RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 OR5B2Q96R09 309 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 PSD2Q9BQI7 771 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 PTDSS2Q9BVG9 487 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 PRDM14Q9GZV8 571 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 SEMA6AQ9H2E6 1030 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 TMEM185BQ9H7F4 350 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 KRCC1Q9NPI7 259 aaPredicted RBP11.07□□□□□ -0.64
LINC00339-213ENST00000642137 PAQR5Q9NXK6 330 aaPredicted RBP11.07□□□□□ -0.64
LINC00339-213ENST00000642137 TMEM5Q9Y2B1 443 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 MED12Q93074 2177 aa11.07□□□□□ -0.64
LINC00339-213ENST00000642137 A0A1W2PNR3 127 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 LIPT2A6NK58 231 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 FTCDNL1E5RQL4 147 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 G3V2T6 193 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 EIF1AYO14602 144 aaKnown RBP11.06□□□□□ -0.64
LINC00339-213ENST00000642137 TNFSF11O14788 317 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 DNPH1O43598 174 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 MT-ATP6P00846 226 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 BGLAPP02818 100 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 IFI30P13284 250 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 ANXA8P13928 327 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 FUT1P19526 365 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 IDUAP35475 653 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 RPS5P46782 204 aaKnown RBP11.06□□□□□ -0.64
LINC00339-213ENST00000642137 OMPP47874 163 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 DIO1P49895 249 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 RAC3P60763 192 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 SLC35A1P78382 337 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 LSM11P83369 360 aaKnown RBP eCLIP11.06□□□□□ -0.64
LINC00339-213ENST00000642137 HSF1Q00613 529 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 RBPJQ06330 500 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 LTBQ06643 244 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 MYBPHQ13203 477 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 SF3B4Q15427 424 aaKnown RBP eCLIP11.06□□□□□ -0.64
LINC00339-213ENST00000642137 GXYLT1Q4G148 440 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 HBMQ6B0K9 141 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 ZNF770Q6IQ21 691 aaPredicted RBP11.06□□□□□ -0.64
LINC00339-213ENST00000642137 GFRALQ6UXV0 394 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 FGD2Q7Z6J4 655 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 ZER1Q7Z7L7 766 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 ZDHHC13Q8IUH4 622 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 P3H2Q8IVL5 708 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 UBQLNLQ8IYU4 475 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 ST6GALNAC3Q8NDV1 305 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 OR10G2Q8NGC3 310 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 BPIFA2Q96DR5 249 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 BBC3Q96PG8 261 aaPredicted RBP11.06□□□□□ -0.64
LINC00339-213ENST00000642137 TAPBPLQ9BX59 468 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 OSBPL10Q9BXB5 764 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 COQ10BQ9H8M1 238 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 FKRPQ9H9S5 495 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 TIGARQ9NQ88 270 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 C20orf141Q9NUB4 165 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 PDP1Q9P0J1 537 aaPredicted RBP11.06□□□□□ -0.64
LINC00339-213ENST00000642137 MGAT4BQ9UQ53 548 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 ZNF835Q9Y2P0 537 aa11.06□□□□□ -0.64
LINC00339-213ENST00000642137 DSPP15924 2871 aaKnown RBP11.05□□□□□ -0.64
LINC00339-213ENST00000642137 ENO4A6NNW6 628 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 H0YC42 278 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 KPNA4O00629 521 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-213ENST00000642137 SEC14L5O43304 696 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 PIP5K1CO60331 668 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 EIF1BO60739 113 aaKnown RBP11.05□□□□□ -0.64
LINC00339-213ENST00000642137 OR7A10O76100 309 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 CH25HO95992 272 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 GASTP01350 101 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 HOXD4P09016 255 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-213ENST00000642137 ZNF23P17027 643 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 AGFG1P52594 562 aaKnown RBP11.05□□□□□ -0.64
LINC00339-213ENST00000642137 TPD52P55327 224 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-213ENST00000642137 OR2B6P58173 313 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 SRYQ05066 204 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 SLC34A1Q06495 639 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 OR7A5Q15622 319 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 SGCBQ16585 318 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 ZNF74Q16587 644 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 ANKDD1AQ495B1 522 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 PGBD2Q6P3X8 592 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 Q6ZPB1 254 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-213ENST00000642137 CHMP1BQ7LBR1 199 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 MAMDC2Q7Z304 686 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-213ENST00000642137 ICA1LQ8NDH6 482 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 OR10D3Q8NH80 312 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 FAM57AQ8TBR7 257 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 CPNE4Q96A23 557 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-213ENST00000642137 SLC25A36Q96CQ1 311 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 UCN2Q96RP3 112 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 NAA11Q9BSU3 229 aaPredicted RBP11.05□□□□□ -0.64
LINC00339-213ENST00000642137 C9orf16Q9BUW7 83 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 DGCR6LQ9BY27 220 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 RNPEPL1Q9HAU8 725 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 NANSQ9NR45 359 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 TNFRSF10DQ9UBN6 386 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 ZNF229Q9UJW7 825 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 CAMK2AQ9UQM7 478 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 CORINQ9Y5Q5 1042 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 PIEZO2Q9H5I5 2752 aa11.05□□□□□ -0.64
LINC00339-213ENST00000642137 B8ZZF3 427 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 KLF4O43474 513 aa11.04□□□□□ -0.64
LINC00339-213ENST00000642137 CXCL13O43927 109 aa11.04□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms