RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 CPSF4O95639 269 aaKnown RBP6.98□□□□□ -1.29
PNKP-229ENST00000637897 RAF1P04049 648 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 GSNP06396 782 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 CD99P14209 185 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 ENPP1P22413 925 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 AGTR1P30556 359 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 LCN1P31025 176 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 MVDP53602 400 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 ATP12AP54707 1039 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 PSMD4P55036 377 aaKnown RBP6.98□□□□□ -1.29
PNKP-229ENST00000637897 SKP2Q13309 424 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 TP53BP2Q13625 1128 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 VEZF1Q14119 521 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 TSC22D1Q15714 1073 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 ZNF141Q15928 474 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 ZNF239Q16600 458 aaKnown RBP6.98□□□□□ -1.29
PNKP-229ENST00000637897 GTDC1Q4AE62 458 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 PDZK1Q5T2W1 519 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 SAXO2Q658L1 398 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 TYW3Q6IPR3 259 aaKnown RBP6.98□□□□□ -1.29
PNKP-229ENST00000637897 P4HA3Q7Z4N8 544 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 GABRG1Q8N1C3 465 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 GALNT4Q8N4A0 578 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 ZNF527Q8NB42 609 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 FAM71CQ8NEG0 241 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 OR4A15Q8NGL6 344 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 LILRB1Q8NHL6 650 aaPredicted RBP6.98□□□□□ -1.29
PNKP-229ENST00000637897 PHOSPHO1Q8TCT1 267 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 MIPOL1Q8TD10 442 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 SFXN5Q8TD22 340 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 RNF128Q8TEB7 428 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 OSTF1Q92882 214 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 RAB8BQ92930 207 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 ZBTB8AQ96BR9 441 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 AURKBQ96GD4 344 aaPredicted RBP6.98□□□□□ -1.29
PNKP-229ENST00000637897 KLHL15Q96M94 604 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 CIB1Q99828 191 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 CHID1Q9BWS9 393 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 ZNF350Q9GZX5 532 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 QRSL1Q9H0R6 528 aaKnown RBP6.98□□□□□ -1.29
PNKP-229ENST00000637897 SEMA6AQ9H2E6 1030 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 TPT1P8Q9HAU6 139 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 DCAF13Q9NV06 445 aaKnown RBP6.98□□□□□ -1.29
PNKP-229ENST00000637897 MRTO4Q9UKD2 239 aaKnown RBP6.98□□□□□ -1.29
PNKP-229ENST00000637897 USP22Q9UPT9 525 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 SAMD4AQ9UPU9 718 aaKnown RBP6.98□□□□□ -1.29
PNKP-229ENST00000637897 ALPK2Q86TB3 2170 aa6.98□□□□□ -1.29
PNKP-229ENST00000637897 NSD1Q96L73 2696 aaPredicted RBP6.97□□□□□ -1.29
PNKP-229ENST00000637897 IGHV3-15A0A0B4J1V0 119 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 A0A1W2PNR3 127 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 CLOCKO15516 846 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 TPST1O60507 370 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 RAMP1O60894 148 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 PRSS23O95084 383 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 KRT75O95678 551 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 LYNP07948 512 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 OR12D1P0DN82 309 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 POU2F1P14859 743 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 MATN1P21941 496 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 DNASE1P24855 282 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 SFTPDP35247 375 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 P2RX1P51575 399 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 CHN2P52757 468 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 FADDQ13158 208 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 PDK3Q15120 406 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 VMACQ2NL98 169 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 ARHGAP11BQ3KRB8 267 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 OR2A2Q6IF42 318 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 TMEM154Q6P9G4 183 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 TFAP2EQ6VUC0 442 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 FRRS1Q6ZNA5 592 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 ESPNLQ6ZVH7 1005 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 TUSC5Q8IXB3 177 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 OR56A1Q8NGH5 318 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 OR6K3Q8NGY3 331 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 ADAMTS15Q8TE58 950 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 ZFP90Q8TF47 636 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 SLC47A1Q96FL8 570 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 ZC3HAV1LQ96H79 300 aaKnown RBP6.97□□□□□ -1.29
PNKP-229ENST00000637897 GMPPAQ96IJ6 420 aaPredicted RBP6.97□□□□□ -1.29
PNKP-229ENST00000637897 SEPHS2Q99611 448 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 TMEM204Q9BSN7 226 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 SAP130Q9H0E3 1048 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 OR51I1Q9H343 314 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 ELOVL5Q9NYP7 299 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 DNAJB9Q9UBS3 223 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 RPS6KA6Q9UK32 745 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 MKLN1Q9UL63 735 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 PROCRQ9UNN8 238 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 CHST2Q9Y4C5 530 aa6.97□□□□□ -1.29
PNKP-229ENST00000637897 PLCE1Q9P212 2302 aa6.96□□□□□ -1.29
PNKP-229ENST00000637897 RNF103-CHMP3A0A140T963 221 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP6.96□□□□□ -1.3
PNKP-229ENST00000637897 SERINC4A6NH21 518 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 SAC3D1A6NKF1 404 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 C16orf97H3BN30 126 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 HMGN4O00479 90 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 SCDO00767 359 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 SOCS2O14508 198 aa6.96□□□□□ -1.3
PNKP-229ENST00000637897 SMAD9O15198 467 aaKnown RBP6.96□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms