RNA–Protein interactions for RNA: ENST00000216605.12

MTHFD1-201, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MTHFD1, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-201ENST00000216605 THRAP3Q9Y2W1 955 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-201ENST00000216605 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.7□□□□□ -0.7
MTHFD1-201ENST00000216605 ABCA3Q99758 1704 aa10.7□□□□□ -0.7
MTHFD1-201ENST00000216605 VGLL3A8MV65 326 aa10.7□□□□□ -0.7
MTHFD1-201ENST00000216605 EVI5LQ96CN4 794 aa10.7□□□□□ -0.7
MTHFD1-201ENST00000216605 UPF3BQ9BZI7 483 aaKnown RBP10.7□□□□□ -0.7
MTHFD1-201ENST00000216605 COPRSQ9NQ92 184 aa10.7□□□□□ -0.7
MTHFD1-201ENST00000216605 ESPNB1AK53 854 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 HLFQ16534 295 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 MARCH10Q8NA82 808 aaPredicted RBP10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 PRDM16Q9HAZ2 1276 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 NDUFB9Q9Y6M9 179 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 CYP19A1P11511 503 aaPredicted RBP10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 IRX3P78415 501 aaPredicted RBP10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 TNNI3KQ59H18 835 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 MAP7D2Q96T17 732 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 PSMD1Q99460 953 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 CEP126Q9P2H0 1117 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 FPGT-TNNI3KV9GXZ4 949 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 MAP3K15Q6ZN16 1313 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 PTMSP20962 102 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 TIMM10P62072 90 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 IFIT5Q13325 482 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 HSP90AB3PQ58FF7 597 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 UTP14CQ5TAP6 766 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 DBNDD2Q9BQY9 259 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 KCNG1Q9UIX4 513 aa10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 COL14A1Q05707 1796 aaKnown RBP10.69□□□□□ -0.7
MTHFD1-201ENST00000216605 PHLPP1O60346 1717 aa10.68□□□□□ -0.7
MTHFD1-201ENST00000216605 FOXO4P98177 505 aa10.68□□□□□ -0.7
MTHFD1-201ENST00000216605 GIGYF2Q6Y7W6 1299 aaKnown RBP10.68□□□□□ -0.7
MTHFD1-201ENST00000216605 SYNE4Q8N205 404 aa10.68□□□□□ -0.7
MTHFD1-201ENST00000216605 EDC3Q96F86 508 aaKnown RBP10.68□□□□□ -0.7
MTHFD1-201ENST00000216605 SPATA31A5Q5VU36 1347 aa10.68□□□□□ -0.7
MTHFD1-201ENST00000216605 SPATA31A7Q8IWB4 1347 aa10.68□□□□□ -0.7
MTHFD1-201ENST00000216605 KCNQ2O43526 872 aa10.68□□□□□ -0.7
MTHFD1-201ENST00000216605 SKOR2Q2VWA4 1001 aaPredicted RBP10.68□□□□□ -0.7
MTHFD1-201ENST00000216605 RABL6Q3YEC7 729 aaPredicted RBP10.68□□□□□ -0.7
MTHFD1-201ENST00000216605 SLC4A9Q96Q91 983 aa10.68□□□□□ -0.7
MTHFD1-201ENST00000216605 PALD1Q9ULE6 856 aa10.68□□□□□ -0.7
MTHFD1-201ENST00000216605 BCL9O00512 1426 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 LOC102724428A0A0B4J2F2 783 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 SGSM2O43147 1006 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 KCNQ4P56696 695 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 SIK1P57059 783 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 LRRC24Q50LG9 513 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 FAM182BQ5T319 152 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 GBP4Q96PP9 640 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 IL15P40933 162 aaPredicted RBP10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 RFX5P48382 616 aaPredicted RBP10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 IL25Q9H293 177 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 CNNM1Q9NRU3 951 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 DBNLQ9UJU6 430 aaKnown RBP10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 USP21Q9UK80 565 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 KCPQ6ZWJ8 1503 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 AHDC1Q5TGY3 1603 aaPredicted RBP10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 HIP1O00291 1037 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 CASP7P55210 303 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 ANP32BQ92688 251 aaKnown RBP10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 ISCA1Q9BUE6 129 aa10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 PUS3Q9BZE2 481 aaKnown RBP10.67□□□□□ -0.7
MTHFD1-201ENST00000216605 EYA2O00167 538 aa10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 CRKLP46109 303 aaKnown RBP10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 PPP4R3BQ5MIZ7 849 aa10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 DDX46Q7L014 1031 aaKnown RBP10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 FAM177A1Q8N128 213 aaPredicted RBP10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 ZBTB38Q8NAP3 1195 aaPredicted RBP10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 FAM227BQ96M60 508 aa10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 CCDC87Q9NVE4 849 aa10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 CIZ1Q9ULV3 898 aaPredicted RBP10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 LTBP4Q8N2S1 1624 aa10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 IRS4O14654 1257 aaPredicted RBP10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 NMIQ13287 307 aaPredicted RBP10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 PRPF40BQ6NWY9 871 aaKnown RBP10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 LDHAL6AQ6ZMR3 332 aa10.66□□□□□ -0.7
MTHFD1-201ENST00000216605 CLGNO14967 610 aa10.65□□□□□ -0.7
MTHFD1-201ENST00000216605 PCCAP05165 728 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-201ENST00000216605 IL6STP40189 918 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-201ENST00000216605 FKBP4Q02790 459 aaKnown RBP eCLIP10.65□□□□□ -0.7
MTHFD1-201ENST00000216605 METTL24Q5JXM2 366 aa10.65□□□□□ -0.7
MTHFD1-201ENST00000216605 DISP2A7MBM2 1401 aa10.65□□□□□ -0.7
MTHFD1-201ENST00000216605 TNS2Q63HR2 1409 aa10.65□□□□□ -0.7
MTHFD1-201ENST00000216605 AFDNP55196 1824 aaKnown RBP10.65□□□□□ -0.7
MTHFD1-201ENST00000216605 ZKSCAN1P17029 563 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-201ENST00000216605 BICDL1Q6ZP65 573 aa10.65□□□□□ -0.7
MTHFD1-201ENST00000216605 NLRP10Q86W26 655 aa10.65□□□□□ -0.7
MTHFD1-201ENST00000216605 SMARCC1Q92922 1105 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-201ENST00000216605 N4BP2Q86UW6 1770 aaPredicted RBP10.65□□□□□ -0.7
MTHFD1-201ENST00000216605 GOLIM4O00461 696 aa10.64□□□□□ -0.71
MTHFD1-201ENST00000216605 NPHP1O15259 732 aa10.64□□□□□ -0.71
MTHFD1-201ENST00000216605 LARP6Q9BRS8 491 aaKnown RBP10.64□□□□□ -0.71
MTHFD1-201ENST00000216605 USP42Q9H9J4 1324 aaKnown RBP10.64□□□□□ -0.71
MTHFD1-201ENST00000216605 A0A1B0GUL7 405 aa10.64□□□□□ -0.71
MTHFD1-201ENST00000216605 ANKRD18BA2A2Z9 1011 aa10.64□□□□□ -0.71
MTHFD1-201ENST00000216605 IFIT1P09914 478 aaKnown RBP10.64□□□□□ -0.71
MTHFD1-201ENST00000216605 CCDC158Q5M9N0 1113 aa10.64□□□□□ -0.71
MTHFD1-201ENST00000216605 TTC39AQ5SRH9 613 aa10.64□□□□□ -0.71
MTHFD1-201ENST00000216605 SNRKQ9NRH2 765 aa10.64□□□□□ -0.71
MTHFD1-201ENST00000216605 HCLS1P14317 486 aaPredicted RBP10.64□□□□□ -0.71
MTHFD1-201ENST00000216605 ITGA6P23229 1130 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms