RNA–Protein interactions for RNA: ENST00000640931.1

RTTN-223, Transcript of rotatin, human

TSL 5

Gene RTTN, Length 2,065 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
RTTN-223	ENST00000640931	NPBWR1	P48145	328 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	EVX1	P49640	407 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	CEBPG	P53567	150 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	HCCS	P53701	268 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	C17orf67	Q0P5P2	114 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	LCP2	Q13094	533 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	VEZF1	Q14119	521 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	GCNT6	Q5T4J0	391 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	KIAA1161	Q6NSJ0	714 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	CDPF1	Q6NVV7	123 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	TPRG1	Q6ZUI0	275 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	MOB3C	Q70IA8	216 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	TMUB2	Q71RG4	321 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	LINGO2	Q7L985	606 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	GOLGA7	Q7Z5G4	137 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	C1QL4	Q86Z23	238 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	NXPE1	Q8N323	547 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	OR56A4	Q8NGH8	313 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	RHEBL1	Q8TAI7	183 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	POP5	Q969H6	163 aa	Known RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	TCTN2	Q96GX1	697 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	SENP5	Q96HI0	755 aa	Predicted RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	PPM1M	Q96MI6	270 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	NKX2-4	Q9H2Z4	354 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	DPAGT1	Q9H3H5	408 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	POPDC3	Q9HBV1	291 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	EML4	Q9HC35	981 aa	Known RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	EXOSC3	Q9NQT5	275 aa	Known RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	RASL12	Q9NYN1	266 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	TRIOBP	Q9H2D6	2365 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	GBF1	Q92538	1859 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	TRBV5-4	A0A0C4DH59	114 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931		A6NIZ1	184 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	OR2AG2	A6NM03	316 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	SEC14L6	B5MCN3	397 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	PRR23D1	E9PI22	279 aa	Predicted RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931		K7ESM1	405 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	NR5A2	O00482	541 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	GNGT2	O14610	69 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	SPINT1	O43278	529 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	CYTIP	O60759	359 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	CST1	P01037	141 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	ESR1	P03372	595 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	ALDOB	P05062	364 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	UBB	P0CG47	229 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	UBC	P0CG48	685 aa	Known RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	PRR23D2	P0DMB1	279 aa	Predicted RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	ADCYAP1	P18509	176 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	GPX3	P22352	226 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	ITGB7	P26010	798 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	TEAD1	P28347	426 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	HSD11B1	P28845	292 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	OR2B8P	P59922	312 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	RAC3	P60763	192 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	RPS27A	P62979	156 aa	Known RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	UBA52	P62987	128 aa	Known RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	MRPL49	Q13405	166 aa	Known RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	GPR176	Q14439	515 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	ISX	Q2M1V0	245 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	ARSJ	Q5FYB0	599 aa	Predicted RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	ZNF468	Q5VIY5	522 aa	Predicted RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	ZDHHC20	Q5W0Z9	365 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	LEMD1	Q68G75	181 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	ZNF660	Q6AZW8	331 aa	Predicted RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	FAHD2B	Q6P2I3	314 aa	Predicted RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	TMEM104	Q8NE00	496 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	SLC25A46	Q96AG3	418 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	FAHD2A	Q96GK7	314 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	LCOR	Q96JN0	433 aa	Predicted RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	PITX2	Q99697	317 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	RHNO1	Q9BSD3	238 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	RPP25	Q9BUL9	199 aa	Known RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	CNPPD1	Q9BV87	410 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	RIOK2	Q9BVS4	552 aa	Known RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	SNHG12	Q9BXW3	62 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	CSTL1	Q9H114	145 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	TUBA4B	Q9H853	241 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	TMEM138	Q9NPI0	162 aa		7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	C19orf53	Q9UNZ5	99 aa	Predicted RBP	7.37	□□□□□ -1.23
RTTN-223	ENST00000640931	ATG2A	Q2TAZ0	1938 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	PLXNB3	Q9ULL4	1909 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	FFAR2	O15552	330 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	SLC25A17	O43808	307 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	KLK8	O60259	260 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	SUSD5	O60279	629 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	GKN3P	P0CG01	181 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	ADH5	P11766	374 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	HGF	P14210	728 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	NCK1	P16333	377 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	ZNF7	P17097	686 aa	Predicted RBP	7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	HRH2	P25021	359 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	APEX1	P27695	318 aa	Known RBP	7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	DNAJA1	P31689	397 aa	Known RBP	7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	DCT	P40126	519 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	CAPZB	P47756	277 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	SPINT3	P49223	89 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	CDH11	P55287	796 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	RAP2B	P61225	183 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	UFM1	P61960	85 aa		7.36	□□□□□ -1.23
RTTN-223	ENST00000640931	NPRL3	Q12980	569 aa		7.36	□□□□□ -1.23

Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms