RNA–Protein interactions for RNA: ENST00000046640.7

CTNS-201, Transcript of cystinosin, lysosomal cystine transporter, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTNS, Length 2,866 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNS-201ENST00000046640 SCN11AQ9UI33 1791 aa15.7■□□□□ 0.1
CTNS-201ENST00000046640 RPAP1Q9BWH6 1393 aaPredicted RBP15.7■□□□□ 0.1
CTNS-201ENST00000046640 WDR17Q8IZU2 1322 aa15.7■□□□□ 0.1
CTNS-201ENST00000046640 GJB2P29033 226 aa15.7■□□□□ 0.1
CTNS-201ENST00000046640 COPRSQ9NQ92 184 aa15.7■□□□□ 0.1
CTNS-201ENST00000046640 UQCRHLA0A096LP55 91 aa15.69■□□□□ 0.1
CTNS-201ENST00000046640 FIBPO43427 364 aa15.69■□□□□ 0.1
CTNS-201ENST00000046640 UQCRHP07919 91 aa15.69■□□□□ 0.1
CTNS-201ENST00000046640 MAP4K1Q92918 833 aa15.69■□□□□ 0.1
CTNS-201ENST00000046640 IL17RAQ96F46 866 aa15.69■□□□□ 0.1
CTNS-201ENST00000046640 TPCN1Q9ULQ1 816 aa15.69■□□□□ 0.1
CTNS-201ENST00000046640 ZKSCAN5Q9Y2L8 839 aa15.69■□□□□ 0.1
CTNS-201ENST00000046640 TCHHQ07283 1943 aa15.69■□□□□ 0.1
CTNS-201ENST00000046640 VPS37CA5D8V6 355 aaPredicted RBP15.69■□□□□ 0.1
CTNS-201ENST00000046640 STX6O43752 255 aa15.69■□□□□ 0.1
CTNS-201ENST00000046640 MBD3O95983 291 aa15.69■□□□□ 0.1
CTNS-201ENST00000046640 DNTTIP2Q5QJE6 756 aaKnown RBP15.69■□□□□ 0.1
CTNS-201ENST00000046640 ZSWIM6Q9HCJ5 1215 aa15.69■□□□□ 0.1
CTNS-201ENST00000046640 EPB41L2O43491 1005 aaKnown RBP15.69■□□□□ 0.1
CTNS-201ENST00000046640 COL18A1P39060 1754 aa15.69■□□□□ 0.1
CTNS-201ENST00000046640 PCDH11XQ9BZA7 1347 aa15.68■□□□□ 0.1
CTNS-201ENST00000046640 PCDH11YQ9BZA8 1340 aa15.68■□□□□ 0.1
CTNS-201ENST00000046640 IL2RBP14784 551 aa15.68■□□□□ 0.1
CTNS-201ENST00000046640 LRRC24Q50LG9 513 aa15.68■□□□□ 0.1
CTNS-201ENST00000046640 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.68■□□□□ 0.1
CTNS-201ENST00000046640 ST3GAL1Q11201 340 aa15.68■□□□□ 0.1
CTNS-201ENST00000046640 FERMT3Q86UX7 667 aa15.68■□□□□ 0.1
CTNS-201ENST00000046640 ZSCAN22P10073 491 aaPredicted RBP15.67■□□□□ 0.1
CTNS-201ENST00000046640 CASP7P55210 303 aa15.67■□□□□ 0.1
CTNS-201ENST00000046640 FOXO4P98177 505 aa15.67■□□□□ 0.1
CTNS-201ENST00000046640 VPS53Q5VIR6 699 aa15.67■□□□□ 0.1
CTNS-201ENST00000046640 KAT6BQ8WYB5 2073 aa15.67■□□□□ 0.1
CTNS-201ENST00000046640 C17orf53Q8N3J3 647 aaPredicted RBP15.67■□□□□ 0.1
CTNS-201ENST00000046640 LRRC2Q9BYS8 371 aa15.67■□□□□ 0.1
CTNS-201ENST00000046640 PUS3Q9BZE2 481 aaKnown RBP15.67■□□□□ 0.1
CTNS-201ENST00000046640 CWC25Q9NXE8 425 aaPredicted RBP15.67■□□□□ 0.1
CTNS-201ENST00000046640 CCDC39Q9UFE4 941 aa15.67■□□□□ 0.1
CTNS-201ENST00000046640 USP25Q9UHP3 1055 aa15.67■□□□□ 0.1
CTNS-201ENST00000046640 A0A0G2JS52 829 aa15.66■□□□□ 0.1
CTNS-201ENST00000046640 HIP1O00291 1037 aa15.66■□□□□ 0.1
CTNS-201ENST00000046640 GOLIM4O00461 696 aa15.66■□□□□ 0.1
CTNS-201ENST00000046640 RABL6Q3YEC7 729 aaPredicted RBP15.66■□□□□ 0.1
CTNS-201ENST00000046640 FAM173BQ6P4H8 233 aa15.66■□□□□ 0.1
CTNS-201ENST00000046640 DNAJC5Q9H3Z4 198 aa15.66■□□□□ 0.1
CTNS-201ENST00000046640 BLOC1S2Q6QNY1 142 aa15.66■□□□□ 0.1
CTNS-201ENST00000046640 ASAP1Q9ULH1 1129 aa15.66■□□□□ 0.1
CTNS-201ENST00000046640 ADAMTS7Q9UKP4 1686 aa15.66■□□□□ 0.1
CTNS-201ENST00000046640 CPDO75976 1380 aa15.66■□□□□ 0.1
CTNS-201ENST00000046640 PPFIA3O75145 1194 aa15.65■□□□□ 0.1
CTNS-201ENST00000046640 ATP5JP18859 108 aa15.65■□□□□ 0.1
CTNS-201ENST00000046640 DNM1Q05193 864 aaKnown RBP15.65■□□□□ 0.1
CTNS-201ENST00000046640 DCCP43146 1447 aa15.65■□□□□ 0.1
CTNS-201ENST00000046640 COL15A1P39059 1388 aa15.65■□□□□ 0.1
CTNS-201ENST00000046640 TAF5LO75529 589 aa15.65■□□□□ 0.1
CTNS-201ENST00000046640 SYNE4Q8N205 404 aa15.65■□□□□ 0.1
CTNS-201ENST00000046640 H7C1W4 665 aa15.65■□□□□ 0.1
CTNS-201ENST00000046640 ZNF500O60304 480 aaPredicted RBP15.65■□□□□ 0.1
CTNS-201ENST00000046640 SYTL4Q96C24 671 aaPredicted RBP15.65■□□□□ 0.1
CTNS-201ENST00000046640 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP15.65■□□□□ 0.1
CTNS-201ENST00000046640 F13A1P00488 732 aa15.64■□□□□ 0.09
CTNS-201ENST00000046640 TSC1Q92574 1164 aa15.64■□□□□ 0.09
CTNS-201ENST00000046640 SYAP1Q96A49 352 aaPredicted RBP15.64■□□□□ 0.09
CTNS-201ENST00000046640 FAM89AQ96GI7 184 aa15.64■□□□□ 0.09
CTNS-201ENST00000046640 PDCL3Q9H2J4 239 aa15.64■□□□□ 0.09
CTNS-201ENST00000046640 SNRKQ9NRH2 765 aa15.64■□□□□ 0.09
CTNS-201ENST00000046640 HCLS1P14317 486 aaPredicted RBP15.64■□□□□ 0.09
CTNS-201ENST00000046640 HS1BP3Q53T59 392 aa15.64■□□□□ 0.09
CTNS-201ENST00000046640 RNF20Q5VTR2 975 aa15.64■□□□□ 0.09
CTNS-201ENST00000046640 ATG9AQ7Z3C6 839 aa15.64■□□□□ 0.09
CTNS-201ENST00000046640 DNAJC10Q8IXB1 793 aa15.63■□□□□ 0.09
CTNS-201ENST00000046640 TTC12Q9H892 705 aaPredicted RBP15.63■□□□□ 0.09
CTNS-201ENST00000046640 TMOD3Q9NYL9 352 aa15.63■□□□□ 0.09
CTNS-201ENST00000046640 A0A0G2JLW4 131 aa15.63■□□□□ 0.09
CTNS-201ENST00000046640 ERVV-2B6SEH9 535 aa15.63■□□□□ 0.09
CTNS-201ENST00000046640 GPTP24298 496 aa15.63■□□□□ 0.09
CTNS-201ENST00000046640 LARP1BQ659C4 914 aaKnown RBP15.63■□□□□ 0.09
CTNS-201ENST00000046640 TM6SF1Q9BZW5 370 aa15.63■□□□□ 0.09
CTNS-201ENST00000046640 PSMA5P28066 241 aa15.62■□□□□ 0.09
CTNS-201ENST00000046640 BTG4Q9NY30 223 aa15.62■□□□□ 0.09
CTNS-201ENST00000046640 MTMR6Q9Y217 621 aa15.62■□□□□ 0.09
CTNS-201ENST00000046640 FAM177BA6PVY3 158 aa15.62■□□□□ 0.09
CTNS-201ENST00000046640 KCNB2Q92953 911 aa15.62■□□□□ 0.09
CTNS-201ENST00000046640 CARD10Q9BWT7 1032 aa15.62■□□□□ 0.09
CTNS-201ENST00000046640 RPS6KB1P23443 525 aa15.61■□□□□ 0.09
CTNS-201ENST00000046640 FOSBP53539 338 aa15.61■□□□□ 0.09
CTNS-201ENST00000046640 FKBP4Q02790 459 aaKnown RBP eCLIP15.61■□□□□ 0.09
CTNS-201ENST00000046640 SOS2Q07890 1332 aaPredicted RBP15.61■□□□□ 0.09
CTNS-201ENST00000046640 MED23Q9ULK4 1368 aa15.61■□□□□ 0.09
CTNS-201ENST00000046640 TOB2Q14106 344 aaPredicted RBP15.61■□□□□ 0.09
CTNS-201ENST00000046640 GIMAP6Q6P9H5 292 aa15.61■□□□□ 0.09
CTNS-201ENST00000046640 ZSCAN31Q96LW9 406 aaPredicted RBP15.61■□□□□ 0.09
CTNS-201ENST00000046640 HAUS7Q99871 368 aa15.61■□□□□ 0.09
CTNS-201ENST00000046640 ZNF609O15014 1411 aa15.61■□□□□ 0.09
CTNS-201ENST00000046640 COL5A2P05997 1499 aaPredicted RBP15.61■□□□□ 0.09
CTNS-201ENST00000046640 HSP90B1P14625 803 aaKnown RBP15.61■□□□□ 0.09
CTNS-201ENST00000046640 FGD1P98174 961 aa15.61■□□□□ 0.09
CTNS-201ENST00000046640 CDC37L1Q7L3B6 337 aa15.61■□□□□ 0.09
CTNS-201ENST00000046640 PIGBQ92521 554 aa15.61■□□□□ 0.09
CTNS-201ENST00000046640 SH2B1Q9NRF2 756 aaPredicted RBP15.61■□□□□ 0.09
CTNS-201ENST00000046640 NAP1L2Q9ULW6 460 aaPredicted RBP15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms