RNA–Protein interactions for RNA: ENST00000223084.7

LSM5-201, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM5, Length 1,295 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-201ENST00000223084 PDE8AO60658 829 aa16.12■□□□□ 0.17
LSM5-201ENST00000223084 GRAPQ13588 217 aa16.12■□□□□ 0.17
LSM5-201ENST00000223084 GRAPLQ8TC17 118 aaPredicted RBP16.12■□□□□ 0.17
LSM5-201ENST00000223084 ZNF526Q8TF50 670 aaPredicted RBP16.12■□□□□ 0.17
LSM5-201ENST00000223084 TAOK3Q9H2K8 898 aa16.12■□□□□ 0.17
LSM5-201ENST00000223084 CDHR2Q9BYE9 1310 aa16.12■□□□□ 0.17
LSM5-201ENST00000223084 LMNB1P20700 586 aa16.11■□□□□ 0.17
LSM5-201ENST00000223084 RARSP54136 660 aaKnown RBP16.11■□□□□ 0.17
LSM5-201ENST00000223084 CASP7P55210 303 aa16.11■□□□□ 0.17
LSM5-201ENST00000223084 COL4A1P02462 1669 aa16.11■□□□□ 0.17
LSM5-201ENST00000223084 CEP350Q5VT06 3117 aa16.1■□□□□ 0.17
LSM5-201ENST00000223084 HSP90B1P14625 803 aaKnown RBP16.1■□□□□ 0.17
LSM5-201ENST00000223084 RTKN2Q8IZC4 609 aa16.1■□□□□ 0.17
LSM5-201ENST00000223084 CELF1Q92879 486 aaKnown RBP16.1■□□□□ 0.17
LSM5-201ENST00000223084 SEC31BQ9NQW1 1179 aa16.1■□□□□ 0.17
LSM5-201ENST00000223084 NOB1Q9ULX3 412 aaKnown RBP16.1■□□□□ 0.17
LSM5-201ENST00000223084 PTPRCP08575 1304 aa16.1■□□□□ 0.17
LSM5-201ENST00000223084 LTBP3Q9NS15 1303 aa16.1■□□□□ 0.17
LSM5-201ENST00000223084 BBOX1O75936 387 aa16.09■□□□□ 0.17
LSM5-201ENST00000223084 FKBP4Q02790 459 aaKnown RBP eCLIP16.09■□□□□ 0.17
LSM5-201ENST00000223084 SRCIN1Q9C0H9 1055 aa16.09■□□□□ 0.17
LSM5-201ENST00000223084 ZNF277Q9NRM2 450 aaPredicted RBP16.09■□□□□ 0.17
LSM5-201ENST00000223084 ATP6V0A2Q9Y487 856 aa16.09■□□□□ 0.17
LSM5-201ENST00000223084 SNED1Q8TER0 1413 aa16.09■□□□□ 0.17
LSM5-201ENST00000223084 CTSWP56202 376 aa16.08■□□□□ 0.16
LSM5-201ENST00000223084 CCDC152Q4G0S7 254 aa16.08■□□□□ 0.16
LSM5-201ENST00000223084 TTLL11Q8NHH1 800 aa16.08■□□□□ 0.16
LSM5-201ENST00000223084 MYH3P11055 1940 aa16.07■□□□□ 0.16
LSM5-201ENST00000223084 BCAR3O75815 825 aa16.07■□□□□ 0.16
LSM5-201ENST00000223084 ALDH1L1O75891 902 aa16.07■□□□□ 0.16
LSM5-201ENST00000223084 CC2D2BQ6DHV5 1058 aa16.07■□□□□ 0.16
LSM5-201ENST00000223084 SP8Q8IXZ3 490 aa16.07■□□□□ 0.16
LSM5-201ENST00000223084 GREM2Q9H772 168 aa16.07■□□□□ 0.16
LSM5-201ENST00000223084 DICER1Q9UPY3 1922 aaKnown RBP16.06■□□□□ 0.16
LSM5-201ENST00000223084 GRM8O00222 908 aa16.06■□□□□ 0.16
LSM5-201ENST00000223084 BRPF1P55201 1214 aaPredicted RBP16.06■□□□□ 0.16
LSM5-201ENST00000223084 RPS8P62241 208 aaKnown RBP16.06■□□□□ 0.16
LSM5-201ENST00000223084 PLA2G12BQ9BX93 195 aa16.06■□□□□ 0.16
LSM5-201ENST00000223084 TMX4Q9H1E5 349 aaPredicted RBP16.06■□□□□ 0.16
LSM5-201ENST00000223084 C9orf78Q9NZ63 289 aaPredicted RBP16.06■□□□□ 0.16
LSM5-201ENST00000223084 PSMD1Q99460 953 aa16.05■□□□□ 0.16
LSM5-201ENST00000223084 GPBP1L1Q9HC44 474 aaPredicted RBP16.05■□□□□ 0.16
LSM5-201ENST00000223084 IARSP41252 1262 aaKnown RBP16.04■□□□□ 0.16
LSM5-201ENST00000223084 FOXO4P98177 505 aa16.04■□□□□ 0.16
LSM5-201ENST00000223084 EPHA10Q5JZY3 1008 aa16.04■□□□□ 0.16
LSM5-201ENST00000223084 MPNDQ8N594 471 aa16.04■□□□□ 0.16
LSM5-201ENST00000223084 TIAM2Q8IVF5 1701 aa16.04■□□□□ 0.16
LSM5-201ENST00000223084 CSF1RP07333 972 aa16.03■□□□□ 0.16
LSM5-201ENST00000223084 NBPF7P0C2Y1 421 aaPredicted RBP16.03■□□□□ 0.16
LSM5-201ENST00000223084 GPSM2P81274 684 aa16.03■□□□□ 0.16
LSM5-201ENST00000223084 FAM161AQ3B820 660 aa16.03■□□□□ 0.16
LSM5-201ENST00000223084 GRIPAP1Q4V328 841 aa16.03■□□□□ 0.16
LSM5-201ENST00000223084 DPP8Q6V1X1 898 aaPredicted RBP16.03■□□□□ 0.16
LSM5-201ENST00000223084 TMC4Q7Z404 712 aa16.03■□□□□ 0.16
LSM5-201ENST00000223084 ANKRD18AQ8IVF6 992 aa16.03■□□□□ 0.16
LSM5-201ENST00000223084 SUCLG2Q96I99 432 aa16.03■□□□□ 0.16
LSM5-201ENST00000223084 API5Q9BZZ5 524 aaKnown RBP16.03■□□□□ 0.16
LSM5-201ENST00000223084 TNNQ9UQP3 1299 aa16.03■□□□□ 0.16
LSM5-201ENST00000223084 FRAT1Q92837 279 aaPredicted RBP16.02■□□□□ 0.16
LSM5-201ENST00000223084 NMRK2Q9NPI5 230 aa16.02■□□□□ 0.16
LSM5-201ENST00000223084 NSFL1CQ9UNZ2 370 aaKnown RBP16.02■□□□□ 0.16
LSM5-201ENST00000223084 LRRC37AA6NMS7 1700 aa16.02■□□□□ 0.15
LSM5-201ENST00000223084 COL4A5P29400 1685 aa16.02■□□□□ 0.15
LSM5-201ENST00000223084 SPEF2Q9C093 1822 aa16.01■□□□□ 0.15
LSM5-201ENST00000223084 KIF16BQ96L93 1317 aa16.01■□□□□ 0.15
LSM5-201ENST00000223084 ZC3H4Q9UPT8 1303 aaKnown RBP16.01■□□□□ 0.15
LSM5-201ENST00000223084 ITGA6P23229 1130 aa16.01■□□□□ 0.15
LSM5-201ENST00000223084 AOC3Q16853 763 aa16.01■□□□□ 0.15
LSM5-201ENST00000223084 LMBR1LQ6UX01 489 aa16.01■□□□□ 0.15
LSM5-201ENST00000223084 KAZALD1Q96I82 304 aa16.01■□□□□ 0.15
LSM5-201ENST00000223084 CDC5LQ99459 802 aaKnown RBP16.01■□□□□ 0.15
LSM5-201ENST00000223084 RTFDC1Q9BY42 306 aaPredicted RBP16.01■□□□□ 0.15
LSM5-201ENST00000223084 USP44Q9H0E7 712 aa16.01■□□□□ 0.15
LSM5-201ENST00000223084 CHMP3Q9Y3E7 222 aa16.01■□□□□ 0.15
LSM5-201ENST00000223084 RTL9Q8NET4 1388 aa16■□□□□ 0.15
LSM5-201ENST00000223084 UTYO14607 1347 aa16■□□□□ 0.15
LSM5-201ENST00000223084 GLTPD2A6NH11 291 aa16■□□□□ 0.15
LSM5-201ENST00000223084 PPIP5K2O43314 1243 aa16■□□□□ 0.15
LSM5-201ENST00000223084 CCT4P50991 539 aaKnown RBP16■□□□□ 0.15
LSM5-201ENST00000223084 LARGE2Q8N3Y3 721 aa16■□□□□ 0.15
LSM5-201ENST00000223084 ARHGAP45Q92619 1136 aa16■□□□□ 0.15
LSM5-201ENST00000223084 GPR101Q96P66 508 aaPredicted RBP16■□□□□ 0.15
LSM5-201ENST00000223084 POLLQ9UGP5 575 aa16■□□□□ 0.15
LSM5-201ENST00000223084 ZNF541Q9H0D2 1346 aa15.99■□□□□ 0.15
LSM5-201ENST00000223084 TRIM27P14373 513 aa15.99■□□□□ 0.15
LSM5-201ENST00000223084 SUPT20HQ8NEM7 779 aa15.99■□□□□ 0.15
LSM5-201ENST00000223084 CLUAP1Q96AJ1 413 aa15.99■□□□□ 0.15
LSM5-201ENST00000223084 RRAGCQ9HB90 399 aa15.99■□□□□ 0.15
LSM5-201ENST00000223084 DUOX1Q9NRD9 1551 aa15.99■□□□□ 0.15
LSM5-201ENST00000223084 KDM2BQ8NHM5 1336 aa15.98■□□□□ 0.15
LSM5-201ENST00000223084 ANKRD18BA2A2Z9 1011 aa15.98■□□□□ 0.15
LSM5-201ENST00000223084 C6orf229H3BNL8 230 aa15.98■□□□□ 0.15
LSM5-201ENST00000223084 KIF3CO14782 793 aa15.98■□□□□ 0.15
LSM5-201ENST00000223084 IPO8O15397 1037 aaKnown RBP15.98■□□□□ 0.15
LSM5-201ENST00000223084 DDNO94850 711 aaPredicted RBP15.98■□□□□ 0.15
LSM5-201ENST00000223084 IGHMBP2P38935 993 aaKnown RBP15.98■□□□□ 0.15
LSM5-201ENST00000223084 JDP2Q8WYK2 163 aa15.98■□□□□ 0.15
LSM5-201ENST00000223084 BICC1Q9H694 974 aaKnown RBP15.98■□□□□ 0.15
LSM5-201ENST00000223084 BSDC1Q9NW68 430 aaPredicted RBP15.98■□□□□ 0.15
LSM5-201ENST00000223084 ANKIB1Q9P2G1 1089 aa15.98■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms