RNA–Protein interactions for RNA: ENST00000638076.1

CLN6-224, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 1 (best)

Gene CLN6, Length 2,323 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-224ENST00000638076 LINC00854A0A1B0GVQ3 168 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 ICOSLGO75144 302 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 CSF3P09919 207 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 MST1P26927 711 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 PYCR1P32322 319 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 MTNR1BP49286 362 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 PRPS1P60891 318 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 SCN1BQ07699 218 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 PYDC2Q56P42 97 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 ARHGAP40Q5TG30 622 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 GDPD1Q8N9F7 314 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 CLDN23Q96B33 292 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 TXNDC15Q96J42 360 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 CCNL2Q96S94 520 aaPredicted RBP19.65■□□□□ 0.74
CLN6-224ENST00000638076 DUSP15Q9H1R2 295 aaPredicted RBP19.65■□□□□ 0.74
CLN6-224ENST00000638076 PPIL3Q9H2H8 161 aaKnown RBP19.65■□□□□ 0.74
CLN6-224ENST00000638076 SEMA5BQ9P283 1151 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 TP53BP1Q12888 1972 aaPredicted RBP19.65■□□□□ 0.74
CLN6-224ENST00000638076 BLOC1S5-TXNDC5H3BN57 136 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 IMPA2O14732 288 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 CD53P19397 219 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 NAA10P41227 235 aaPredicted RBP19.65■□□□□ 0.74
CLN6-224ENST00000638076 GRK6P43250 576 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 NR2C2APQ86WQ0 139 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 C9orf40Q8IXQ3 194 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 C10orf53Q8N6V4 93 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 NPEPL1Q8NDH3 523 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 MOSPD2Q8NHP6 518 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 ZPLD1Q8TCW7 415 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 ZNRF4Q8WWF5 429 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 RASD2Q96D21 266 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 CNN2Q99439 309 aaKnown RBP19.65■□□□□ 0.74
CLN6-224ENST00000638076 GRIP1Q9Y3R0 1128 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 NOX1Q9Y5S8 564 aa19.65■□□□□ 0.74
CLN6-224ENST00000638076 ARPC3O15145 178 aa19.64■□□□□ 0.74
CLN6-224ENST00000638076 CFL1P23528 166 aaKnown RBP19.64■□□□□ 0.74
CLN6-224ENST00000638076 ACVR1BP36896 505 aa19.64■□□□□ 0.74
CLN6-224ENST00000638076 EBPQ15125 230 aaKnown RBP19.64■□□□□ 0.74
CLN6-224ENST00000638076 PON3Q15166 354 aa19.64■□□□□ 0.74
CLN6-224ENST00000638076 CNIH2Q6PI25 160 aa19.64■□□□□ 0.74
CLN6-224ENST00000638076 PRSS42Q7Z5A4 293 aa19.64■□□□□ 0.74
CLN6-224ENST00000638076 POMGNT2Q8NAT1 580 aa19.64■□□□□ 0.74
CLN6-224ENST00000638076 KIAA1143Q96AT1 154 aaPredicted RBP19.64■□□□□ 0.74
CLN6-224ENST00000638076 KLHDC3Q9BQ90 382 aa19.64■□□□□ 0.74
CLN6-224ENST00000638076 NUDT22Q9BRQ3 303 aa19.64■□□□□ 0.74
CLN6-224ENST00000638076 TMEM43Q9BTV4 400 aa19.64■□□□□ 0.74
CLN6-224ENST00000638076 SEC16AO15027 2179 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 UNC13CQ8NB66 2214 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 A0A1B0GX78 115 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 OR6C68A6NDL8 312 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 SERPINI2O75830 405 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 SHC1P29353 583 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 RFX2P48378 723 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 NR0B1P51843 470 aaKnown RBP19.64■□□□□ 0.73
CLN6-224ENST00000638076 TPTEP56180 551 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 GGTLC2Q14390 218 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 ZNF74Q16587 644 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 TP53I3Q53FA7 332 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 FAM27D1Q5T7N8 215 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 LCN1P1Q5VSP4 162 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 MZT2AQ6P582 158 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 ZNF563Q8TA94 476 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 DAZLQ92904 295 aaKnown RBP19.64■□□□□ 0.73
CLN6-224ENST00000638076 ZNF501Q96CX3 271 aaPredicted RBP19.64■□□□□ 0.73
CLN6-224ENST00000638076 PGLYRP3Q96LB9 341 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 MOGAT1Q96PD6 335 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 NEDD4LQ96PU5 975 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 DDOQ99489 341 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 RTN4RQ9BZR6 473 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 NANSQ9NR45 359 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 FGF21Q9NSA1 209 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 MKL2Q9ULH7 1088 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 EML5Q05BV3 1969 aa19.64■□□□□ 0.73
CLN6-224ENST00000638076 MAGEB4O15481 346 aaPredicted RBP19.63■□□□□ 0.73
CLN6-224ENST00000638076 GMFGO60234 142 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 OR2T7P0C7T2 308 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 IL12BP29460 328 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 AQP2P41181 271 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 DAB2P98082 770 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 EGR4Q05215 589 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 LGALS3BPQ08380 585 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 TRAM1Q15629 374 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 HLA-DQA1Q5Y7H0 255 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 DMKNQ6E0U4 476 aaPredicted RBP19.63■□□□□ 0.73
CLN6-224ENST00000638076 WDR74Q6RFH5 385 aaPredicted RBP19.63■□□□□ 0.73
CLN6-224ENST00000638076 IL17RDQ8NFM7 739 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 OR2T27Q8NH04 317 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 ABHD4Q8TB40 342 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 GPX7Q96SL4 187 aaPredicted RBP19.63■□□□□ 0.73
CLN6-224ENST00000638076 VN1R1Q9GZP7 353 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 TRIOBPQ9H2D6 2365 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 SPI1P17947 270 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 CAPZA2P47755 286 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 DCAF7P61962 342 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 ZNF800Q2TB10 664 aaPredicted RBP eCLIP19.63■□□□□ 0.73
CLN6-224ENST00000638076 SLC35F2Q8IXU6 374 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 OR14A16Q8NHC5 309 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 MALT1Q9UDY8 824 aa19.63■□□□□ 0.73
CLN6-224ENST00000638076 IGF2P01344 180 aa19.62■□□□□ 0.73
CLN6-224ENST00000638076 APEX1P27695 318 aaKnown RBP19.62■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms