RNA–Protein interactions for RNA: ENST00000637053.1

VIM-210, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 508 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-210ENST00000637053 STUMQ69YW2 141 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 TMEM200BQ69YZ2 307 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 AADACL2Q6P093 401 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 DHRS13Q6UX07 377 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ZNF836Q6ZNA1 936 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 Q6ZRM9 215 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 SLC16A14Q7RTX9 510 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 APTXQ7Z2E3 356 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 NUFIP2Q7Z417 695 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 TMEM144Q7Z5S9 345 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 UNC93AQ86WB7 457 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 GPBP1Q86WP2 473 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 APRG1Q8IVJ8 170 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 BCL6BQ8N143 479 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 MTURNQ8N3F0 131 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 STPG2Q8N412 459 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 HSD17B11Q8NBQ5 300 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 OR5AU1Q8NGC0 362 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 OR4K2Q8NGD2 314 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 OR4A4PQ8NGN8 299 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 OR9A2Q8NGT5 310 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 OR6N2Q8NGY6 317 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 OR2AJ1Q8NGZ0 328 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 OR1F12Q8NHA8 337 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 NR4A3Q92570 626 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 TFGQ92734 400 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 ABTB1Q969K4 478 aaPredicted RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 ISOC2Q96AB3 205 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 CREB3L1Q96BA8 519 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 YIPF6Q96EC8 236 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 WDR34Q96EX3 536 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 SGK494Q96LW2 274 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 TMEM56Q96MV1 263 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 FYTTD1Q96QD9 318 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 MICU1Q9BPX6 476 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 AIF1LQ9BQI0 150 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 NDUFAF3Q9BU61 184 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 MLST8Q9BVC4 326 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ALG8Q9BVK2 526 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 VN1R3Q9BXE9 311 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 CADM1Q9BY67 442 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 MRPS26Q9BYN8 205 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 BARHL1Q9BZE3 327 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 LAT2Q9GZY6 243 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ING2Q9H160 280 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 MMP28Q9H239 520 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 SYT4Q9H2B2 425 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 GSTO2Q9H4Y5 243 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 CDCP1Q9H5V8 836 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 KAT8Q9H7Z6 458 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 UGT1A7Q9HAW7 530 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 UGT1A8Q9HAW9 530 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 RHOFQ9HBH0 211 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 EML4Q9HC35 981 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 Q9N2K0 584 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 INPP5EQ9NRR6 644 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 RGS18Q9NS28 235 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ECHDC1Q9NTX5 307 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 FGFR1OP2Q9NVK5 253 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 TREM2Q9NZC2 230 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 MRTO4Q9UKD2 239 aaKnown RBP2.71□□□□□ -1.98
VIM-210ENST00000637053 RAB26Q9ULW5 256 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 DHDHQ9UQ10 334 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 TP53TG5Q9Y2B4 290 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 POLDIP2Q9Y2S7 368 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 SLC6A5Q9Y345 797 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 TIMM10BQ9Y5J6 103 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 OR51B4Q9Y5P0 310 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 TMEM56-RWDD3S4R434 201 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 V9GYY9 64 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 NISCHQ9Y2I1 1504 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ARHGEF10O15013 1369 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 PLEKHG1Q9ULL1 1385 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 ZNF518AQ6AHZ1 1483 aa2.71□□□□□ -1.98
VIM-210ENST00000637053 USP42Q9H9J4 1324 aaKnown RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 A0A1W2PPV9 198 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 VPS37CA5D8V6 355 aaPredicted RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 PSMB11A5LHX3 300 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 CDHR4A6H8M9 788 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 CXorf49A8MYA2 514 aaPredicted RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 SULT1C2O00338 296 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 IMPA2O14732 288 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 CHEK1O14757 476 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 AZIN1O14977 448 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 XRCC3O43542 346 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 SCO2O43819 266 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 LDB3O75112 727 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 CLDN9O95484 217 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 IFNGP01579 166 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 IGHV2-70P01814 119 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 ORM1P02763 201 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 IFNW1P05000 195 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 C2P06681 752 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 KLK1P06870 262 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 CT62P0C5K7 136 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 SMIM6P0DI80 62 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 ZNF43P17038 809 aa2.7□□□□□ -1.98
VIM-210ENST00000637053 HOXB9P17482 250 aaPredicted RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 CSNK2A2P19784 350 aaPredicted RBP2.7□□□□□ -1.98
VIM-210ENST00000637053 RAB3AP20336 220 aa2.7□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms