RNA–Protein interactions for RNA: ENST00000157600.7

LMCD1-201, Transcript of LIM and cysteine rich domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LMCD1, Length 8,405 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-201ENST00000157600 EXOC1Q9NV70 894 aa14.38□□□□□ -0.11
LMCD1-201ENST00000157600 SYKP43405 635 aa14.37□□□□□ -0.11
LMCD1-201ENST00000157600 SMARCC1Q92922 1105 aaPredicted RBP14.37□□□□□ -0.11
LMCD1-201ENST00000157600 TDRD12Q587J7 1177 aaKnown RBP14.37□□□□□ -0.11
LMCD1-201ENST00000157600 RAD50Q92878 1312 aa14.37□□□□□ -0.11
LMCD1-201ENST00000157600 CCDC96Q2M329 555 aa14.37□□□□□ -0.11
LMCD1-201ENST00000157600 CEP112Q8N8E3 955 aa14.37□□□□□ -0.11
LMCD1-201ENST00000157600 SELENOOQ9BVL4 669 aa14.37□□□□□ -0.11
LMCD1-201ENST00000157600 MBIPQ9NS73 344 aa14.37□□□□□ -0.11
LMCD1-201ENST00000157600 RTL9Q8NET4 1388 aa14.37□□□□□ -0.11
LMCD1-201ENST00000157600 RASAL2Q9UJF2 1139 aa14.37□□□□□ -0.11
LMCD1-201ENST00000157600 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.36□□□□□ -0.11
LMCD1-201ENST00000157600 AMOTL2Q9Y2J4 779 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 NPC1L1Q9UHC9 1359 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 PPP1R2P41236 205 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 USP16Q9Y5T5 823 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 C16orf45Q96MC5 204 aaPredicted RBP14.36□□□□□ -0.11
LMCD1-201ENST00000157600 ARFGAP3Q9NP61 516 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 BABAM1Q9NWV8 329 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 CTNNA2P26232 953 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 SPECC1Q5M775 1068 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 CEP135Q66GS9 1140 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 NME9Q86XW9 330 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 CERS3Q8IU89 383 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 CCDC184Q52MB2 194 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 DDX46Q7L014 1031 aaKnown RBP14.36□□□□□ -0.11
LMCD1-201ENST00000157600 WAPLQ7Z5K2 1190 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 ANKRD44Q8N8A2 993 aa14.36□□□□□ -0.11
LMCD1-201ENST00000157600 ACTN2P35609 894 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 C6orf163Q5TEZ5 329 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 ORC3Q9UBD5 711 aaPredicted RBP14.35□□□□□ -0.11
LMCD1-201ENST00000157600 TNRQ92752 1358 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 TMC6Q7Z403 805 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 ZMYM4Q5VZL5 1548 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 PLCG2P16885 1265 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 ZC3H6P61129 1189 aaKnown RBP14.35□□□□□ -0.11
LMCD1-201ENST00000157600 CCDC40Q4G0X9 1142 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 ADGRF5Q8IZF2 1346 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 BICDL2A1A5D9 508 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 PTCD1O75127 700 aaKnown RBP14.35□□□□□ -0.11
LMCD1-201ENST00000157600 IL15P40933 162 aaPredicted RBP14.35□□□□□ -0.11
LMCD1-201ENST00000157600 WTAPQ15007 396 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 LDHAL6AQ6ZMR3 332 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 BRAPQ7Z569 592 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 FLT4P35916 1363 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 SSFA2P28290 1259 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 MCMDC2Q4G0Z9 681 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 UBE3BQ7Z3V4 1068 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 WDR7Q9Y4E6 1490 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 EXOC5O00471 708 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 IDI1Q13907 227 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 ZSCAN23Q3MJ62 389 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 STK11IPQ8N1F8 1099 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 LMBR1Q8WVP7 490 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 BCL11BQ9C0K0 894 aaPredicted RBP14.35□□□□□ -0.11
LMCD1-201ENST00000157600 NSRP1Q9H0G5 558 aaKnown RBP14.35□□□□□ -0.11
LMCD1-201ENST00000157600 USP25Q9UHP3 1055 aa14.35□□□□□ -0.11
LMCD1-201ENST00000157600 TBCAO75347 108 aaKnown RBP14.34□□□□□ -0.11
LMCD1-201ENST00000157600 IKBKGQ9Y6K9 419 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 PSMA7O14818 248 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 SMARCA5O60264 1052 aaPredicted RBP14.34□□□□□ -0.11
LMCD1-201ENST00000157600 CCDC174Q6PII3 467 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 ANKRD13DQ6ZTN6 518 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 FBXO3Q9UK99 471 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 ZBTB43O43298 467 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 CCDC155Q8N6L0 562 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 MIS18AQ9NYP9 233 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 TSPY2A6NKD2 308 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 GRM8O00222 908 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 MSH6P52701 1360 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 B4DLN1 442 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 MRPL12P52815 198 aaKnown RBP14.34□□□□□ -0.11
LMCD1-201ENST00000157600 KRT83P78385 493 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 ANKS4BQ8N8V4 417 aa14.34□□□□□ -0.11
LMCD1-201ENST00000157600 CTAGE9A4FU28 777 aa14.33□□□□□ -0.11
LMCD1-201ENST00000157600 CKAP2LQ8IYA6 745 aa14.33□□□□□ -0.11
LMCD1-201ENST00000157600 KIF4AO95239 1232 aa14.33□□□□□ -0.11
LMCD1-201ENST00000157600 C20orf194Q5TEA3 1177 aa14.33□□□□□ -0.11
LMCD1-201ENST00000157600 KRT222Q8N1A0 295 aa14.33□□□□□ -0.11
LMCD1-201ENST00000157600 CABP5Q9NP86 173 aa14.33□□□□□ -0.11
LMCD1-201ENST00000157600 NPHP3Q7Z494 1330 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 HLTFQ14527 1009 aaKnown RBP eCLIP14.33□□□□□ -0.12
LMCD1-201ENST00000157600 CEP128Q6ZU80 1094 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 FERMT2Q96AC1 680 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 TTC14Q96N46 770 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 PHF23Q9BUL5 403 aaPredicted RBP14.33□□□□□ -0.12
LMCD1-201ENST00000157600 THUMPD2Q9BTF0 503 aaKnown RBP14.33□□□□□ -0.12
LMCD1-201ENST00000157600 UBASH3AP57075 661 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 MRPS27Q92552 414 aaKnown RBP14.33□□□□□ -0.12
LMCD1-201ENST00000157600 TSGA10Q9BZW7 698 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 A6NNZ2 444 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 MYO1BO43795 1136 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 HSF2BPO75031 334 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 TUBB8Q3ZCM7 444 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 SPATA24Q86W54 205 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 RHPN1Q8TCX5 695 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 JADE2Q9NQC1 790 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 ABCA5Q8WWZ7 1642 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 KIAA0753Q2KHM9 967 aa14.33□□□□□ -0.12
LMCD1-201ENST00000157600 MPRIPQ6WCQ1 1025 aa14.33□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms