RNA–Protein interactions for RNA: ENST00000191018.9

CTSA-201, Transcript of cathepsin A, humanhuman

TSL 1 (best) BASIC

Gene CTSA, Length 1,898 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-201ENST00000191018 ZNF609O15014 1411 aa22.55■■□□□ 1.2
CTSA-201ENST00000191018 DDIT3P35638 169 aa22.55■■□□□ 1.2
CTSA-201ENST00000191018 MYT1Q01538 1121 aa22.55■■□□□ 1.2
CTSA-201ENST00000191018 SPRYD3Q8NCJ5 442 aa22.55■■□□□ 1.2
CTSA-201ENST00000191018 PUS3Q9BZE2 481 aaKnown RBP22.55■■□□□ 1.2
CTSA-201ENST00000191018 LSG1Q9H089 658 aaKnown RBP22.55■■□□□ 1.2
CTSA-201ENST00000191018 TRMT112Q9UI30 125 aaKnown RBP22.55■■□□□ 1.2
CTSA-201ENST00000191018 HIP1O00291 1037 aa22.54■■□□□ 1.2
CTSA-201ENST00000191018 ATRNO75882 1429 aa22.54■■□□□ 1.2
CTSA-201ENST00000191018 HSPA4P34932 840 aa22.54■■□□□ 1.2
CTSA-201ENST00000191018 MEX3CQ5U5Q3 659 aaKnown RBP22.54■■□□□ 1.2
CTSA-201ENST00000191018 SBF2Q86WG5 1849 aa22.54■■□□□ 1.2
CTSA-201ENST00000191018 TTLL11Q8NHH1 800 aa22.54■■□□□ 1.2
CTSA-201ENST00000191018 PALD1Q9ULE6 856 aa22.54■■□□□ 1.2
CTSA-201ENST00000191018 AFF2P51816 1311 aa22.54■■□□□ 1.2
CTSA-201ENST00000191018 IRS4O14654 1257 aaPredicted RBP22.54■■□□□ 1.2
CTSA-201ENST00000191018 CTSWP56202 376 aa22.54■■□□□ 1.2
CTSA-201ENST00000191018 ONECUT3O60422 494 aaPredicted RBP22.53■■□□□ 1.2
CTSA-201ENST00000191018 IFIT5Q13325 482 aaKnown RBP22.53■■□□□ 1.2
CTSA-201ENST00000191018 PTF1AQ7RTS3 328 aa22.53■■□□□ 1.2
CTSA-201ENST00000191018 LINC00116Q8NCU8 138 aa22.53■■□□□ 1.2
CTSA-201ENST00000191018 SNRKQ9NRH2 765 aa22.53■■□□□ 1.2
CTSA-201ENST00000191018 PDE8AO60658 829 aa22.52■■□□□ 1.2
CTSA-201ENST00000191018 LAMB2P55268 1798 aa22.52■■□□□ 1.2
CTSA-201ENST00000191018 CNTNAP4Q9C0A0 1308 aa22.52■■□□□ 1.19
CTSA-201ENST00000191018 AK7Q96M32 723 aa22.51■■□□□ 1.19
CTSA-201ENST00000191018 LY75O60449 1722 aa22.51■■□□□ 1.19
CTSA-201ENST00000191018 DDX60Q8IY21 1712 aaKnown RBP22.51■■□□□ 1.19
CTSA-201ENST00000191018 RFX7Q2KHR2 1363 aa22.51■■□□□ 1.19
CTSA-201ENST00000191018 ST18O60284 1047 aa22.51■■□□□ 1.19
CTSA-201ENST00000191018 HAUS7Q99871 368 aa22.51■■□□□ 1.19
CTSA-201ENST00000191018 CHMP5Q9NZZ3 219 aa22.51■■□□□ 1.19
CTSA-201ENST00000191018 TIMM10P62072 90 aa22.5■■□□□ 1.19
CTSA-201ENST00000191018 PARP10Q53GL7 1025 aa22.5■■□□□ 1.19
CTSA-201ENST00000191018 SUSD4Q5VX71 490 aa22.5■■□□□ 1.19
CTSA-201ENST00000191018 CCDC85AQ96PX6 553 aaPredicted RBP22.5■■□□□ 1.19
CTSA-201ENST00000191018 GREM2Q9H772 168 aa22.5■■□□□ 1.19
CTSA-201ENST00000191018 LRP5O75197 1615 aa22.5■■□□□ 1.19
CTSA-201ENST00000191018 ITGA6P23229 1130 aa22.49■■□□□ 1.19
CTSA-201ENST00000191018 FSD1Q9BTV5 496 aa22.49■■□□□ 1.19
CTSA-201ENST00000191018 CEP126Q9P2H0 1117 aa22.49■■□□□ 1.19
CTSA-201ENST00000191018 A0A1B0GUL7 405 aa22.49■■□□□ 1.19
CTSA-201ENST00000191018 KIAA1211Q6ZU35 1233 aa22.49■■□□□ 1.19
CTSA-201ENST00000191018 NEUROD6Q96NK8 337 aa22.49■■□□□ 1.19
CTSA-201ENST00000191018 TRPC5Q9UL62 973 aaPredicted RBP22.49■■□□□ 1.19
CTSA-201ENST00000191018 SCN7AQ01118 1682 aa22.49■■□□□ 1.19
CTSA-201ENST00000191018 SPEF2Q9C093 1822 aa22.49■■□□□ 1.19
CTSA-201ENST00000191018 SH3TC1Q8TE82 1336 aa22.48■■□□□ 1.19
CTSA-201ENST00000191018 RIC1Q4ADV7 1423 aa22.48■■□□□ 1.19
CTSA-201ENST00000191018 NMIQ13287 307 aaPredicted RBP22.48■■□□□ 1.19
CTSA-201ENST00000191018 TAF7LQ5H9L4 462 aa22.48■■□□□ 1.19
CTSA-201ENST00000191018 FAM227BQ96M60 508 aa22.48■■□□□ 1.19
CTSA-201ENST00000191018 RIPOR2Q9Y4F9 1068 aa22.48■■□□□ 1.19
CTSA-201ENST00000191018 TAF1LQ8IZX4 1826 aa22.48■■□□□ 1.19
CTSA-201ENST00000191018 ANKRD18BA2A2Z9 1011 aa22.47■■□□□ 1.19
CTSA-201ENST00000191018 IL27Q8NEV9 243 aa22.47■■□□□ 1.19
CTSA-201ENST00000191018 EDC3Q96F86 508 aaKnown RBP22.47■■□□□ 1.19
CTSA-201ENST00000191018 CLEC4GQ6UXB4 293 aa22.47■■□□□ 1.19
CTSA-201ENST00000191018 UTP14AQ9BVJ6 771 aaKnown RBP22.47■■□□□ 1.19
CTSA-201ENST00000191018 AKAP2Q9Y2D5 859 aa22.47■■□□□ 1.19
CTSA-201ENST00000191018 MED23Q9ULK4 1368 aa22.47■■□□□ 1.19
CTSA-201ENST00000191018 RGL2O15211 777 aa22.46■■□□□ 1.19
CTSA-201ENST00000191018 RC3H1Q5TC82 1133 aaKnown RBP22.46■■□□□ 1.19
CTSA-201ENST00000191018 CIZ1Q9ULV3 898 aaPredicted RBP22.46■■□□□ 1.19
CTSA-201ENST00000191018 FRAT2O75474 233 aaPredicted RBP22.45■■□□□ 1.19
CTSA-201ENST00000191018 NTSR2O95665 410 aa22.45■■□□□ 1.19
CTSA-201ENST00000191018 NEK4P51957 841 aa22.45■■□□□ 1.19
CTSA-201ENST00000191018 PTH1RQ03431 593 aa22.45■■□□□ 1.19
CTSA-201ENST00000191018 FAM182BQ5T319 152 aa22.45■■□□□ 1.19
CTSA-201ENST00000191018 PPIL4Q8WUA2 492 aaKnown RBP eCLIP22.45■■□□□ 1.19
CTSA-201ENST00000191018 ZNF652Q9Y2D9 606 aa22.45■■□□□ 1.19
CTSA-201ENST00000191018 A0A0D9SFI3 127 aa22.45■■□□□ 1.18
CTSA-201ENST00000191018 KCNQ4P56696 695 aa22.45■■□□□ 1.18
CTSA-201ENST00000191018 TICAM2Q86XR7 235 aa22.45■■□□□ 1.18
CTSA-201ENST00000191018 NIP7Q9Y221 180 aaKnown RBP eCLIP22.45■■□□□ 1.18
CTSA-201ENST00000191018 CCDC171Q6TFL3 1326 aa22.44■■□□□ 1.18
CTSA-201ENST00000191018 LDHAL6AQ6ZMR3 332 aa22.44■■□□□ 1.18
CTSA-201ENST00000191018 KCNB2Q92953 911 aa22.44■■□□□ 1.18
CTSA-201ENST00000191018 SNX14Q9Y5W7 946 aa22.44■■□□□ 1.18
CTSA-201ENST00000191018 NDUFB9Q9Y6M9 179 aa22.44■■□□□ 1.18
CTSA-201ENST00000191018 HSP90AA1P07900 732 aaKnown RBP22.43■■□□□ 1.18
CTSA-201ENST00000191018 MCM2P49736 904 aa22.43■■□□□ 1.18
CTSA-201ENST00000191018 KBTBD3Q8NAB2 608 aa22.43■■□□□ 1.18
CTSA-201ENST00000191018 DNAJC2Q99543 621 aaKnown RBP22.43■■□□□ 1.18
CTSA-201ENST00000191018 SEPT12Q8IYM1 358 aa22.43■■□□□ 1.18
CTSA-201ENST00000191018 VGLL2Q8N8G2 317 aa22.43■■□□□ 1.18
CTSA-201ENST00000191018 RASEFQ8IZ41 740 aa22.42■■□□□ 1.18
CTSA-201ENST00000191018 MAP4K1Q92918 833 aa22.42■■□□□ 1.18
CTSA-201ENST00000191018 RPS6KA4O75676 772 aa22.41■■□□□ 1.18
CTSA-201ENST00000191018 HCLS1P14317 486 aaPredicted RBP22.41■■□□□ 1.18
CTSA-201ENST00000191018 NECTIN1Q15223 517 aa22.41■■□□□ 1.18
CTSA-201ENST00000191018 XAGE2Q96GT9 111 aa22.41■■□□□ 1.18
CTSA-201ENST00000191018 PAG1Q9NWQ8 432 aa22.41■■□□□ 1.18
CTSA-201ENST00000191018 RTL9Q8NET4 1388 aa22.41■■□□□ 1.18
CTSA-201ENST00000191018 HSP90B1P14625 803 aaKnown RBP22.41■■□□□ 1.18
CTSA-201ENST00000191018 METTL24Q5JXM2 366 aa22.41■■□□□ 1.18
CTSA-201ENST00000191018 DDX46Q7L014 1031 aaKnown RBP22.41■■□□□ 1.18
CTSA-201ENST00000191018 CASZ1Q86V15 1759 aa22.41■■□□□ 1.18
CTSA-201ENST00000191018 ABCC12Q96J65 1359 aa22.4■■□□□ 1.18
CTSA-201ENST00000191018 ARAP2Q8WZ64 1704 aa22.4■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms