RNA–Protein interactions for RNA: ENST00000216513.4

SIX4-201, Transcript of SIX homeobox 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX4, Length 6,285 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX4-201ENST00000216513 HIBADHP31937 336 aaKnown RBP16.04■□□□□ 0.16
SIX4-201ENST00000216513 KIF5BP33176 963 aa16.04■□□□□ 0.16
SIX4-201ENST00000216513 EN1Q05925 392 aaPredicted RBP16.04■□□□□ 0.16
SIX4-201ENST00000216513 TCP10Q12799 353 aa16.04■□□□□ 0.16
SIX4-201ENST00000216513 STIM1Q13586 685 aa16.04■□□□□ 0.16
SIX4-201ENST00000216513 NOD1Q9Y239 953 aa16.04■□□□□ 0.16
SIX4-201ENST00000216513 PHACTR3Q96KR7 559 aa16.04■□□□□ 0.16
SIX4-201ENST00000216513 MAPKBP1O60336 1514 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 NEBLO76041 1014 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 DLGAP5Q15398 846 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 MAGEB6Q8N7X4 407 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 GUCY1B3Q02153 619 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 ERCC6L2Q5T890 1561 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 KIF22Q14807 665 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 PIK3C2GO75747 1445 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 METP08581 1390 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 PHAXQ9H814 394 aaKnown RBP16.03■□□□□ 0.16
SIX4-201ENST00000216513 NLRP1Q9C000 1473 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 LOC102724428A0A0B4J2F2 783 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 BAG4O95429 457 aaKnown RBP16.03■□□□□ 0.16
SIX4-201ENST00000216513 SIK1P57059 783 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 SULF1Q8IWU6 871 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 SMCR8Q8TEV9 937 aaPredicted RBP16.03■□□□□ 0.16
SIX4-201ENST00000216513 TRIM5Q9C035 493 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 MAGI2Q86UL8 1455 aa16.03■□□□□ 0.16
SIX4-201ENST00000216513 TAF5LO75529 589 aa16.02■□□□□ 0.16
SIX4-201ENST00000216513 DOK7Q18PE1 504 aa16.02■□□□□ 0.16
SIX4-201ENST00000216513 ALDH1L1O75891 902 aa16.02■□□□□ 0.15
SIX4-201ENST00000216513 SSRP1Q08945 709 aaKnown RBP16.02■□□□□ 0.15
SIX4-201ENST00000216513 EDC4Q6P2E9 1401 aaKnown RBP16.02■□□□□ 0.15
SIX4-201ENST00000216513 KDM5DQ9BY66 1539 aa16.02■□□□□ 0.15
SIX4-201ENST00000216513 FERMT3Q86UX7 667 aa16.02■□□□□ 0.15
SIX4-201ENST00000216513 TEX11Q8IYF3 940 aa16.02■□□□□ 0.15
SIX4-201ENST00000216513 TRIM27P14373 513 aa16.02■□□□□ 0.15
SIX4-201ENST00000216513 RABEP1Q15276 862 aa16.02■□□□□ 0.15
SIX4-201ENST00000216513 EVI5LQ96CN4 794 aa16.02■□□□□ 0.15
SIX4-201ENST00000216513 PDE8AO60658 829 aa16.01■□□□□ 0.15
SIX4-201ENST00000216513 SP4Q02446 784 aa16.01■□□□□ 0.15
SIX4-201ENST00000216513 B4DLN1 442 aa16.01■□□□□ 0.15
SIX4-201ENST00000216513 MCM2P49736 904 aa16.01■□□□□ 0.15
SIX4-201ENST00000216513 MRPL12P52815 198 aaKnown RBP16.01■□□□□ 0.15
SIX4-201ENST00000216513 PLBD2Q8NHP8 589 aa16.01■□□□□ 0.15
SIX4-201ENST00000216513 ZBTB9Q96C00 473 aa16.01■□□□□ 0.15
SIX4-201ENST00000216513 NAT10Q9H0A0 1025 aaKnown RBP16.01■□□□□ 0.15
SIX4-201ENST00000216513 TMX1Q9H3N1 280 aa16.01■□□□□ 0.15
SIX4-201ENST00000216513 ERVV-2B6SEH9 535 aa16.01■□□□□ 0.15
SIX4-201ENST00000216513 CNKSR1Q969H4 720 aa16.01■□□□□ 0.15
SIX4-201ENST00000216513 TMEM266Q2M3C6 531 aa16.01■□□□□ 0.15
SIX4-201ENST00000216513 LINS1Q8NG48 757 aa16.01■□□□□ 0.15
SIX4-201ENST00000216513 CSADQ9Y600 493 aa16.01■□□□□ 0.15
SIX4-201ENST00000216513 CCT2P78371 535 aaKnown RBP16■□□□□ 0.15
SIX4-201ENST00000216513 DNAI2Q9GZS0 605 aa16■□□□□ 0.15
SIX4-201ENST00000216513 CCDC70Q6NSX1 233 aa16■□□□□ 0.15
SIX4-201ENST00000216513 MICU3Q86XE3 530 aa16■□□□□ 0.15
SIX4-201ENST00000216513 MEIS3Q99687 375 aa16■□□□□ 0.15
SIX4-201ENST00000216513 CEP57L1Q8IYX8 460 aa15.99■□□□□ 0.15
SIX4-201ENST00000216513 UPF3BQ9BZI7 483 aaKnown RBP15.99■□□□□ 0.15
SIX4-201ENST00000216513 ASXL1Q8IXJ9 1541 aa15.99■□□□□ 0.15
SIX4-201ENST00000216513 MYCP01106 439 aaPredicted RBP15.99■□□□□ 0.15
SIX4-201ENST00000216513 CCDC12Q8WUD4 166 aaPredicted RBP15.99■□□□□ 0.15
SIX4-201ENST00000216513 SMARCC2Q8TAQ2 1214 aa15.99■□□□□ 0.15
SIX4-201ENST00000216513 HOOK2Q96ED9 719 aa15.99■□□□□ 0.15
SIX4-201ENST00000216513 DDX21Q9NR30 783 aaKnown RBP eCLIP15.99■□□□□ 0.15
SIX4-201ENST00000216513 DALRD3Q5D0E6 543 aaKnown RBP15.99■□□□□ 0.15
SIX4-201ENST00000216513 IFIT1BQ5T764 474 aaKnown RBP15.99■□□□□ 0.15
SIX4-201ENST00000216513 CARD14Q9BXL6 1004 aa15.99■□□□□ 0.15
SIX4-201ENST00000216513 ZNF496Q96IT1 587 aaPredicted RBP15.98■□□□□ 0.15
SIX4-201ENST00000216513 PPP4R3BQ5MIZ7 849 aa15.98■□□□□ 0.15
SIX4-201ENST00000216513 CARD10Q9BWT7 1032 aa15.98■□□□□ 0.15
SIX4-201ENST00000216513 DENND2AQ9ULE3 1009 aa15.98■□□□□ 0.15
SIX4-201ENST00000216513 R3HDM1Q15032 1099 aaKnown RBP15.98■□□□□ 0.15
SIX4-201ENST00000216513 FILIP1LQ4L180 1135 aa15.98■□□□□ 0.15
SIX4-201ENST00000216513 EIF2AK4Q9P2K8 1649 aaKnown RBP15.98■□□□□ 0.15
SIX4-201ENST00000216513 CRKLP46109 303 aaKnown RBP15.98■□□□□ 0.15
SIX4-201ENST00000216513 TFCP2Q12800 502 aa15.98■□□□□ 0.15
SIX4-201ENST00000216513 FAM43AQ8N2R8 423 aa15.98■□□□□ 0.15
SIX4-201ENST00000216513 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP15.98■□□□□ 0.15
SIX4-201ENST00000216513 GTF2IP78347 998 aa15.98■□□□□ 0.15
SIX4-201ENST00000216513 BICC1Q9H694 974 aaKnown RBP15.98■□□□□ 0.15
SIX4-201ENST00000216513 PHKG2P15735 406 aa15.97■□□□□ 0.15
SIX4-201ENST00000216513 GPHNQ9NQX3 736 aaPredicted RBP15.97■□□□□ 0.15
SIX4-201ENST00000216513 RAB34Q9BZG1 259 aa15.97■□□□□ 0.15
SIX4-201ENST00000216513 ASAP1Q9ULH1 1129 aa15.97■□□□□ 0.15
SIX4-201ENST00000216513 CEP131Q9UPN4 1083 aa15.97■□□□□ 0.15
SIX4-201ENST00000216513 TCOF1Q13428 1488 aaKnown RBP15.97■□□□□ 0.15
SIX4-201ENST00000216513 PLEKHG3A1L390 1219 aa15.97■□□□□ 0.15
SIX4-201ENST00000216513 ZNF594Q96JF6 807 aaPredicted RBP15.97■□□□□ 0.15
SIX4-201ENST00000216513 RHPN1Q8TCX5 695 aa15.97■□□□□ 0.15
SIX4-201ENST00000216513 HEATR3Q7Z4Q2 680 aa15.97■□□□□ 0.15
SIX4-201ENST00000216513 IRX3P78415 501 aaPredicted RBP15.96■□□□□ 0.15
SIX4-201ENST00000216513 RALGAPBQ86X10 1494 aa15.96■□□□□ 0.15
SIX4-201ENST00000216513 EP400NLQ6ZTU2 488 aa15.96■□□□□ 0.15
SIX4-201ENST00000216513 MAST3O60307 1309 aa15.96■□□□□ 0.15
SIX4-201ENST00000216513 NKTRP30414 1462 aaKnown RBP15.96■□□□□ 0.15
SIX4-201ENST00000216513 DESP17661 470 aa15.96■□□□□ 0.15
SIX4-201ENST00000216513 TTC6Q86TZ1 520 aa15.96■□□□□ 0.15
SIX4-201ENST00000216513 CCDC83Q8IWF9 413 aa15.96■□□□□ 0.15
SIX4-201ENST00000216513 HECW2Q9P2P5 1572 aa15.96■□□□□ 0.14
SIX4-201ENST00000216513 BICD1Q96G01 975 aa15.96■□□□□ 0.14
SIX4-201ENST00000216513 ZFYVE9O95405 1425 aa15.95■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms