RNA–Protein interactions for RNA: ENST00000225441.11

RUNDC3A-201, Transcript of RUN domain containing 3A, humanhuman

TSL 1 (best) BASIC

Gene RUNDC3A, Length 1,821 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNDC3A-201ENST00000225441 ZBTB4Q9P1Z0 1013 aaPredicted RBP29.95■■■□□ 2.39
RUNDC3A-201ENST00000225441 COL5A3P25940 1745 aaPredicted RBP29.95■■■□□ 2.39
RUNDC3A-201ENST00000225441 NUP188Q5SRE5 1749 aa29.95■■■□□ 2.39
RUNDC3A-201ENST00000225441 MYD88Q99836 296 aa29.94■■■□□ 2.38
RUNDC3A-201ENST00000225441 ZNF330Q9Y3S2 320 aaPredicted RBP29.94■■■□□ 2.38
RUNDC3A-201ENST00000225441 UTYO14607 1347 aa29.94■■■□□ 2.38
RUNDC3A-201ENST00000225441 IL6STP40189 918 aaPredicted RBP29.94■■■□□ 2.38
RUNDC3A-201ENST00000225441 CRKLP46109 303 aaKnown RBP29.94■■■□□ 2.38
RUNDC3A-201ENST00000225441 CWF19L2Q2TBE0 894 aaKnown RBP29.94■■■□□ 2.38
RUNDC3A-201ENST00000225441 INTS5Q6P9B9 1019 aaKnown RBP29.94■■■□□ 2.38
RUNDC3A-201ENST00000225441 ZSCAN30Q86W11 494 aa29.94■■■□□ 2.38
RUNDC3A-201ENST00000225441 IGKV5-2P06315 115 aa29.93■■■□□ 2.38
RUNDC3A-201ENST00000225441 PDLIM2Q96JY6 352 aa29.93■■■□□ 2.38
RUNDC3A-201ENST00000225441 TTC14Q96N46 770 aa29.93■■■□□ 2.38
RUNDC3A-201ENST00000225441 ECHDC1Q9NTX5 307 aa29.92■■■□□ 2.38
RUNDC3A-201ENST00000225441 SNX14Q9Y5W7 946 aa29.92■■■□□ 2.38
RUNDC3A-201ENST00000225441 LY75O60449 1722 aa29.92■■■□□ 2.38
RUNDC3A-201ENST00000225441 TMEM87AQ8NBN3 555 aa29.92■■■□□ 2.38
RUNDC3A-201ENST00000225441 KCNB2Q92953 911 aa29.92■■■□□ 2.38
RUNDC3A-201ENST00000225441 TM6SF1Q9BZW5 370 aa29.92■■■□□ 2.38
RUNDC3A-201ENST00000225441 C9orf78Q9NZ63 289 aaPredicted RBP29.92■■■□□ 2.38
RUNDC3A-201ENST00000225441 ZSCAN21Q9Y5A6 473 aaPredicted RBP29.92■■■□□ 2.38
RUNDC3A-201ENST00000225441 HIP1O00291 1037 aa29.91■■■□□ 2.38
RUNDC3A-201ENST00000225441 PHF14O94880 888 aa29.91■■■□□ 2.38
RUNDC3A-201ENST00000225441 OS9Q13438 667 aaPredicted RBP29.91■■■□□ 2.38
RUNDC3A-201ENST00000225441 ZBTB3Q9H5J0 574 aa29.91■■■□□ 2.38
RUNDC3A-201ENST00000225441 NEURL1BA8MQ27 555 aa29.9■■■□□ 2.38
RUNDC3A-201ENST00000225441 PDIA4P13667 645 aaKnown RBP29.9■■■□□ 2.38
RUNDC3A-201ENST00000225441 KIF6Q6ZMV9 814 aa29.9■■■□□ 2.38
RUNDC3A-201ENST00000225441 RBSNQ9H1K0 784 aa29.9■■■□□ 2.38
RUNDC3A-201ENST00000225441 LIMCH1Q9UPQ0 1083 aa29.9■■■□□ 2.38
RUNDC3A-201ENST00000225441 LINC00116Q8NCU8 138 aa29.89■■■□□ 2.38
RUNDC3A-201ENST00000225441 UPF3BQ9BZI7 483 aaKnown RBP29.89■■■□□ 2.38
RUNDC3A-201ENST00000225441 DIAPH3Q9NSV4 1193 aa29.89■■■□□ 2.38
RUNDC3A-201ENST00000225441 TMEM63CQ9P1W3 806 aa29.89■■■□□ 2.38
RUNDC3A-201ENST00000225441 EIF5P55010 431 aaKnown RBP29.88■■■□□ 2.37
RUNDC3A-201ENST00000225441 EVI5LQ96CN4 794 aa29.88■■■□□ 2.37
RUNDC3A-201ENST00000225441 IL25Q9H293 177 aa29.88■■■□□ 2.37
RUNDC3A-201ENST00000225441 TRIM37O94972 964 aa29.87■■■□□ 2.37
RUNDC3A-201ENST00000225441 ZSCAN31Q96LW9 406 aaPredicted RBP29.87■■■□□ 2.37
RUNDC3A-201ENST00000225441 CCNL1Q9UK58 526 aaPredicted RBP29.87■■■□□ 2.37
RUNDC3A-201ENST00000225441 KCNQ4P56696 695 aa29.87■■■□□ 2.37
RUNDC3A-201ENST00000225441 MAP3K15Q6ZN16 1313 aa29.86■■■□□ 2.37
RUNDC3A-201ENST00000225441 GCKRQ14397 625 aa29.86■■■□□ 2.37
RUNDC3A-201ENST00000225441 ATP6V1DQ9Y5K8 247 aa29.86■■■□□ 2.37
RUNDC3A-201ENST00000225441 MYH14Q7Z406 1995 aaKnown RBP29.86■■■□□ 2.37
RUNDC3A-201ENST00000225441 CNTNAP4Q9C0A0 1308 aa29.86■■■□□ 2.37
RUNDC3A-201ENST00000225441 GRM8O00222 908 aa29.85■■■□□ 2.37
RUNDC3A-201ENST00000225441 IFIT2P09913 472 aaKnown RBP29.85■■■□□ 2.37
RUNDC3A-201ENST00000225441 ATP5J2-PTCD1G3V325 749 aa29.85■■■□□ 2.37
RUNDC3A-201ENST00000225441 AFDNP55196 1824 aaKnown RBP29.84■■■□□ 2.37
RUNDC3A-201ENST00000225441 MCM5P33992 734 aa29.84■■■□□ 2.37
RUNDC3A-201ENST00000225441 VPS53Q5VIR6 699 aa29.84■■■□□ 2.37
RUNDC3A-201ENST00000225441 SH2B1Q9NRF2 756 aaPredicted RBP29.84■■■□□ 2.37
RUNDC3A-201ENST00000225441 SNRKQ9NRH2 765 aa29.84■■■□□ 2.37
RUNDC3A-201ENST00000225441 DZIP3Q86Y13 1208 aaKnown RBP29.83■■■□□ 2.37
RUNDC3A-201ENST00000225441 RBM27Q9P2N5 1060 aaKnown RBP29.83■■■□□ 2.37
RUNDC3A-201ENST00000225441 NAP1L5Q96NT1 182 aaPredicted RBP29.82■■■□□ 2.36
RUNDC3A-201ENST00000225441 LETM1O95202 739 aaPredicted RBP29.82■■■□□ 2.36
RUNDC3A-201ENST00000225441 MAP4K4O95819 1239 aaPredicted RBP29.82■■■□□ 2.36
RUNDC3A-201ENST00000225441 CWC27Q6UX04 472 aaKnown RBP29.82■■■□□ 2.36
RUNDC3A-201ENST00000225441 MSNP26038 577 aaKnown RBP29.81■■■□□ 2.36
RUNDC3A-201ENST00000225441 TCIRG1Q13488 830 aa29.81■■■□□ 2.36
RUNDC3A-201ENST00000225441 RC3H1Q5TC82 1133 aaKnown RBP29.81■■■□□ 2.36
RUNDC3A-201ENST00000225441 AK2P54819 239 aa29.8■■■□□ 2.36
RUNDC3A-201ENST00000225441 CSPP1Q1MSJ5 1256 aa29.8■■■□□ 2.36
RUNDC3A-201ENST00000225441 GIGYF2Q6Y7W6 1299 aaKnown RBP29.8■■■□□ 2.36
RUNDC3A-201ENST00000225441 ISCA1Q9BUE6 129 aa29.8■■■□□ 2.36
RUNDC3A-201ENST00000225441 TBC1D2BQ9UPU7 963 aa29.8■■■□□ 2.36
RUNDC3A-201ENST00000225441 RPAP1Q9BWH6 1393 aaPredicted RBP29.8■■■□□ 2.36
RUNDC3A-201ENST00000225441 SYCE3A1L190 88 aa29.8■■■□□ 2.36
RUNDC3A-201ENST00000225441 ERVV-1B6SEH8 477 aa29.8■■■□□ 2.36
RUNDC3A-201ENST00000225441 ZSCAN22P10073 491 aaPredicted RBP29.8■■■□□ 2.36
RUNDC3A-201ENST00000225441 FAM184AQ8NB25 1140 aa29.8■■■□□ 2.36
RUNDC3A-201ENST00000225441 ZSWIM6Q9HCJ5 1215 aa29.8■■■□□ 2.36
RUNDC3A-201ENST00000225441 TAF1LQ8IZX4 1826 aa29.79■■■□□ 2.36
RUNDC3A-201ENST00000225441 G3BP1Q13283 466 aaKnown RBP eCLIP29.79■■■□□ 2.36
RUNDC3A-201ENST00000225441 RASEFQ8IZ41 740 aa29.79■■■□□ 2.36
RUNDC3A-201ENST00000225441 TSPY26PQ9H489 355 aa29.79■■■□□ 2.36
RUNDC3A-201ENST00000225441 NOL7Q9UMY1 257 aaKnown RBP29.79■■■□□ 2.36
RUNDC3A-201ENST00000225441 COL15A1P39059 1388 aa29.79■■■□□ 2.36
RUNDC3A-201ENST00000225441 NOL8Q76FK4 1167 aaKnown RBP29.78■■■□□ 2.36
RUNDC3A-201ENST00000225441 RUFY3Q7L099 469 aa29.78■■■□□ 2.36
RUNDC3A-201ENST00000225441 CCDC191Q8NCU4 936 aa29.78■■■□□ 2.36
RUNDC3A-201ENST00000225441 CWC25Q9NXE8 425 aaPredicted RBP29.78■■■□□ 2.36
RUNDC3A-201ENST00000225441 HLFQ16534 295 aa29.78■■■□□ 2.36
RUNDC3A-201ENST00000225441 NSFL1CQ9UNZ2 370 aaKnown RBP29.78■■■□□ 2.36
RUNDC3A-201ENST00000225441 SMC3Q9UQE7 1217 aa29.78■■■□□ 2.36
RUNDC3A-201ENST00000225441 ZKSCAN1P17029 563 aaPredicted RBP29.77■■■□□ 2.36
RUNDC3A-201ENST00000225441 TRIM28Q13263 835 aaKnown RBP29.77■■■□□ 2.36
RUNDC3A-201ENST00000225441 UVSSAQ2YD98 709 aa29.77■■■□□ 2.36
RUNDC3A-201ENST00000225441 HSP90AB3PQ58FF7 597 aa29.77■■■□□ 2.36
RUNDC3A-201ENST00000225441 FOXD4L5Q5VV16 416 aaPredicted RBP29.77■■■□□ 2.36
RUNDC3A-201ENST00000225441 FOXD4L4Q8WXT5 416 aaPredicted RBP29.77■■■□□ 2.36
RUNDC3A-201ENST00000225441 A0A087WZG4 1122 aa29.76■■■□□ 2.35
RUNDC3A-201ENST00000225441 TERF1P54274 439 aa29.76■■■□□ 2.35
RUNDC3A-201ENST00000225441 SUCLG2Q96I99 432 aa29.76■■■□□ 2.35
RUNDC3A-201ENST00000225441 CYP46A1Q9Y6A2 500 aa29.76■■■□□ 2.35
RUNDC3A-201ENST00000225441 STX6O43752 255 aa29.75■■■□□ 2.35
RUNDC3A-201ENST00000225441 NECTIN1Q15223 517 aa29.75■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms