RNA–Protein interactions for RNA: ENST00000636876.1

CLN6-216, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 655 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-216ENST00000636876 CALHM2Q9HA72 323 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 NMNAT1Q9HAN9 279 aaPredicted RBP14.35□□□□□ -0.11
CLN6-216ENST00000636876 TIGARQ9NQ88 270 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 CLCF1Q9UBD9 225 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 TRAPPC4Q9Y296 219 aa14.35□□□□□ -0.11
CLN6-216ENST00000636876 TRAV36DV7A0A075B6V5 113 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 A0A1W2PRQ8 180 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 ERICH4A6NGS2 130 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 CD8B2A6NJW9 211 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 KDM4EB2RXH2 506 aaPredicted RBP14.34□□□□□ -0.11
CLN6-216ENST00000636876 E9PLN8 166 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 SULT2B1O00204 365 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 SYNGR4O95473 234 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 IMPDH2P12268 514 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 PTNP21246 168 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 RAC3P60763 192 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 CSNK2A1P68400 391 aaPredicted RBP14.34□□□□□ -0.11
CLN6-216ENST00000636876 FOXD4Q12950 439 aaPredicted RBP14.34□□□□□ -0.11
CLN6-216ENST00000636876 DGCR6Q14129 220 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 KPNB1Q14974 876 aaKnown RBP14.34□□□□□ -0.11
CLN6-216ENST00000636876 SGCBQ16585 318 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 MYO7BQ6PIF6 2116 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 RPTNQ6XPR3 784 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 B3GNT6Q6ZMB0 384 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 RPRMLQ8N4K4 120 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 PAPD5Q8NDF8 572 aaKnown RBP14.34□□□□□ -0.11
CLN6-216ENST00000636876 TMEM255BQ8WV15 326 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 TMEM239Q8WW34 195 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 KTI12Q96EK9 354 aaPredicted RBP14.34□□□□□ -0.11
CLN6-216ENST00000636876 DNAJA3Q96EY1 480 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 HS6ST2Q96MM7 605 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 EPYCQ99645 322 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 VKORC1Q9BQB6 163 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 PTDSS2Q9BVG9 487 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 CHID1Q9BWS9 393 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 SLC19A3Q9BZV2 496 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 CCM2LQ9NUG4 571 aaPredicted RBP14.34□□□□□ -0.11
CLN6-216ENST00000636876 ZNF175Q9Y473 711 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 TESMINQ9Y4I5 508 aa14.34□□□□□ -0.11
CLN6-216ENST00000636876 PHF3Q92576 2039 aaKnown RBP14.33□□□□□ -0.12
CLN6-216ENST00000636876 LIPT2A6NK58 231 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 DNPH1O43598 174 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 UGT2B15P54855 530 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 OR2B6P58173 313 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 SMIM11AP58511 58 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 ACTR3P61158 418 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 SPIBQ01892 262 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 PON3Q15166 354 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 ZNF239Q16600 458 aaKnown RBP14.33□□□□□ -0.12
CLN6-216ENST00000636876 PLXDC2Q6UX71 529 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 OR6S1Q8NH40 331 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 MFSD8Q8NHS3 518 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 FNDC9Q8TBE3 224 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 WNT2BQ93097 391 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 TAAR8Q969N4 342 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 CPNE4Q96A23 557 aaPredicted RBP14.33□□□□□ -0.12
CLN6-216ENST00000636876 SLCO4A1Q96BD0 722 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 DMRTA2Q96SC8 542 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 MCTS1Q9ULC4 181 aaKnown RBP14.33□□□□□ -0.12
CLN6-216ENST00000636876 MEMO1Q9Y316 297 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 LRRK2Q5S007 2527 aa14.33□□□□□ -0.12
CLN6-216ENST00000636876 PCNX1Q96RV3 2341 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 DIDO1Q9BTC0 2240 aaKnown RBP14.32□□□□□ -0.12
CLN6-216ENST00000636876 A0A1B0GUH1 482 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 SLC22A20A6NK97 555 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 FTCDNL1E5RQL4 147 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 CCL21O00585 134 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 OR2T1O43869 369 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 FZD7O75084 574 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 FKBP6O75344 327 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 GADD45GO95257 159 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 FPR1P21462 350 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 RRM2P31350 389 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 RPS5P46782 204 aaKnown RBP14.32□□□□□ -0.12
CLN6-216ENST00000636876 AGFG1P52594 562 aaKnown RBP14.32□□□□□ -0.12
CLN6-216ENST00000636876 SLC35A1P78382 337 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 OR7A5Q15622 319 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 C4orf17Q53FE4 359 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 FGD3Q5JSP0 725 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 FAM69AQ5T7M9 428 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 SEM1Q6ZVN7 128 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 MARVELD2Q8N4S9 558 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 ACOT11Q8WXI4 607 aaPredicted RBP14.32□□□□□ -0.12
CLN6-216ENST00000636876 ZHX1-C8orf76Q96EF9 292 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 DUS3LQ96G46 650 aaKnown RBP14.32□□□□□ -0.12
CLN6-216ENST00000636876 TTYH2Q9BSA4 534 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 FUZQ9BT04 418 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 TAPBPLQ9BX59 468 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 DENND2DQ9H6A0 471 aaPredicted RBP14.32□□□□□ -0.12
CLN6-216ENST00000636876 YY1AP1Q9H869 796 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 MEPEQ9NQ76 525 aaPredicted RBP14.32□□□□□ -0.12
CLN6-216ENST00000636876 MED31Q9Y3C7 131 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 ARHGAP21Q5T5U3 1957 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 KIAA1549Q9HCM3 1950 aa14.32□□□□□ -0.12
CLN6-216ENST00000636876 A0A087WUU8 490 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 TRBV4-1A0A0J9YWV2 114 aa14.31□□□□□ -0.12
CLN6-216ENST00000636876 MBD3L4A6NDZ8 208 aaPredicted RBP14.31□□□□□ -0.12
CLN6-216ENST00000636876 MBD3L3A6NE82 208 aaPredicted RBP14.31□□□□□ -0.12
CLN6-216ENST00000636876 MBD3L5A6NJ08 208 aaPredicted RBP14.31□□□□□ -0.12
CLN6-216ENST00000636876 ANKRD65E5RJM6 399 aa14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms