RNA–Protein interactions for RNA: ENST00000641523.1

CASC19-238, Transcript of cancer susceptibility 19, human

BASIC

Gene CASC19, Length 1,558 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CASC19-238	ENST00000641523	KLC3	Q6P597	504 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	ZNF782	Q6ZMW2	699 aa	Predicted RBP	5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	FAM219A	Q8IW50	185 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	CA13	Q8N1Q1	262 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	TMEM156	Q8N614	296 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	AMER2	Q8N7J2	671 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	SNX31	Q8N9S9	440 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	L3MBTL4	Q8NA19	623 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	SPERT	Q8NA61	448 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	IGFBPL1	Q8WX77	278 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	EXT2	Q93063	718 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	MS4A6E	Q96DS6	147 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	SMIM10	Q96HG1	83 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	NSMCE2	Q96MF7	247 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	BBS4	Q96RK4	519 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	RHBG	Q9H310	441 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	ANKZF1	Q9H8Y5	726 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	LYRM4	Q9HD34	91 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	KLHL1	Q9NR64	748 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	PRTFDC1	Q9NRG1	225 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	SDAD1	Q9NVU7	687 aa	Known RBP eCLIP	5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	MS4A12	Q9NXJ0	267 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	KLHL13	Q9P2N7	655 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	ATP6V1H	Q9UI12	483 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	EXO1	Q9UQ84	846 aa	Known RBP	5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	YARS2	Q9Y2Z4	477 aa	Known RBP	5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	FAM96B	Q9Y3D0	163 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	APC	P25054	2843 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	TEP1	Q99973	2627 aa	Known RBP	5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	SCN3A	Q9NY46	2000 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	CPAMD8	Q8IZJ3	1885 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	TRBV11-1	A0A0K0K1C0	115 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	5.67	□□□□□ -1.5
CASC19-238	ENST00000641523		A0A1W2PPM1	405 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	C5orf52	A6NGY3	159 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	CGB1	A6NKQ9	187 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	HNRNPCL2	B2RXH8	293 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	NPIPB11	E5RHQ5	1161 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	NPIPA5	E9PKD4	350 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	PRRG2	O14669	202 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	TFEC	O14948	347 aa	Predicted RBP	5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	RAD51C	O43502	376 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	SELENOF	O60613	162 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	CTNS	O60931	367 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	ZFAND5	O76080	213 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	SBK2	P0C263	348 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	RHOXF2B	P0C7M4	288 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	ABO	P16442	354 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	SSTR1	P30872	391 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	PHB	P35232	272 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	PTGER4	P35408	488 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	CDKN1A	P38936	164 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	GDF5	P43026	501 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	SSR4	P51571	173 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	PLA2G16	P53816	162 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	BTG2	P78543	158 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	STX4	Q12846	297 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	ZMYND11	Q15326	602 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	STK11	Q15831	433 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	FAM83E	Q2M2I3	478 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	ALG10	Q5BKT4	473 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	ALG10B	Q5I7T1	473 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	SPINK14	Q6IE38	97 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	METTL2B	Q6P1Q9	378 aa	Known RBP	5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	MED27	Q6P2C8	311 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	HSDL2	Q6YN16	418 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	ZNF66	Q6ZN08	573 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523		Q6ZPB1	254 aa	Predicted RBP	5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	FAM57B	Q71RH2	274 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	TBC1D26	Q86UD7	250 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	ZNF573	Q86YE8	665 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	SLC22A9	Q8IVM8	553 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	CYP4Z2P	Q8N1L4	340 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	BOLL	Q8N9W6	283 aa	Known RBP	5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	MORN4	Q8NDC4	146 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	OR5L2	Q8NGL0	311 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	OR10S1	Q8NGN2	331 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	OR8K3	Q8NH51	312 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	OR14A16	Q8NHC5	309 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	RHEBL1	Q8TAI7	183 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	UBTD2	Q8WUN7	234 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	EME1	Q96AY2	570 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	CMTM7	Q96FZ5	175 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	ART5	Q96L15	291 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	SIGLEC12	Q96PQ1	595 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	RHOXF2	Q9BQY4	288 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	TMEM79	Q9BSE2	394 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	SPNS1	Q9H2V7	528 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	KLHL31	Q9H511	634 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	NOL11	Q9H8H0	719 aa	Known RBP	5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	OPTC	Q9UBM4	332 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	COPS7A	Q9UBW8	275 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	IKZF3	Q9UKT9	509 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	NPIPA1	Q9UND3	350 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	ERVK-11	Q9UQG0	969 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	ACOT9	Q9Y305	439 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	DMRT1	Q9Y5R6	373 aa		5.67	□□□□□ -1.5
CASC19-238	ENST00000641523		V9GYY5	206 aa	Predicted RBP	5.67	□□□□□ -1.5
CASC19-238	ENST00000641523	DNAJC13	O75165	2243 aa		5.66	□□□□□ -1.5
CASC19-238	ENST00000641523	CACNA1C	Q13936	2221 aa		5.66	□□□□□ -1.5

Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms