RNA–Protein interactions for RNA: ENST00000221973.7

LIM2-201, Transcript of lens intrinsic membrane protein 2, humanhuman

TSL 1 (best) BASIC

Gene LIM2, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIM2-201ENST00000221973 ABCC4O15439 1325 aa20.75■□□□□ 0.91
LIM2-201ENST00000221973 RLBP1P12271 317 aa20.74■□□□□ 0.91
LIM2-201ENST00000221973 FKBP4Q02790 459 aaKnown RBP eCLIP20.74■□□□□ 0.91
LIM2-201ENST00000221973 CWF19L2Q2TBE0 894 aaKnown RBP20.74■□□□□ 0.91
LIM2-201ENST00000221973 BEND3Q5T5X7 828 aa20.74■□□□□ 0.91
LIM2-201ENST00000221973 ZNF34Q8IZ26 560 aa20.74■□□□□ 0.91
LIM2-201ENST00000221973 PANK1Q8TE04 598 aa20.74■□□□□ 0.91
LIM2-201ENST00000221973 ISCA1Q9BUE6 129 aa20.74■□□□□ 0.91
LIM2-201ENST00000221973 RNF123Q5XPI4 1314 aa20.74■□□□□ 0.91
LIM2-201ENST00000221973 IGKV5-2P06315 115 aa20.73■□□□□ 0.91
LIM2-201ENST00000221973 POTEIP0CG38 1075 aa20.73■□□□□ 0.91
LIM2-201ENST00000221973 POTEJP0CG39 1038 aa20.73■□□□□ 0.91
LIM2-201ENST00000221973 MS4A1P11836 297 aa20.73■□□□□ 0.91
LIM2-201ENST00000221973 C20orf194Q5TEA3 1177 aa20.73■□□□□ 0.91
LIM2-201ENST00000221973 SUSD4Q5VX71 490 aa20.73■□□□□ 0.91
LIM2-201ENST00000221973 LINS1Q8NG48 757 aa20.73■□□□□ 0.91
LIM2-201ENST00000221973 SRCIN1Q9C0H9 1055 aa20.73■□□□□ 0.91
LIM2-201ENST00000221973 ZNF277Q9NRM2 450 aaPredicted RBP20.73■□□□□ 0.91
LIM2-201ENST00000221973 IBTKQ9P2D0 1353 aaPredicted RBP20.72■□□□□ 0.91
LIM2-201ENST00000221973 RIC1Q4ADV7 1423 aa20.72■□□□□ 0.91
LIM2-201ENST00000221973 NEURL1BA8MQ27 555 aa20.72■□□□□ 0.91
LIM2-201ENST00000221973 CCT4P50991 539 aaKnown RBP20.72■□□□□ 0.91
LIM2-201ENST00000221973 TMEM57Q8N5G2 664 aa20.72■□□□□ 0.91
LIM2-201ENST00000221973 NYXQ9GZU5 481 aa20.72■□□□□ 0.91
LIM2-201ENST00000221973 ALDH1B1P30837 517 aa20.71■□□□□ 0.91
LIM2-201ENST00000221973 INTS3Q68E01 1043 aaKnown RBP20.71■□□□□ 0.91
LIM2-201ENST00000221973 SLC51AQ86UW1 340 aa20.71■□□□□ 0.91
LIM2-201ENST00000221973 NLRP10Q86W26 655 aa20.71■□□□□ 0.91
LIM2-201ENST00000221973 L3MBTL3Q96JM7 780 aaPredicted RBP20.71■□□□□ 0.91
LIM2-201ENST00000221973 ZNF541Q9H0D2 1346 aa20.71■□□□□ 0.91
LIM2-201ENST00000221973 NTSR2O95665 410 aa20.7■□□□□ 0.9
LIM2-201ENST00000221973 GTF2E1P29083 439 aaPredicted RBP20.7■□□□□ 0.9
LIM2-201ENST00000221973 HOXA10P31260 410 aaPredicted RBP20.7■□□□□ 0.9
LIM2-201ENST00000221973 TRIM28Q13263 835 aaKnown RBP20.7■□□□□ 0.9
LIM2-201ENST00000221973 PDE3AQ14432 1141 aa20.7■□□□□ 0.9
LIM2-201ENST00000221973 C3orf67Q6ZVT6 689 aa20.7■□□□□ 0.9
LIM2-201ENST00000221973 RTKN2Q8IZC4 609 aa20.7■□□□□ 0.9
LIM2-201ENST00000221973 CCDC191Q8NCU4 936 aa20.7■□□□□ 0.9
LIM2-201ENST00000221973 CWC25Q9NXE8 425 aaPredicted RBP20.7■□□□□ 0.9
LIM2-201ENST00000221973 ALDH1L1O75891 902 aa20.69■□□□□ 0.9
LIM2-201ENST00000221973 PARP10Q53GL7 1025 aa20.69■□□□□ 0.9
LIM2-201ENST00000221973 ITPRIPQ8IWB1 547 aa20.69■□□□□ 0.9
LIM2-201ENST00000221973 COL4A5P29400 1685 aa20.69■□□□□ 0.9
LIM2-201ENST00000221973 GCKRQ14397 625 aa20.68■□□□□ 0.9
LIM2-201ENST00000221973 SYNE4Q8N205 404 aa20.68■□□□□ 0.9
LIM2-201ENST00000221973 COG6Q9Y2V7 657 aa20.68■□□□□ 0.9
LIM2-201ENST00000221973 SCN4AP35499 1836 aa20.67■□□□□ 0.9
LIM2-201ENST00000221973 CHADLQ6NUI6 762 aa20.67■□□□□ 0.9
LIM2-201ENST00000221973 PPP1R42Q7Z4L9 355 aa20.67■□□□□ 0.9
LIM2-201ENST00000221973 JARID2Q92833 1246 aaPredicted RBP20.67■□□□□ 0.9
LIM2-201ENST00000221973 PSMD1Q99460 953 aa20.67■□□□□ 0.9
LIM2-201ENST00000221973 UTP14AQ9BVJ6 771 aaKnown RBP20.67■□□□□ 0.9
LIM2-201ENST00000221973 TAF1DQ9H5J8 278 aaPredicted RBP20.67■□□□□ 0.9
LIM2-201ENST00000221973 TRMT112Q9UI30 125 aaKnown RBP20.67■□□□□ 0.9
LIM2-201ENST00000221973 FZD9O00144 591 aa20.66■□□□□ 0.9
LIM2-201ENST00000221973 IARSP41252 1262 aaKnown RBP20.66■□□□□ 0.9
LIM2-201ENST00000221973 RTL5Q5HYW3 569 aaPredicted RBP20.66■□□□□ 0.9
LIM2-201ENST00000221973 IRX6P78412 446 aaPredicted RBP20.65■□□□□ 0.9
LIM2-201ENST00000221973 MVPQ14764 893 aaKnown RBP20.65■□□□□ 0.9
LIM2-201ENST00000221973 C9orf78Q9NZ63 289 aaPredicted RBP20.65■□□□□ 0.9
LIM2-201ENST00000221973 FAM89AQ96GI7 184 aa20.64■□□□□ 0.89
LIM2-201ENST00000221973 CRAMP1Q96RY5 1269 aa20.64■□□□□ 0.89
LIM2-201ENST00000221973 ADAMTSL1Q8N6G6 1762 aa20.64■□□□□ 0.89
LIM2-201ENST00000221973 IQCA1LA6NCM1 817 aa20.63■□□□□ 0.89
LIM2-201ENST00000221973 GRM8O00222 908 aa20.63■□□□□ 0.89
LIM2-201ENST00000221973 SLC10A5Q5PT55 438 aa20.63■□□□□ 0.89
LIM2-201ENST00000221973 ZBTB38Q8NAP3 1195 aaPredicted RBP20.63■□□□□ 0.89
LIM2-201ENST00000221973 CRBNQ96SW2 442 aa20.63■□□□□ 0.89
LIM2-201ENST00000221973 USP44Q9H0E7 712 aa20.63■□□□□ 0.89
LIM2-201ENST00000221973 ANKRD36CQ5JPF3 1778 aa20.62■□□□□ 0.89
LIM2-201ENST00000221973 SH3TC1Q8TE82 1336 aa20.62■□□□□ 0.89
LIM2-201ENST00000221973 PASKQ96RG2 1323 aa20.62■□□□□ 0.89
LIM2-201ENST00000221973 H7C1W4 665 aa20.62■□□□□ 0.89
LIM2-201ENST00000221973 PCCAP05165 728 aaPredicted RBP20.62■□□□□ 0.89
LIM2-201ENST00000221973 NBPF7P0C2Y1 421 aaPredicted RBP20.62■□□□□ 0.89
LIM2-201ENST00000221973 CC2D2BQ6DHV5 1058 aa20.62■□□□□ 0.89
LIM2-201ENST00000221973 UBE3BQ7Z3V4 1068 aa20.62■□□□□ 0.89
LIM2-201ENST00000221973 LDHDQ86WU2 507 aa20.62■□□□□ 0.89
LIM2-201ENST00000221973 RPGRQ92834 1020 aaKnown RBP20.62■□□□□ 0.89
LIM2-201ENST00000221973 MEIS3Q99687 375 aa20.62■□□□□ 0.89
LIM2-201ENST00000221973 COL13A1Q5TAT6 717 aaPredicted RBP20.61■□□□□ 0.89
LIM2-201ENST00000221973 RBM17Q96I25 401 aaKnown RBP20.61■□□□□ 0.89
LIM2-201ENST00000221973 CREBZFQ9NS37 354 aa20.61■□□□□ 0.89
LIM2-201ENST00000221973 DDX19BQ9UMR2 479 aa20.61■□□□□ 0.89
LIM2-201ENST00000221973 ZBTB7BO15156 539 aaPredicted RBP20.6■□□□□ 0.89
LIM2-201ENST00000221973 ITGBL1O95965 494 aaPredicted RBP20.6■□□□□ 0.89
LIM2-201ENST00000221973 CASP7P55210 303 aa20.6■□□□□ 0.89
LIM2-201ENST00000221973 UTYO14607 1347 aa20.59■□□□□ 0.89
LIM2-201ENST00000221973 IRS4O14654 1257 aaPredicted RBP20.59■□□□□ 0.89
LIM2-201ENST00000221973 PPEF1O14829 653 aaPredicted RBP20.59■□□□□ 0.89
LIM2-201ENST00000221973 UBTFL1P0CB47 393 aaPredicted RBP20.59■□□□□ 0.89
LIM2-201ENST00000221973 HCLS1P14317 486 aaPredicted RBP20.59■□□□□ 0.89
LIM2-201ENST00000221973 GPC2Q8N158 579 aa20.59■□□□□ 0.89
LIM2-201ENST00000221973 HACL1Q9UJ83 578 aa20.59■□□□□ 0.89
LIM2-201ENST00000221973 LAMB2P55268 1798 aa20.59■□□□□ 0.89
LIM2-201ENST00000221973 LTBP1Q14766 1721 aa20.58■□□□□ 0.89
LIM2-201ENST00000221973 GNAI3P08754 354 aa20.58■□□□□ 0.89
LIM2-201ENST00000221973 EPHX2P34913 555 aa20.58■□□□□ 0.89
LIM2-201ENST00000221973 NLRP3Q96P20 1036 aa20.58■□□□□ 0.89
LIM2-201ENST00000221973 CDHR2Q9BYE9 1310 aa20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms