RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 PCDHGA9Q9Y5G4 932 aaKnown RBP18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 ENPP4Q9Y6X5 453 aa18.17■□□□□ 0.5
CACNA1A-257ENST00000638009 DUSP6Q16828 381 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 ENTHD1Q8IYW4 607 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 SLC35G3Q8N808 338 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 CLEC1AQ8NC01 280 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 RAB3CQ96E17 227 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 M0R3H8 397 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 CLIC3O95833 236 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 CYB5D2Q8WUJ1 264 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 TMEM98Q9Y2Y6 226 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 CDC123O75794 336 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 RPL7L1Q6DKI1 246 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 DCAF4L2Q8NA75 395 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 NPRL2Q8WTW4 380 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 V9GYS6 101 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 AHSGP02765 367 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 SRYQ05066 204 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 MLLT11Q13015 90 aaPredicted RBP18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 TAF9BQ9HBM6 251 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 FBRSL1Q9HCM7 1045 aaKnown RBP18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 ZNF536O15090 1300 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 TMEM233B4DJY2 109 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 FZD7O75084 574 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 DGAT2L6Q6ZPD8 337 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 CTDSP1Q9GZU7 261 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 GPRIN2O60269 458 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 OR13C4Q8NGS5 318 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 OSGIN2Q9Y236 505 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 LALBAP00709 142 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 P2RY14Q15391 338 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 C5orf46Q6UWT4 87 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 ZNF597Q96LX8 424 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 LAMP3Q9UQV4 416 aa18.16■□□□□ 0.5
CACNA1A-257ENST00000638009 ANHXE9PGG2 379 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 HCCSP53701 268 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 ERVFC1P60507 584 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 TBPL1P62380 186 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 ZNF322Q6U7Q0 402 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 GGHQ92820 318 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 NKX6-2Q9C056 277 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 GNB4Q9HAV0 340 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 TYRP1P17643 537 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 HLA-DMAP28067 261 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 LAPTM4AQ15012 233 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 GNG12Q9UBI6 72 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 SUSD1Q6UWL2 747 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 RIMS4Q9H426 269 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 EGLN3Q9H6Z9 239 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 KCNQ2O43526 872 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 CHRM4P08173 479 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 MPC1LP0DKB6 136 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 WDR4P57081 412 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 GALNT1Q10472 559 aaPredicted RBP18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 EARS2Q5JPH6 523 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 OTOP2Q7RTS6 562 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 PHF6Q8IWS0 365 aaKnown RBP eCLIP18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 BPIFB2Q8N4F0 458 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 BPIFCQ8NFQ6 507 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 MMP28Q9H239 520 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 RALYQ9UKM9 306 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 TGFB1I1O43294 461 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 CNIH1O95406 144 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 SLC11A1P49279 550 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 OR2M3Q8NG83 312 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 OR5H6Q8NGV6 325 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 APH1BQ8WW43 257 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 NMES1Q9C002 83 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 ADRB1P08588 477 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 FOXJ1Q92949 421 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 ARNT2Q9HBZ2 717 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 OBP2BQ9NPH6 170 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 THSD1Q9NS62 852 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 PHOX2AO14813 284 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 PFKMP08237 780 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 SERPINA2P20848 420 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 GDI1P31150 447 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 CNR2P34972 360 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 EMP2P54851 167 aa18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 NDRG1Q92597 394 aaKnown RBP18.15■□□□□ 0.5
CACNA1A-257ENST00000638009 DIP2BQ9P265 1576 aa18.14■□□□□ 0.5
CACNA1A-257ENST00000638009 POLR2AP24928 1970 aaKnown RBP18.14■□□□□ 0.5
CACNA1A-257ENST00000638009 YJEFN3A6XGL0 299 aa18.14■□□□□ 0.5
CACNA1A-257ENST00000638009 H3BMQ9 156 aa18.14■□□□□ 0.5
CACNA1A-257ENST00000638009 SYN1P17600 705 aa18.14■□□□□ 0.5
CACNA1A-257ENST00000638009 VIPR2P41587 438 aa18.14■□□□□ 0.5
CACNA1A-257ENST00000638009 OR13C8Q8NGS7 320 aa18.14■□□□□ 0.5
CACNA1A-257ENST00000638009 BARX1Q9HBU1 254 aaPredicted RBP18.14■□□□□ 0.5
CACNA1A-257ENST00000638009 PMS2P2O95744 297 aa18.14■□□□□ 0.49
CACNA1A-257ENST00000638009 ABHD6Q9BV23 337 aa18.14■□□□□ 0.49
CACNA1A-257ENST00000638009 GALNT9Q9HCQ5 603 aa18.14■□□□□ 0.49
CACNA1A-257ENST00000638009 KCNG2Q9UJ96 466 aa18.14■□□□□ 0.49
CACNA1A-257ENST00000638009 TCRBV7S2A1N4TA0A589 114 aa18.14■□□□□ 0.49
CACNA1A-257ENST00000638009 RNASEK-C17orf49H0YIS7 233 aa18.14■□□□□ 0.49
CACNA1A-257ENST00000638009 MEF2AQ02078 507 aaPredicted RBP18.14■□□□□ 0.49
CACNA1A-257ENST00000638009 PAFAH1B3Q15102 231 aaKnown RBP18.14■□□□□ 0.49
CACNA1A-257ENST00000638009 WDR88Q6ZMY6 472 aa18.14■□□□□ 0.49
CACNA1A-257ENST00000638009 ILDR1Q86SU0 546 aaPredicted RBP18.14■□□□□ 0.49
CACNA1A-257ENST00000638009 FRMD1Q8N878 549 aa18.14■□□□□ 0.49
CACNA1A-257ENST00000638009 MRPL38Q96DV4 380 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms