RNA–Protein interactions for RNA: ENST00000638016.1

PNKP-230, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 109 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-230ENST00000638016 ZNF385DQ9H6B1 395 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 BCL2L10Q9HD36 194 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 ARGLU1Q9NWB6 273 aaPredicted RBP15.64■□□□□ 0.09
PNKP-230ENST00000638016 EMC3Q9P0I2 261 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 TRAPPC4Q9Y296 219 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 FLVCR1Q9Y5Y0 555 aa15.64■□□□□ 0.09
PNKP-230ENST00000638016 TMEM247A6NEH6 219 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 DPRXA6NFQ7 191 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 LIPT2A6NK58 231 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 HS3ST1O14792 307 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 TPST1O60507 370 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 EDF1O60869 148 aaKnown RBP15.63■□□□□ 0.09
PNKP-230ENST00000638016 UQCRBP14927 111 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 CXCR1P25024 350 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 AQP1P29972 269 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 IDUAP35475 653 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 ATP4BP51164 291 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 SLC35A1P78382 337 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 SELPLGQ14242 412 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 OTUD3Q5T2D3 398 aaPredicted RBP15.63■□□□□ 0.09
PNKP-230ENST00000638016 FBXW9Q5XUX1 488 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 WBP2NLQ6ICG8 309 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 ADAM5Q6NVV9 412 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 CASP12Q6UXS9 341 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 DLEU7Q6UYE1 221 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 C20orf204Q6ZNR8 217 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 RETREG3Q86VR2 466 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 CIARTQ8N365 385 aaPredicted RBP15.63■□□□□ 0.09
PNKP-230ENST00000638016 ZNF385AQ96PM9 386 aaKnown RBP15.63■□□□□ 0.09
PNKP-230ENST00000638016 WFDC6Q9BQY6 131 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 CPPED1Q9BRF8 314 aaPredicted RBP15.63■□□□□ 0.09
PNKP-230ENST00000638016 ADPRHL2Q9NX46 363 aa15.63■□□□□ 0.09
PNKP-230ENST00000638016 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.63■□□□□ 0.09
PNKP-230ENST00000638016 PLCE1Q9P212 2302 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 TMEM229AB2RXF0 380 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 C5orf58C9J3I9 102 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 DNPH1O43598 174 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 ITGA5P08648 1049 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 HTR2AP28223 471 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 RIPPLY3P57055 190 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 COPZ1P61923 177 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 CDK6Q00534 326 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 BSPH1Q075Z2 132 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 FAPQ12884 760 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 SLC17A1Q14916 467 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 PAQR6Q6TCH4 344 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 P3H2Q8IVL5 708 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 OR52N5Q8NH56 324 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 HSD17B8Q92506 261 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 PIGTQ969N2 578 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 PIP5K1AQ99755 562 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 RAD21L1Q9H4I0 556 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 SLC7A10Q9NS82 523 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 THUMPD1Q9NXG2 353 aaKnown RBP15.62■□□□□ 0.09
PNKP-230ENST00000638016 SEC14L4Q9UDX3 406 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 ZNF232Q9UNY5 417 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 RNF115Q9Y4L5 304 aa15.62■□□□□ 0.09
PNKP-230ENST00000638016 A0A0G2JND7 137 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 A0A1W2PP18 115 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 MRPL33O75394 65 aaKnown RBP15.61■□□□□ 0.09
PNKP-230ENST00000638016 GGT1P19440 569 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 PTNP21246 168 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 FKBP2P26885 142 aaKnown RBP15.61■□□□□ 0.09
PNKP-230ENST00000638016 PTH2RP49190 550 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 P2RY4P51582 365 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 MTPNP58546 118 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 EGR4Q05215 589 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 LGALS3BPQ08380 585 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 SPOCK1Q08629 439 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 PPA1Q15181 289 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 ADRM1Q16186 407 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 TSPO2Q5TGU0 170 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 Q71RC1 249 aaPredicted RBP15.61■□□□□ 0.09
PNKP-230ENST00000638016 ZIC4Q8N9L1 334 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 Q96MF0 132 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 CACYBPQ9HB71 228 aaKnown RBP15.61■□□□□ 0.09
PNKP-230ENST00000638016 ZNF446Q9NWS9 450 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 IFT52Q9Y366 437 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 NF1P21359 2839 aa15.61■□□□□ 0.09
PNKP-230ENST00000638016 TRIM64A6NGJ6 449 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 TRIM64BA6NI03 449 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 OR5H1A6NKK0 313 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 CCT8L1PA6NM43 557 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 GPR171O14626 319 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 EIF1BO60739 113 aaKnown RBP15.6■□□□□ 0.09
PNKP-230ENST00000638016 NPIPB7O75200 414 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 GPIP06744 558 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 CD3EP07766 207 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 SOD3P08294 240 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 ETS2P15036 469 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 SCARB2Q14108 478 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 C1orf140Q5VVS0 124 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 PRAMEF8Q5VWM4 474 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 PRAMEF7Q5VXH5 474 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 SHEQ5VZ18 495 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 YTHDF3Q7Z739 585 aaKnown RBP15.6■□□□□ 0.09
PNKP-230ENST00000638016 DHDDSQ86SQ9 333 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 GPAT4Q86UL3 456 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 LRRC75A-AS1Q8N1F1 130 aa15.6■□□□□ 0.09
PNKP-230ENST00000638016 ZNF611Q8N823 705 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms