RNA–Protein interactions for RNA: ENSMUST00000218879.1

Srp54b-202, Transcript of Signal recognition particle 54 kDa protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Srp54b, Length 3,642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Srp54b-202ENSMUST00000218879 Nos1Q9Z0J4 1429 aa12.84□□□□□ -0.35
Srp54b-202ENSMUST00000218879 Zscan22Q8BGS5 496 aa12.83□□□□□ -0.35
Srp54b-202ENSMUST00000218879 Matr3Q8K310 846 aaKnown RBP12.83□□□□□ -0.35
Srp54b-202ENSMUST00000218879 Tmed5Q9CXE7 229 aa12.83□□□□□ -0.35
Srp54b-202ENSMUST00000218879 Rab3gap2Q8BMG7 1366 aa12.83□□□□□ -0.35
Srp54b-202ENSMUST00000218879 Scn4aQ9ER60 1841 aa12.83□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Pdia2D3Z6P0 527 aa12.83□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Cdc37Q61081 379 aa12.83□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Osbpl5Q9ER64 874 aa12.83□□□□□ -0.36
Srp54b-202ENSMUST00000218879 NexmifQ5DTT1 1515 aa12.83□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Frat1P70339 274 aa12.83□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Tbc1d9Q3UYK3 1264 aa12.83□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Tmco3Q8BH01 678 aa12.83□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Wdr3Q8BHB4 942 aaKnown RBP12.83□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Mrps27Q8BK72 415 aaKnown RBP12.83□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Ccar2Q8VDP4 922 aaKnown RBP12.83□□□□□ -0.36
Srp54b-202ENSMUST00000218879 SyncQ9EPM5 470 aa12.83□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Ahdc1Q6PAL7 1594 aaKnown RBP12.83□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Plxnc1Q9QZC2 1574 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Zfp275G3X904 499 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Vwa3bJ9JI28 736 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Becn2P0DM65 447 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 B4galnt4Q766D5 1034 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Bank1Q80VH0 783 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Lrrc8aQ80WG5 810 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 ZgpatQ8VDM1 511 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 ByslO54825 436 aaKnown RBP12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Anks1aP59672 1150 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Emc10Q3TAS6 258 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Erc2Q6PH08 957 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 MyripQ8K3I4 856 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Map4P27546 1125 aaKnown RBP12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Ube2hP62257 183 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Klra7Q60654 280 aa12.82□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Wdr63B2RY71 923 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 RcvrnP34057 202 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 RalgdsQ03385 852 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Slc30a9Q5IRJ6 567 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Panx2Q6IMP4 677 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Acad11Q80XL6 779 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 PdcQ9QW08 244 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Zfy1P10925 782 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Usp25P57080 1055 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Exoc5Q3TPX4 708 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Ttll12Q3UDE2 639 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Tax1bp1Q3UKC1 814 aaKnown RBP12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Wdr93Q402B2 695 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Fnbp4Q6ZQ03 1031 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Srgap3Q812A2 1099 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Agap3Q8VHH5 910 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Gcc1Q9D4H2 778 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Slc8a1P70414 970 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Ccdc138Q0VF22 680 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Phactr4Q501J7 694 aa12.81□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Q8CEZ4 452 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Lzts2Q91YU6 671 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 CenppQ9CZ92 286 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Elf2Q9JHC9 593 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Ttll5Q8CHB8 1328 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Hmx1O70218 332 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 LifrP42703 1092 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Utp14aQ640M1 767 aaKnown RBP12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Znf513Q6PD29 541 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Gpr139Q80UC8 345 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Tpcn1Q9EQJ0 817 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Utp3Q9JI13 469 aaKnown RBP12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Ifit1bl1D3Z6F0 470 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Nek1P51954 1203 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Dnaaf2Q8BPI1 814 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Iws1Q8C1D8 766 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Msantd4Q91YU3 345 aa12.8□□□□□ -0.36
Srp54b-202ENSMUST00000218879 VirmaA2AIV2 1811 aaKnown RBP12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Chd2E9PZM4 1827 aaKnown RBP12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 C2cd2E9Q3C1 696 aa12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Arhgap5P97393 1501 aa12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Usp51B1AY15 661 aa12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 CidebO70303 219 aa12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Usp5P56399 858 aaKnown RBP12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 CgnP59242 1191 aa12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Ahcyl1Q80SW1 530 aa12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 St18Q80TY4 1045 aa12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Rimbp3Q3V0F0 1606 aa12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Cnbd1B1AWM0 430 aa12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 AU019823E9PUQ3 292 aa12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Tmem87aQ8BXN9 555 aa12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Akr1e2Q9DCT1 301 aa12.79□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Rsrc2A2RTL5 376 aaKnown RBP12.78□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Frmd3Q8BHD4 595 aa12.78□□□□□ -0.36
Srp54b-202ENSMUST00000218879 AnkarA2RT91 1465 aa12.78□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Mylk4Q5SUV5 386 aa12.78□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Trpm2Q91YD4 1506 aa12.78□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Tdrd9Q14BI7 1383 aa12.78□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Dhx8A2A4P0 1244 aaKnown RBP12.77□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Gm3415J3QMS8 315 aa12.77□□□□□ -0.36
Srp54b-202ENSMUST00000218879 MajinQ9D992 256 aa12.77□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Gdpd2Q9ESM6 539 aa12.77□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Actn2Q9JI91 894 aa12.77□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Yeats2Q3TUF7 1407 aa12.77□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Rtf1A2AQ19 715 aaKnown RBP12.77□□□□□ -0.36
Srp54b-202ENSMUST00000218879 Uspl1Q3ULM6 1089 aa12.77□□□□□ -0.36
Retrieved 100 of 22,080 RNA–protein pairs in 49.5 ms