RNA–Protein interactions for RNA: ENST00000043402.7

RTN4R-201, Transcript of reticulon 4 receptor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RTN4R, Length 2,157 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-201ENST00000043402 JCADQ9P266 1359 aa31.32■■■□□ 2.6
RTN4R-201ENST00000043402 EYA2O00167 538 aa31.32■■■□□ 2.6
RTN4R-201ENST00000043402 PRPF40AO75400 957 aaKnown RBP31.32■■■□□ 2.6
RTN4R-201ENST00000043402 TIMM10P62072 90 aa31.32■■■□□ 2.6
RTN4R-201ENST00000043402 COL9A3Q14050 684 aaPredicted RBP31.32■■■□□ 2.6
RTN4R-201ENST00000043402 PDRG1Q9NUG6 133 aa31.32■■■□□ 2.6
RTN4R-201ENST00000043402 CCDC9Q9Y3X0 531 aaKnown RBP31.32■■■□□ 2.6
RTN4R-201ENST00000043402 LARGE1O95461 756 aa31.31■■■□□ 2.6
RTN4R-201ENST00000043402 PANK2Q9BZ23 570 aa31.31■■■□□ 2.6
RTN4R-201ENST00000043402 GPR108Q9NPR9 543 aa31.31■■■□□ 2.6
RTN4R-201ENST00000043402 CYP46A1Q9Y6A2 500 aa31.31■■■□□ 2.6
RTN4R-201ENST00000043402 PLCH1Q4KWH8 1693 aa31.31■■■□□ 2.6
RTN4R-201ENST00000043402 TNKS1BP1Q9C0C2 1729 aaKnown RBP31.3■■■□□ 2.6
RTN4R-201ENST00000043402 KIF6Q6ZMV9 814 aa31.3■■■□□ 2.6
RTN4R-201ENST00000043402 NEUROD6Q96NK8 337 aa31.3■■■□□ 2.6
RTN4R-201ENST00000043402 PUS3Q9BZE2 481 aaKnown RBP31.3■■■□□ 2.6
RTN4R-201ENST00000043402 EXOC5O00471 708 aa31.3■■■□□ 2.6
RTN4R-201ENST00000043402 TAF5LO75529 589 aa31.3■■■□□ 2.6
RTN4R-201ENST00000043402 MRE11P49959 708 aa31.3■■■□□ 2.6
RTN4R-201ENST00000043402 RPAP1Q9BWH6 1393 aaPredicted RBP31.29■■■□□ 2.6
RTN4R-201ENST00000043402 ISY1Q9ULR0 285 aaKnown RBP31.29■■■□□ 2.6
RTN4R-201ENST00000043402 TAF6LQ9Y6J9 622 aa31.29■■■□□ 2.6
RTN4R-201ENST00000043402 DDX46Q7L014 1031 aaKnown RBP31.29■■■□□ 2.6
RTN4R-201ENST00000043402 FAM89AQ96GI7 184 aa31.29■■■□□ 2.6
RTN4R-201ENST00000043402 GRPEL1Q9HAV7 217 aa31.29■■■□□ 2.6
RTN4R-201ENST00000043402 RFX7Q2KHR2 1363 aa31.28■■■□□ 2.6
RTN4R-201ENST00000043402 LRP6O75581 1613 aa31.28■■■□□ 2.6
RTN4R-201ENST00000043402 ZNF609O15014 1411 aa31.28■■■□□ 2.6
RTN4R-201ENST00000043402 CIAO1O76071 339 aa31.27■■■□□ 2.6
RTN4R-201ENST00000043402 MAP3K15Q6ZN16 1313 aa31.27■■■□□ 2.6
RTN4R-201ENST00000043402 CYP19A1P11511 503 aaPredicted RBP31.27■■■□□ 2.6
RTN4R-201ENST00000043402 HLFQ16534 295 aa31.27■■■□□ 2.6
RTN4R-201ENST00000043402 PCCAP05165 728 aaPredicted RBP31.26■■■□□ 2.6
RTN4R-201ENST00000043402 GPT2Q8TD30 523 aa31.26■■■□□ 2.6
RTN4R-201ENST00000043402 SEC62Q99442 399 aaKnown RBP31.26■■■□□ 2.6
RTN4R-201ENST00000043402 GIGYF2Q6Y7W6 1299 aaKnown RBP31.26■■■□□ 2.59
RTN4R-201ENST00000043402 SYTL4Q96C24 671 aaPredicted RBP31.26■■■□□ 2.59
RTN4R-201ENST00000043402 KBTBD3Q8NAB2 608 aa31.24■■■□□ 2.59
RTN4R-201ENST00000043402 ZBTB38Q8NAP3 1195 aaPredicted RBP31.24■■■□□ 2.59
RTN4R-201ENST00000043402 WNK3Q9BYP7 1800 aa31.24■■■□□ 2.59
RTN4R-201ENST00000043402 CCDC57Q2TAC2 916 aa31.24■■■□□ 2.59
RTN4R-201ENST00000043402 USPL1Q5W0Q7 1092 aa31.24■■■□□ 2.59
RTN4R-201ENST00000043402 CCDC129Q6ZRS4 1044 aa31.24■■■□□ 2.59
RTN4R-201ENST00000043402 SYNE4Q8N205 404 aa31.24■■■□□ 2.59
RTN4R-201ENST00000043402 A0A1B0GUL7 405 aa31.23■■■□□ 2.59
RTN4R-201ENST00000043402 NCLP19338 710 aaKnown RBP31.23■■■□□ 2.59
RTN4R-201ENST00000043402 RNF20Q5VTR2 975 aa31.23■■■□□ 2.59
RTN4R-201ENST00000043402 PLA2G12BQ9BX93 195 aa31.23■■■□□ 2.59
RTN4R-201ENST00000043402 ZBTB1Q9Y2K1 713 aa31.23■■■□□ 2.59
RTN4R-201ENST00000043402 ZSCAN21Q9Y5A6 473 aaPredicted RBP31.23■■■□□ 2.59
RTN4R-201ENST00000043402 WDR33Q9C0J8 1336 aaKnown RBP31.23■■■□□ 2.59
RTN4R-201ENST00000043402 CAVIN1Q6NZI2 390 aaKnown RBP31.23■■■□□ 2.59
RTN4R-201ENST00000043402 CCDC85AQ96PX6 553 aaPredicted RBP31.23■■■□□ 2.59
RTN4R-201ENST00000043402 ST3GAL1Q11201 340 aa31.22■■■□□ 2.59
RTN4R-201ENST00000043402 CSF1RP07333 972 aa31.22■■■□□ 2.59
RTN4R-201ENST00000043402 PSMA5P28066 241 aa31.22■■■□□ 2.59
RTN4R-201ENST00000043402 PRIM1P49642 420 aaKnown RBP31.22■■■□□ 2.59
RTN4R-201ENST00000043402 ME3Q16798 604 aa31.22■■■□□ 2.59
RTN4R-201ENST00000043402 CCDC83Q8IWF9 413 aa31.22■■■□□ 2.59
RTN4R-201ENST00000043402 GOLIM4O00461 696 aa31.21■■■□□ 2.59
RTN4R-201ENST00000043402 TSGA10IPQ3SY00 556 aa31.21■■■□□ 2.59
RTN4R-201ENST00000043402 MCMDC2Q4G0Z9 681 aa31.21■■■□□ 2.59
RTN4R-201ENST00000043402 ZSCAN31Q96LW9 406 aaPredicted RBP31.21■■■□□ 2.59
RTN4R-201ENST00000043402 PAG1Q9NWQ8 432 aa31.21■■■□□ 2.59
RTN4R-201ENST00000043402 GPTP24298 496 aa31.2■■■□□ 2.59
RTN4R-201ENST00000043402 PALLDQ8WX93 1383 aa31.2■■■□□ 2.59
RTN4R-201ENST00000043402 NLRP10Q86W26 655 aa31.2■■■□□ 2.58
RTN4R-201ENST00000043402 SH2B1Q9NRF2 756 aaPredicted RBP31.2■■■□□ 2.58
RTN4R-201ENST00000043402 HMG20BQ9P0W2 317 aa31.2■■■□□ 2.58
RTN4R-201ENST00000043402 TPCN1Q9ULQ1 816 aa31.2■■■□□ 2.58
RTN4R-201ENST00000043402 NSFL1CQ9UNZ2 370 aaKnown RBP31.2■■■□□ 2.58
RTN4R-201ENST00000043402 DTNBO60941 627 aa31.19■■■□□ 2.58
RTN4R-201ENST00000043402 ADAMTS2O95450 1211 aa31.19■■■□□ 2.58
RTN4R-201ENST00000043402 SLFNL1Q499Z3 407 aa31.19■■■□□ 2.58
RTN4R-201ENST00000043402 SMC3Q9UQE7 1217 aa31.19■■■□□ 2.58
RTN4R-201ENST00000043402 TCEANC2Q96MN5 208 aa31.19■■■□□ 2.58
RTN4R-201ENST00000043402 CEP126Q9P2H0 1117 aa31.19■■■□□ 2.58
RTN4R-201ENST00000043402 SYT1P21579 422 aa31.18■■■□□ 2.58
RTN4R-201ENST00000043402 FOXD4L6Q3SYB3 417 aaPredicted RBP31.18■■■□□ 2.58
RTN4R-201ENST00000043402 BLOC1S2Q6QNY1 142 aa31.18■■■□□ 2.58
RTN4R-201ENST00000043402 FOXD4L3Q6VB84 417 aaPredicted RBP31.18■■■□□ 2.58
RTN4R-201ENST00000043402 DOT1LQ8TEK3 1739 aa31.17■■■□□ 2.58
RTN4R-201ENST00000043402 ZSCAN23Q3MJ62 389 aa31.17■■■□□ 2.58
RTN4R-201ENST00000043402 SH3TC1Q8TE82 1336 aa31.17■■■□□ 2.58
RTN4R-201ENST00000043402 RPS6KB1P23443 525 aa31.17■■■□□ 2.58
RTN4R-201ENST00000043402 RBM27Q9P2N5 1060 aaKnown RBP31.16■■■□□ 2.58
RTN4R-201ENST00000043402 FBXO3Q9UK99 471 aa31.16■■■□□ 2.58
RTN4R-201ENST00000043402 TCHHQ07283 1943 aa31.16■■■□□ 2.58
RTN4R-201ENST00000043402 SPATA31A1Q5TZJ5 1347 aa31.16■■■□□ 2.58
RTN4R-201ENST00000043402 CDHR2Q9BYE9 1310 aa31.16■■■□□ 2.58
RTN4R-201ENST00000043402 STX6O43752 255 aa31.16■■■□□ 2.58
RTN4R-201ENST00000043402 IFIT1P09914 478 aaKnown RBP31.16■■■□□ 2.58
RTN4R-201ENST00000043402 ZNF445P59923 1031 aa31.16■■■□□ 2.58
RTN4R-201ENST00000043402 NECAB1Q8N987 351 aa31.16■■■□□ 2.58
RTN4R-201ENST00000043402 LTBP4Q8N2S1 1624 aa31.15■■■□□ 2.58
RTN4R-201ENST00000043402 IFIT5Q13325 482 aaKnown RBP31.15■■■□□ 2.58
RTN4R-201ENST00000043402 GJB2P29033 226 aa31.15■■■□□ 2.58
RTN4R-201ENST00000043402 ANKRD36CQ5JPF3 1778 aa31.14■■■□□ 2.58
RTN4R-201ENST00000043402 ZSCAN22P10073 491 aaPredicted RBP31.14■■■□□ 2.58
RTN4R-201ENST00000043402 ADORA1P30542 326 aa31.14■■■□□ 2.58
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms