RNA–Protein interactions for RNA: ENST00000221222.15

HOMER3-201, Transcript of homer scaffold protein 3, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene HOMER3, Length 1,384 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-201ENST00000221222 NPR1P16066 1061 aa29.76■■■□□ 2.35
HOMER3-201ENST00000221222 RRP1P56182 461 aaKnown RBP29.76■■■□□ 2.35
HOMER3-201ENST00000221222 PDE3AQ14432 1141 aa29.76■■■□□ 2.35
HOMER3-201ENST00000221222 STYK1Q6J9G0 422 aa29.76■■■□□ 2.35
HOMER3-201ENST00000221222 PANK1Q8TE04 598 aa29.76■■■□□ 2.35
HOMER3-201ENST00000221222 HOXA10P31260 410 aaPredicted RBP29.74■■■□□ 2.35
HOMER3-201ENST00000221222 ARHGAP27Q6ZUM4 889 aa29.74■■■□□ 2.35
HOMER3-201ENST00000221222 CTSWP56202 376 aa29.73■■■□□ 2.35
HOMER3-201ENST00000221222 PIM2Q9P1W9 311 aa29.73■■■□□ 2.35
HOMER3-201ENST00000221222 ITPRIPQ8IWB1 547 aa29.72■■■□□ 2.35
HOMER3-201ENST00000221222 RPGRQ92834 1020 aaKnown RBP29.72■■■□□ 2.35
HOMER3-201ENST00000221222 CACNA1SQ13698 1873 aa29.72■■■□□ 2.35
HOMER3-201ENST00000221222 ZNF622Q969S3 477 aaKnown RBP eCLIP29.71■■■□□ 2.35
HOMER3-201ENST00000221222 RBM17Q96I25 401 aaKnown RBP29.71■■■□□ 2.35
HOMER3-201ENST00000221222 KAZALD1Q96I82 304 aa29.71■■■□□ 2.35
HOMER3-201ENST00000221222 SUCLG2Q96I99 432 aa29.71■■■□□ 2.35
HOMER3-201ENST00000221222 MEIS3Q99687 375 aa29.71■■■□□ 2.35
HOMER3-201ENST00000221222 UBTFL1P0CB47 393 aaPredicted RBP29.7■■■□□ 2.35
HOMER3-201ENST00000221222 FOXO4P98177 505 aa29.7■■■□□ 2.35
HOMER3-201ENST00000221222 TTLL11Q8NHH1 800 aa29.7■■■□□ 2.35
HOMER3-201ENST00000221222 CRAMP1Q96RY5 1269 aa29.7■■■□□ 2.35
HOMER3-201ENST00000221222 ARFGEF1Q9Y6D6 1849 aa29.7■■■□□ 2.34
HOMER3-201ENST00000221222 CSF1RP07333 972 aa29.69■■■□□ 2.34
HOMER3-201ENST00000221222 GNAI3P08754 354 aa29.69■■■□□ 2.34
HOMER3-201ENST00000221222 MVPQ14764 893 aaKnown RBP29.69■■■□□ 2.34
HOMER3-201ENST00000221222 CCDC152Q4G0S7 254 aa29.69■■■□□ 2.34
HOMER3-201ENST00000221222 C20orf194Q5TEA3 1177 aa29.69■■■□□ 2.34
HOMER3-201ENST00000221222 CNKSR1Q969H4 720 aa29.69■■■□□ 2.34
HOMER3-201ENST00000221222 RTL9Q8NET4 1388 aa29.69■■■□□ 2.34
HOMER3-201ENST00000221222 ALDH1B1P30837 517 aa29.68■■■□□ 2.34
HOMER3-201ENST00000221222 EPHA10Q5JZY3 1008 aa29.68■■■□□ 2.34
HOMER3-201ENST00000221222 TTLL6Q8N841 843 aa29.68■■■□□ 2.34
HOMER3-201ENST00000221222 HDAC5Q9UQL6 1122 aa29.68■■■□□ 2.34
HOMER3-201ENST00000221222 SLX4Q8IY92 1834 aa29.68■■■□□ 2.34
HOMER3-201ENST00000221222 TAF1P21675 1872 aa29.67■■■□□ 2.34
HOMER3-201ENST00000221222 DALRD3Q5D0E6 543 aaKnown RBP29.66■■■□□ 2.34
HOMER3-201ENST00000221222 DDX46Q7L014 1031 aaKnown RBP29.66■■■□□ 2.34
HOMER3-201ENST00000221222 COG6Q9Y2V7 657 aa29.66■■■□□ 2.34
HOMER3-201ENST00000221222 ZBTB7BO15156 539 aaPredicted RBP29.65■■■□□ 2.34
HOMER3-201ENST00000221222 RABL6Q3YEC7 729 aaPredicted RBP29.65■■■□□ 2.34
HOMER3-201ENST00000221222 PRPF40BQ6NWY9 871 aaKnown RBP29.64■■■□□ 2.34
HOMER3-201ENST00000221222 BICC1Q9H694 974 aaKnown RBP29.64■■■□□ 2.34
HOMER3-201ENST00000221222 DDX19BQ9UMR2 479 aa29.64■■■□□ 2.34
HOMER3-201ENST00000221222 LMBR1LQ6UX01 489 aa29.64■■■□□ 2.33
HOMER3-201ENST00000221222 ANKRD44Q8N8A2 993 aa29.64■■■□□ 2.33
HOMER3-201ENST00000221222 GREM2Q9H772 168 aa29.64■■■□□ 2.33
HOMER3-201ENST00000221222 SUPT16HQ9Y5B9 1047 aaKnown RBP29.64■■■□□ 2.33
HOMER3-201ENST00000221222 COL4A1P02462 1669 aa29.63■■■□□ 2.33
HOMER3-201ENST00000221222 GRAPQ13588 217 aa29.63■■■□□ 2.33
HOMER3-201ENST00000221222 GRAPLQ8TC17 118 aaPredicted RBP29.63■■■□□ 2.33
HOMER3-201ENST00000221222 CCDC85AQ96PX6 553 aaPredicted RBP29.63■■■□□ 2.33
HOMER3-201ENST00000221222 SEC31BQ9NQW1 1179 aa29.62■■■□□ 2.33
HOMER3-201ENST00000221222 LRRFIP2Q9Y608 721 aaKnown RBP29.62■■■□□ 2.33
HOMER3-201ENST00000221222 FAM161AQ3B820 660 aa29.61■■■□□ 2.33
HOMER3-201ENST00000221222 BBOX1O75936 387 aa29.6■■■□□ 2.33
HOMER3-201ENST00000221222 GNAI2P04899 355 aa29.6■■■□□ 2.33
HOMER3-201ENST00000221222 ITGA6P23229 1130 aa29.59■■■□□ 2.33
HOMER3-201ENST00000221222 C9orf131Q5VYM1 1079 aa29.59■■■□□ 2.33
HOMER3-201ENST00000221222 C7orf43Q8WVR3 580 aa29.59■■■□□ 2.33
HOMER3-201ENST00000221222 CELF1Q92879 486 aaKnown RBP29.59■■■□□ 2.33
HOMER3-201ENST00000221222 CHMP4BQ9H444 224 aaKnown RBP29.59■■■□□ 2.33
HOMER3-201ENST00000221222 CDC5LQ99459 802 aaKnown RBP29.58■■■□□ 2.33
HOMER3-201ENST00000221222 LRRC37AA6NMS7 1700 aa29.57■■■□□ 2.32
HOMER3-201ENST00000221222 KIF3CO14782 793 aa29.57■■■□□ 2.32
HOMER3-201ENST00000221222 PPEF1O14829 653 aaPredicted RBP29.57■■■□□ 2.32
HOMER3-201ENST00000221222 RPS8P62241 208 aaKnown RBP29.57■■■□□ 2.32
HOMER3-201ENST00000221222 TMC4Q7Z404 712 aa29.57■■■□□ 2.32
HOMER3-201ENST00000221222 CHMP3Q9Y3E7 222 aa29.57■■■□□ 2.32
HOMER3-201ENST00000221222 SPEF2Q9C093 1822 aa29.57■■■□□ 2.32
HOMER3-201ENST00000221222 ANKRD18BA2A2Z9 1011 aa29.56■■■□□ 2.32
HOMER3-201ENST00000221222 IFIT5Q13325 482 aaKnown RBP29.56■■■□□ 2.32
HOMER3-201ENST00000221222 ZBTB40Q9NUA8 1239 aa29.56■■■□□ 2.32
HOMER3-201ENST00000221222 MTX1Q13505 466 aa29.55■■■□□ 2.32
HOMER3-201ENST00000221222 CCDC57Q2TAC2 916 aa29.55■■■□□ 2.32
HOMER3-201ENST00000221222 ANKRD18AQ8IVF6 992 aa29.54■■■□□ 2.32
HOMER3-201ENST00000221222 ATP6V0A2Q9Y487 856 aa29.54■■■□□ 2.32
HOMER3-201ENST00000221222 C21orf2O43822 256 aa29.53■■■□□ 2.32
HOMER3-201ENST00000221222 CENPBP07199 599 aaPredicted RBP29.53■■■□□ 2.32
HOMER3-201ENST00000221222 SOGA3Q5TF21 947 aa29.53■■■□□ 2.32
HOMER3-201ENST00000221222 RNF181Q9P0P0 153 aa29.53■■■□□ 2.32
HOMER3-201ENST00000221222 FER1L6Q2WGJ9 1857 aa29.53■■■□□ 2.32
HOMER3-201ENST00000221222 CC2D2BQ6DHV5 1058 aa29.52■■■□□ 2.32
HOMER3-201ENST00000221222 SP8Q8IXZ3 490 aa29.52■■■□□ 2.32
HOMER3-201ENST00000221222 SNED1Q8TER0 1413 aa29.52■■■□□ 2.32
HOMER3-201ENST00000221222 NMRK2Q9NPI5 230 aa29.52■■■□□ 2.32
HOMER3-201ENST00000221222 IGHMBP2P38935 993 aaKnown RBP29.51■■■□□ 2.31
HOMER3-201ENST00000221222 RASSF7Q02833 373 aa29.51■■■□□ 2.31
HOMER3-201ENST00000221222 C1orf115Q9H7X2 142 aa29.51■■■□□ 2.31
HOMER3-201ENST00000221222 BSDC1Q9NW68 430 aaPredicted RBP29.51■■■□□ 2.31
HOMER3-201ENST00000221222 ZNF219Q9P2Y4 722 aaPredicted RBP29.51■■■□□ 2.31
HOMER3-201ENST00000221222 SBF1O95248 1867 aa29.5■■■□□ 2.31
HOMER3-201ENST00000221222 CCDC93Q567U6 631 aa29.5■■■□□ 2.31
HOMER3-201ENST00000221222 CEP350Q5VT06 3117 aa29.49■■■□□ 2.31
HOMER3-201ENST00000221222 RFX5P48382 616 aaPredicted RBP29.49■■■□□ 2.31
HOMER3-201ENST00000221222 GRIPAP1Q4V328 841 aa29.49■■■□□ 2.31
HOMER3-201ENST00000221222 OLFM4Q6UX06 510 aa29.49■■■□□ 2.31
HOMER3-201ENST00000221222 CRBNQ96SW2 442 aa29.49■■■□□ 2.31
HOMER3-201ENST00000221222 HSPA6P17066 643 aa29.48■■■□□ 2.31
HOMER3-201ENST00000221222 SLC51AQ86UW1 340 aa29.48■■■□□ 2.31
HOMER3-201ENST00000221222 MPHOSPH8Q99549 860 aa29.48■■■□□ 2.31
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms