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPN3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-201ENST00000228827 DPP8Q6V1X1 898 aaPredicted RBP18.26■□□□□ 0.51
GPN3-201ENST00000228827 KSR2Q6VAB6 950 aa18.26■□□□□ 0.51
GPN3-201ENST00000228827 SP8Q8IXZ3 490 aa18.26■□□□□ 0.51
GPN3-201ENST00000228827 CCDC191Q8NCU4 936 aa18.26■□□□□ 0.51
GPN3-201ENST00000228827 DICER1Q9UPY3 1922 aaKnown RBP18.26■□□□□ 0.51
GPN3-201ENST00000228827 COL4A5P29400 1685 aa18.26■□□□□ 0.51
GPN3-201ENST00000228827 POTEIP0CG38 1075 aa18.26■□□□□ 0.51
GPN3-201ENST00000228827 POTEJP0CG39 1038 aa18.26■□□□□ 0.51
GPN3-201ENST00000228827 CELF1Q92879 486 aaKnown RBP18.26■□□□□ 0.51
GPN3-201ENST00000228827 L3MBTL3Q96JM7 780 aaPredicted RBP18.26■□□□□ 0.51
GPN3-201ENST00000228827 GJA3Q9Y6H8 435 aa18.26■□□□□ 0.51
GPN3-201ENST00000228827 LAMB2P55268 1798 aa18.25■□□□□ 0.51
GPN3-201ENST00000228827 IQCA1LA6NCM1 817 aa18.25■□□□□ 0.51
GPN3-201ENST00000228827 PCCAP05165 728 aaPredicted RBP18.25■□□□□ 0.51
GPN3-201ENST00000228827 EIF6P56537 245 aaKnown RBP18.25■□□□□ 0.51
GPN3-201ENST00000228827 MPNDQ8N594 471 aa18.25■□□□□ 0.51
GPN3-201ENST00000228827 CEP350Q5VT06 3117 aa18.24■□□□□ 0.51
GPN3-201ENST00000228827 IGKV5-2P06315 115 aa18.24■□□□□ 0.51
GPN3-201ENST00000228827 NIM1KQ8IY84 436 aa18.24■□□□□ 0.51
GPN3-201ENST00000228827 SUPT20HQ8NEM7 779 aa18.24■□□□□ 0.51
GPN3-201ENST00000228827 CCDC85AQ96PX6 553 aaPredicted RBP18.24■□□□□ 0.51
GPN3-201ENST00000228827 DDX60Q8IY21 1712 aaKnown RBP18.23■□□□□ 0.51
GPN3-201ENST00000228827 VAMP4O75379 141 aa18.23■□□□□ 0.51
GPN3-201ENST00000228827 NEXNQ0ZGT2 675 aa18.23■□□□□ 0.51
GPN3-201ENST00000228827 CWF19L2Q2TBE0 894 aaKnown RBP18.23■□□□□ 0.51
GPN3-201ENST00000228827 GPC2Q8N158 579 aa18.23■□□□□ 0.51
GPN3-201ENST00000228827 RTFDC1Q9BY42 306 aaPredicted RBP18.23■□□□□ 0.51
GPN3-201ENST00000228827 TAF1DQ9H5J8 278 aaPredicted RBP18.23■□□□□ 0.51
GPN3-201ENST00000228827 HACL1Q9UJ83 578 aa18.23■□□□□ 0.51
GPN3-201ENST00000228827 FLIIQ13045 1269 aa18.22■□□□□ 0.51
GPN3-201ENST00000228827 EAPPQ56P03 285 aaPredicted RBP18.22■□□□□ 0.51
GPN3-201ENST00000228827 TMC4Q7Z404 712 aa18.22■□□□□ 0.51
GPN3-201ENST00000228827 MYH16Q9H6N6 1097 aa18.22■□□□□ 0.51
GPN3-201ENST00000228827 SEC31BQ9NQW1 1179 aa18.22■□□□□ 0.51
GPN3-201ENST00000228827 HSP90B1P14625 803 aaKnown RBP18.21■□□□□ 0.51
GPN3-201ENST00000228827 FKBP5Q13451 457 aaPredicted RBP18.21■□□□□ 0.51
GPN3-201ENST00000228827 CHADLQ6NUI6 762 aa18.21■□□□□ 0.51
GPN3-201ENST00000228827 PDE8AO60658 829 aa18.2■□□□□ 0.5
GPN3-201ENST00000228827 EPHX2P34913 555 aa18.2■□□□□ 0.5
GPN3-201ENST00000228827 CCDC152Q4G0S7 254 aa18.2■□□□□ 0.5
GPN3-201ENST00000228827 NSFL1CQ9UNZ2 370 aaKnown RBP18.2■□□□□ 0.5
GPN3-201ENST00000228827 COL4A1P02462 1669 aa18.2■□□□□ 0.5
GPN3-201ENST00000228827 NEURL1BA8MQ27 555 aa18.2■□□□□ 0.5
GPN3-201ENST00000228827 RPS8P62241 208 aaKnown RBP18.2■□□□□ 0.5
GPN3-201ENST00000228827 KIAA2012Q0VF49 1180 aa18.2■□□□□ 0.5
GPN3-201ENST00000228827 VPS33BQ9H267 617 aa18.2■□□□□ 0.5
GPN3-201ENST00000228827 CLEC11AQ9Y240 323 aa18.2■□□□□ 0.5
GPN3-201ENST00000228827 GPSM2P81274 684 aa18.19■□□□□ 0.5
GPN3-201ENST00000228827 DNAJC5GQ8N7S2 189 aa18.19■□□□□ 0.5
GPN3-201ENST00000228827 DNAAF4Q8WXU2 420 aa18.19■□□□□ 0.5
GPN3-201ENST00000228827 C6orf229H3BNL8 230 aa18.18■□□□□ 0.5
GPN3-201ENST00000228827 LDHDQ86WU2 507 aa18.18■□□□□ 0.5
GPN3-201ENST00000228827 ZNRF3Q9ULT6 936 aa18.18■□□□□ 0.5
GPN3-201ENST00000228827 CDHR2Q9BYE9 1310 aa18.17■□□□□ 0.5
GPN3-201ENST00000228827 RIMBP2O15034 1052 aa18.17■□□□□ 0.5
GPN3-201ENST00000228827 LMOD1P29536 600 aaPredicted RBP18.17■□□□□ 0.5
GPN3-201ENST00000228827 CTSWP56202 376 aa18.17■□□□□ 0.5
GPN3-201ENST00000228827 CXCL9Q07325 125 aa18.17■□□□□ 0.5
GPN3-201ENST00000228827 GPR101Q96P66 508 aaPredicted RBP18.17■□□□□ 0.5
GPN3-201ENST00000228827 TAF1P21675 1872 aa18.17■□□□□ 0.5
GPN3-201ENST00000228827 ZNF521Q96K83 1311 aa18.17■□□□□ 0.5
GPN3-201ENST00000228827 RAD17O75943 681 aa18.16■□□□□ 0.5
GPN3-201ENST00000228827 EPS15P42566 896 aa18.16■□□□□ 0.5
GPN3-201ENST00000228827 SCNN1DP51172 638 aa18.16■□□□□ 0.5
GPN3-201ENST00000228827 WASHC4Q2M389 1173 aa18.16■□□□□ 0.5
GPN3-201ENST00000228827 UBE3BQ7Z3V4 1068 aa18.16■□□□□ 0.5
GPN3-201ENST00000228827 POLLQ9UGP5 575 aa18.16■□□□□ 0.5
GPN3-201ENST00000228827 DUOX1Q9NRD9 1551 aa18.16■□□□□ 0.5
GPN3-201ENST00000228827 F6X3S4 739 aa18.15■□□□□ 0.5
GPN3-201ENST00000228827 GCKRQ14397 625 aa18.15■□□□□ 0.5
GPN3-201ENST00000228827 PNMA8AQ86V59 439 aaPredicted RBP18.15■□□□□ 0.5
GPN3-201ENST00000228827 H7C1W4 665 aa18.14■□□□□ 0.5
GPN3-201ENST00000228827 CIAPIN1Q6FI81 312 aa18.14■□□□□ 0.5
GPN3-201ENST00000228827 ANKRD18AQ8IVF6 992 aa18.14■□□□□ 0.5
GPN3-201ENST00000228827 KLRG1Q96E93 195 aa18.14■□□□□ 0.5
GPN3-201ENST00000228827 DBNDD1Q9H9R9 158 aa18.14■□□□□ 0.5
GPN3-201ENST00000228827 ANKIB1Q9P2G1 1089 aa18.14■□□□□ 0.5
GPN3-201ENST00000228827 LRRC37AA6NMS7 1700 aa18.14■□□□□ 0.49
GPN3-201ENST00000228827 YDJCA8MPS7 323 aa18.14■□□□□ 0.49
GPN3-201ENST00000228827 MAP1SQ66K74 1059 aaPredicted RBP18.14■□□□□ 0.49
GPN3-201ENST00000228827 LINS1Q8NG48 757 aa18.14■□□□□ 0.49
GPN3-201ENST00000228827 TTLL11Q8NHH1 800 aa18.14■□□□□ 0.49
GPN3-201ENST00000228827 TBC1D16Q8TBP0 767 aa18.14■□□□□ 0.49
GPN3-201ENST00000228827 GREM2Q9H772 168 aa18.14■□□□□ 0.49
GPN3-201ENST00000228827 SCN4AP35499 1836 aa18.13■□□□□ 0.49
GPN3-201ENST00000228827 UFL1O94874 794 aa18.13■□□□□ 0.49
GPN3-201ENST00000228827 GMPSP49915 693 aaPredicted RBP18.13■□□□□ 0.49
GPN3-201ENST00000228827 DOK7Q18PE1 504 aa18.13■□□□□ 0.49
GPN3-201ENST00000228827 EYA3Q99504 573 aa18.13■□□□□ 0.49
GPN3-201ENST00000228827 CDC5LQ99459 802 aaKnown RBP18.12■□□□□ 0.49
GPN3-201ENST00000228827 BCL2L13Q9BXK5 485 aa18.12■□□□□ 0.49
GPN3-201ENST00000228827 GGA1Q9UJY5 639 aa18.12■□□□□ 0.49
GPN3-201ENST00000228827 LTBP1Q14766 1721 aa18.11■□□□□ 0.49
GPN3-201ENST00000228827 TNIP1Q15025 636 aa18.11■□□□□ 0.49
GPN3-201ENST00000228827 PODXL2Q9NZ53 605 aa18.11■□□□□ 0.49
GPN3-201ENST00000228827 GPRC5DQ9NZD1 345 aa18.11■□□□□ 0.49
GPN3-201ENST00000228827 E9PSI1 815 aa18.1■□□□□ 0.49
GPN3-201ENST00000228827 ECE2O60344 883 aa18.1■□□□□ 0.49
GPN3-201ENST00000228827 CASP7P55210 303 aa18.1■□□□□ 0.49
GPN3-201ENST00000228827 BEND3Q5T5X7 828 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms