RNA–Protein interactions for RNA: ENSMUST00000052965.6

Nipbl-201, Transcript of Nipped-B-like protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nipbl, Length 8,815 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nipbl-201ENSMUST00000052965 Homer1Q9Z2Y3 366 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Fancd2Q80V62 1450 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Ankrd44B2RXR6 993 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Ift88Q61371 824 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 SyncQ9EPM5 470 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Abca5Q8K448 1642 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Ubn2Q80WC1 1314 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Zswim4Q8C7B8 1101 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Mapkbp1Q6NS57 1503 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 EnahQ03173 802 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Mybpc2Q5XKE0 1136 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Suds3Q8BR65 328 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Cc2d1bQ8BRN9 848 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Prex2Q3LAC4 1598 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Sytl4Q9R0Q1 673 aa12.19□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Rrbp1Q99PL5 1605 aaKnown RBP12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Morc2aQ69ZX6 1030 aa12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Zscan29E9Q5B4 869 aa12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Dnajc21E9Q8D0 531 aa12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Nbr1P97432 988 aa12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Exoc6bA6H5Z3 810 aa12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Ppfia3P60469 1194 aa12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Esyt1Q3U7R1 1092 aaKnown RBP12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Rad50P70388 1312 aa12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Apol7aB2RT54 418 aa12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Nop53Q8BK35 484 aaKnown RBP12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Fkbp5Q64378 456 aa12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Smarca5Q91ZW3 1051 aaKnown RBP12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Hsf2bpQ9D4G2 338 aa12.18□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Zscan25B2RX31 543 aa12.17□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Kif5cP28738 956 aaKnown RBP12.17□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Wdr93Q402B2 695 aa12.17□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Gas8Q60779 478 aa12.17□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Gbp7Q91Z40 638 aa12.17□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Atp6v0a4Q920R6 833 aa12.17□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Stat1P42225 749 aa12.17□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Ncbp1Q3UYV9 790 aaKnown RBP12.17□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Ccdc91Q9D8L5 442 aa12.17□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Aox1O54754 1333 aa12.17□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Rad23bP54728 416 aa12.17□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Ccdc157Q5SPX1 718 aa12.17□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Lonp2Q9DBN5 852 aa12.17□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Gm21698A0A087WQP8 267 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Map3k9Q3U1V8 1077 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Bmp2kQ91Z96 1138 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Stmn2P55821 179 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Arhgap24Q8C4V1 747 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 4930572O03RikQ8C5Y0 211 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Pabpn1lQ5XFR0 273 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Dapk3O54784 448 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 ClgnP52194 611 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Fnbp4Q6ZQ03 1031 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 NapgQ9CWZ7 312 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Map3k13Q1HKZ5 959 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Tbc1d31Q6NXY1 996 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Krt222Q8CCX5 294 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 ZgpatQ8VDM1 511 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Kcnh5Q920E3 988 aa12.16□□□□□ -0.46
Nipbl-201ENSMUST00000052965 NpcdF8VQB8 469 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Lig3P97386 1015 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Bcar3Q9QZK2 820 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Cib2Q9Z309 187 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Zfpm1O35615 995 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Nucb1Q02819 459 aaKnown RBP12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Bicd1Q8BR07 835 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Shroom2A2ALU4 1481 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Api5O35841 504 aaKnown RBP12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Sycp2lA0A0M3U1B0 842 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Cbfa2t2O70374 594 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Tagap1P0CAX8 505 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Fgfr1opQ66JX5 399 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Mterf4Q8BVN4 346 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Ca8P28651 291 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 4921530L21RikQ9CQ47 274 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Mast1Q9R1L5 1570 aa12.15□□□□□ -0.46
Nipbl-201ENSMUST00000052965 Ppfia1B2RXQ2 1266 aa12.15□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Lrsam1Q80ZI6 727 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 EmbP21995 330 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Swap70Q6A028 585 aaKnown RBP12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Osbpl5Q9ER64 874 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Larp1bA0A0A6YXJ7 370 aaKnown RBP12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Q3UPC7 1272 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Wdr3Q8BHB4 942 aaKnown RBP12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Fmn2Q9JL04 1578 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Setd1aE9PYH6 1716 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 VimP20152 466 aaKnown RBP12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Ppp1r1bQ60829 194 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Tacc3Q9JJ11 631 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Kdm3bQ6ZPY7 1562 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Pdia3P27773 505 aaKnown RBP12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Ctdp1Q7TSG2 960 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Slc26a8Q8R0C3 999 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Themis2Q91YX0 663 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Ubxn1Q922Y1 297 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Trim34aQ99PP6 485 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Samd9lQ69Z37 1561 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Spa17Q62252 149 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Ttc19Q8CC21 365 aa12.14□□□□□ -0.47
Nipbl-201ENSMUST00000052965 TrdnE9Q9K5 693 aa12.13□□□□□ -0.47
Nipbl-201ENSMUST00000052965 Gadd45bP22339 160 aa12.13□□□□□ -0.47
Retrieved 100 of 22,080 RNA–protein pairs in 52.1 ms