RNA–Protein interactions for RNA: ENST00000223127.7

PLOD3-201, Transcript of procollagen-lysine,2-oxoglutarate 5-dioxygenase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PLOD3, Length 2,920 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLOD3-201ENST00000223127 FOXD4L5Q5VV16 416 aaPredicted RBP15.72■□□□□ 0.11
PLOD3-201ENST00000223127 FOXD4L4Q8WXT5 416 aaPredicted RBP15.72■□□□□ 0.11
PLOD3-201ENST00000223127 THRAP3Q9Y2W1 955 aaKnown RBP15.72■□□□□ 0.11
PLOD3-201ENST00000223127 GLRX3O76003 335 aaKnown RBP15.72■□□□□ 0.11
PLOD3-201ENST00000223127 CYP19A1P11511 503 aaPredicted RBP15.72■□□□□ 0.11
PLOD3-201ENST00000223127 GPTP24298 496 aa15.72■□□□□ 0.11
PLOD3-201ENST00000223127 CCDC191Q8NCU4 936 aa15.72■□□□□ 0.11
PLOD3-201ENST00000223127 CCDC85AQ96PX6 553 aaPredicted RBP15.72■□□□□ 0.11
PLOD3-201ENST00000223127 ITGB4P16144 1822 aa15.72■□□□□ 0.11
PLOD3-201ENST00000223127 RFX5P48382 616 aaPredicted RBP15.71■□□□□ 0.11
PLOD3-201ENST00000223127 FOXO4P98177 505 aa15.71■□□□□ 0.11
PLOD3-201ENST00000223127 RABL6Q3YEC7 729 aaPredicted RBP15.71■□□□□ 0.11
PLOD3-201ENST00000223127 MTERF4Q7Z6M4 381 aaKnown RBP15.71■□□□□ 0.11
PLOD3-201ENST00000223127 CNTROBQ8N137 903 aa15.71■□□□□ 0.11
PLOD3-201ENST00000223127 GPATCH3Q96I76 525 aa15.71■□□□□ 0.11
PLOD3-201ENST00000223127 MBD3O95983 291 aa15.71■□□□□ 0.11
PLOD3-201ENST00000223127 TCIRG1Q13488 830 aa15.71■□□□□ 0.11
PLOD3-201ENST00000223127 HLFQ16534 295 aa15.71■□□□□ 0.11
PLOD3-201ENST00000223127 TFCP2Q12800 502 aa15.71■□□□□ 0.1
PLOD3-201ENST00000223127 FAM89AQ96GI7 184 aa15.71■□□□□ 0.1
PLOD3-201ENST00000223127 COPRSQ9NQ92 184 aa15.71■□□□□ 0.1
PLOD3-201ENST00000223127 TBC1D2BQ9UPU7 963 aa15.71■□□□□ 0.1
PLOD3-201ENST00000223127 TTC41PQ6P2S7 1318 aa15.7■□□□□ 0.1
PLOD3-201ENST00000223127 SMAP1Q8IYB5 467 aaPredicted RBP15.7■□□□□ 0.1
PLOD3-201ENST00000223127 KCNQ2O43526 872 aa15.7■□□□□ 0.1
PLOD3-201ENST00000223127 CWC27Q6UX04 472 aaKnown RBP15.7■□□□□ 0.1
PLOD3-201ENST00000223127 ZNF594Q96JF6 807 aaPredicted RBP15.69■□□□□ 0.1
PLOD3-201ENST00000223127 BOLA2Q9H3K6 86 aa15.69■□□□□ 0.1
PLOD3-201ENST00000223127 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.69■□□□□ 0.12e-7■□□□□ 8.1
PLOD3-201ENST00000223127 SYNE4Q8N205 404 aa15.69■□□□□ 0.1
PLOD3-201ENST00000223127 ISCA1Q9BUE6 129 aa15.69■□□□□ 0.1
PLOD3-201ENST00000223127 ATP6V1AP38606 617 aa15.68■□□□□ 0.1
PLOD3-201ENST00000223127 TMX3Q96JJ7 454 aa15.68■□□□□ 0.1
PLOD3-201ENST00000223127 TSPY26PQ9H489 355 aa15.68■□□□□ 0.1
PLOD3-201ENST00000223127 MAP3K15Q6ZN16 1313 aa15.68■□□□□ 0.1
PLOD3-201ENST00000223127 USP42Q9H9J4 1324 aaKnown RBP15.68■□□□□ 0.1
PLOD3-201ENST00000223127 SLIT2O94813 1529 aa15.68■□□□□ 0.1
PLOD3-201ENST00000223127 BRD1O95696 1058 aa15.67■□□□□ 0.1
PLOD3-201ENST00000223127 KIAA2012Q0VF49 1180 aa15.67■□□□□ 0.1
PLOD3-201ENST00000223127 NRAPQ86VF7 1730 aa15.67■□□□□ 0.1
PLOD3-201ENST00000223127 PALD1Q9ULE6 856 aa15.67■□□□□ 0.1
PLOD3-201ENST00000223127 BARGINQ6ZT62 677 aa15.67■□□□□ 0.1
PLOD3-201ENST00000223127 PTMAP06454 111 aaKnown RBP15.66■□□□□ 0.1
PLOD3-201ENST00000223127 TNNI3KQ59H18 835 aa15.66■□□□□ 0.1
PLOD3-201ENST00000223127 GIGYF2Q6Y7W6 1299 aaKnown RBP15.66■□□□□ 0.1
PLOD3-201ENST00000223127 DIAPH3Q9NSV4 1193 aa15.66■□□□□ 0.1
PLOD3-201ENST00000223127 NDUFB9Q9Y6M9 179 aa15.66■□□□□ 0.1
PLOD3-201ENST00000223127 FPGT-TNNI3KV9GXZ4 949 aa15.66■□□□□ 0.1
PLOD3-201ENST00000223127 DOT1LQ8TEK3 1739 aa15.66■□□□□ 0.1
PLOD3-201ENST00000223127 DZIP3Q86Y13 1208 aaKnown RBP15.66■□□□□ 0.1
PLOD3-201ENST00000223127 DBNLQ9UJU6 430 aaKnown RBP15.66■□□□□ 0.1
PLOD3-201ENST00000223127 NUP188Q5SRE5 1749 aa15.66■□□□□ 0.1
PLOD3-201ENST00000223127 LOC102724428A0A0B4J2F2 783 aa15.65■□□□□ 0.1
PLOD3-201ENST00000223127 SIK1P57059 783 aa15.65■□□□□ 0.1
PLOD3-201ENST00000223127 LRRC24Q50LG9 513 aa15.65■□□□□ 0.1
PLOD3-201ENST00000223127 MYRIPQ8NFW9 859 aa15.65■□□□□ 0.1
PLOD3-201ENST00000223127 EDC3Q96F86 508 aaKnown RBP15.65■□□□□ 0.1
PLOD3-201ENST00000223127 PRDM10Q9NQV6 1147 aa15.65■□□□□ 0.1
PLOD3-201ENST00000223127 TCHHQ07283 1943 aa15.65■□□□□ 0.1
PLOD3-201ENST00000223127 JCADQ9P266 1359 aa15.65■□□□□ 0.1
PLOD3-201ENST00000223127 KCNQ4P56696 695 aa15.65■□□□□ 0.1
PLOD3-201ENST00000223127 FAM182BQ5T319 152 aa15.65■□□□□ 0.1
PLOD3-201ENST00000223127 NEUROD6Q96NK8 337 aa15.65■□□□□ 0.1
PLOD3-201ENST00000223127 COL15A1P39059 1388 aa15.65■□□□□ 0.1
PLOD3-201ENST00000223127 FAM177BA6PVY3 158 aa15.64■□□□□ 0.09
PLOD3-201ENST00000223127 NEK4P51957 841 aa15.64■□□□□ 0.09
PLOD3-201ENST00000223127 CUL4AQ13619 759 aa15.64■□□□□ 0.09
PLOD3-201ENST00000223127 DBNDD2Q9BQY9 259 aa15.64■□□□□ 0.09
PLOD3-201ENST00000223127 PUS3Q9BZE2 481 aaKnown RBP15.64■□□□□ 0.09
PLOD3-201ENST00000223127 SGSM2O43147 1006 aa15.64■□□□□ 0.09
PLOD3-201ENST00000223127 MCCP23508 829 aa15.64■□□□□ 0.09
PLOD3-201ENST00000223127 CRKLP46109 303 aaKnown RBP15.64■□□□□ 0.09
PLOD3-201ENST00000223127 ITPK1Q13572 414 aa15.64■□□□□ 0.09
PLOD3-201ENST00000223127 CCDC57Q2TAC2 916 aa15.64■□□□□ 0.09
PLOD3-201ENST00000223127 NLRP10Q86W26 655 aa15.64■□□□□ 0.09
PLOD3-201ENST00000223127 EVI5LQ96CN4 794 aa15.64■□□□□ 0.09
PLOD3-201ENST00000223127 CCDC94Q9BW85 323 aaPredicted RBP15.64■□□□□ 0.09
PLOD3-201ENST00000223127 USP21Q9UK80 565 aa15.64■□□□□ 0.09
PLOD3-201ENST00000223127 WNK3Q9BYP7 1800 aa15.63■□□□□ 0.09
PLOD3-201ENST00000223127 LRP6O75581 1613 aa15.63■□□□□ 0.09
PLOD3-201ENST00000223127 ATG9AQ7Z3C6 839 aa15.63■□□□□ 0.09
PLOD3-201ENST00000223127 BCL9LQ86UU0 1499 aa15.63■□□□□ 0.09
PLOD3-201ENST00000223127 IL6STP40189 918 aaPredicted RBP15.63■□□□□ 0.09
PLOD3-201ENST00000223127 TIMM10P62072 90 aa15.63■□□□□ 0.09
PLOD3-201ENST00000223127 ZBTB38Q8NAP3 1195 aaPredicted RBP15.63■□□□□ 0.09
PLOD3-201ENST00000223127 FSD1Q9BTV5 496 aa15.63■□□□□ 0.09
PLOD3-201ENST00000223127 TRMT112Q9UI30 125 aaKnown RBP15.63■□□□□ 0.09
PLOD3-201ENST00000223127 PCCAP05165 728 aaPredicted RBP15.62■□□□□ 0.09
PLOD3-201ENST00000223127 TRIM28Q13263 835 aaKnown RBP15.62■□□□□ 0.09
PLOD3-201ENST00000223127 VPS72Q15906 364 aa15.62■□□□□ 0.09
PLOD3-201ENST00000223127 INTS5Q6P9B9 1019 aaKnown RBP15.62■□□□□ 0.09
PLOD3-201ENST00000223127 NOL8Q76FK4 1167 aaKnown RBP15.62■□□□□ 0.09
PLOD3-201ENST00000223127 PTF1AQ7RTS3 328 aa15.62■□□□□ 0.09
PLOD3-201ENST00000223127 ZNF710Q8N1W2 664 aa15.62■□□□□ 0.09
PLOD3-201ENST00000223127 DNAJC2Q99543 621 aaKnown RBP15.62■□□□□ 0.09
PLOD3-201ENST00000223127 CCDC87Q9NVE4 849 aa15.62■□□□□ 0.09
PLOD3-201ENST00000223127 PALLDQ8WX93 1383 aa15.62■□□□□ 0.09
PLOD3-201ENST00000223127 SYAP1Q96A49 352 aaPredicted RBP15.62■□□□□ 0.09
PLOD3-201ENST00000223127 FAM227BQ96M60 508 aa15.62■□□□□ 0.09
PLOD3-201ENST00000223127 UPF3BQ9BZI7 483 aaKnown RBP15.62■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms