RNA–Protein interactions for RNA: ENST00000635754.1

CLN6-211, Transcript of CLN6, transmembrane ER protein, humanhuman

Gene CLN6, Length 1,441 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-211ENST00000635754 HECTD1Q9ULT8 2610 aa13.84□□□□□ -0.19
CLN6-211ENST00000635754 TRAPPC13A5PLN9 417 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 EEF1E1-BLOC1S5C9J1V9 151 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 SMAD9O15198 467 aaKnown RBP13.83□□□□□ -0.2
CLN6-211ENST00000635754 EEF1E1O43324 174 aaKnown RBP13.83□□□□□ -0.2
CLN6-211ENST00000635754 TNFSF13O75888 250 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 PRKD3O94806 890 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 AHSA1O95433 338 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 GPIP06744 558 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 OR1E2P47887 323 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 CDH12P55289 794 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 CTBP2P56545 445 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 SIRPAP78324 504 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 SLC35A1P78382 337 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 FXNQ16595 210 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 C1orf140Q5VVS0 124 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 C5orf46Q6UWT4 87 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 DEF8Q6ZN54 512 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 FAM214BQ7L5A3 538 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 ABHD3Q8WU67 409 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 TAPBPLQ9BX59 468 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 PIGMQ9H3S5 423 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 KLHL9Q9P2J3 617 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 PRPF19Q9UMS4 504 aaKnown RBP13.83□□□□□ -0.2
CLN6-211ENST00000635754 SAMD4AQ9UPU9 718 aaKnown RBP13.83□□□□□ -0.2
CLN6-211ENST00000635754 EMC9Q9Y3B6 208 aa13.83□□□□□ -0.2
CLN6-211ENST00000635754 A0A087WUJ7 227 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 CHP2O43745 196 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 EIF1BO60739 113 aaKnown RBP13.82□□□□□ -0.2
CLN6-211ENST00000635754 SS18L1O75177 396 aaPredicted RBP13.82□□□□□ -0.2
CLN6-211ENST00000635754 NPIPB7O75200 414 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 IFNW1P05000 195 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 IMPDH2P12268 514 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 FPR1P21462 350 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 ASCL1P50553 236 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 CEACAM7Q14002 265 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 GUSBP1Q15486 140 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 IFI44LQ53G44 452 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 VWA1Q6PCB0 445 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 FKBP9P1Q75LS8 142 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 VTCN1Q7Z7D3 282 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 LSRQ86X29 649 aaPredicted RBP13.82□□□□□ -0.2
CLN6-211ENST00000635754 GEMIN6Q8WXD5 167 aaKnown RBP13.82□□□□□ -0.2
CLN6-211ENST00000635754 LRRC46Q96FV0 321 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 HSH2DQ96JZ2 352 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 TACO1Q9BSH4 297 aaKnown RBP13.82□□□□□ -0.2
CLN6-211ENST00000635754 POLR2J2Q9GZM3 115 aaKnown RBP13.82□□□□□ -0.2
CLN6-211ENST00000635754 POLR2J3Q9H1A7 115 aaKnown RBP13.82□□□□□ -0.2
CLN6-211ENST00000635754 GORASP2Q9H8Y8 452 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 GP6Q9HCN6 339 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 CHST11Q9NPF2 352 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 TAS2R1Q9NYW7 299 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 SLC7A7Q9UM01 511 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 CLEC4AQ9UMR7 237 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 SNX13Q9Y5W8 968 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 HCFC1P51610 2035 aa13.82□□□□□ -0.2
CLN6-211ENST00000635754 LIPT2A6NK58 231 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 ARPC2O15144 300 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 CYTIPO60759 359 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 SMNDC1O75940 238 aaKnown RBP eCLIP13.81□□□□□ -0.2
CLN6-211ENST00000635754 MSX2P35548 267 aaPredicted RBP13.81□□□□□ -0.2
CLN6-211ENST00000635754 KIR2DL2P43627 348 aaPredicted RBP13.81□□□□□ -0.2
CLN6-211ENST00000635754 RPS5P46782 204 aaKnown RBP13.81□□□□□ -0.2
CLN6-211ENST00000635754 TAS2R41P59536 307 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 EGR4Q05215 589 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 RASGEF1BQ0VAM2 473 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 OR7A5Q15622 319 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 OR6K3Q8NGY3 331 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 PIGXQ8TBF5 258 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 EPYCQ99645 322 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 NAA11Q9BSU3 229 aaPredicted RBP13.81□□□□□ -0.2
CLN6-211ENST00000635754 DCAF13Q9NV06 445 aaKnown RBP13.81□□□□□ -0.2
CLN6-211ENST00000635754 KLHL13Q9P2N7 655 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 ASH1LQ9NR48 2969 aaKnown RBP13.81□□□□□ -0.2
CLN6-211ENST00000635754 OR2T1O43869 369 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 KLK2P20151 261 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 GTF2E2P29084 291 aaKnown RBP13.81□□□□□ -0.2
CLN6-211ENST00000635754 AGTR1P30556 359 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 IFNA8P32881 189 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 TFF3Q07654 80 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 DNAL1Q4LDG9 190 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 TMEM201Q5SNT2 666 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 ABLIM2Q6H8Q1 611 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 PAQR6Q6TCH4 344 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 MFSD8Q8NHS3 518 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 STARD4Q96DR4 205 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 KTI12Q96EK9 354 aaPredicted RBP13.81□□□□□ -0.2
CLN6-211ENST00000635754 SLC41A3Q96GZ6 507 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 MPP4Q96JB8 637 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 NSMCE2Q96MF7 247 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 PSD2Q9BQI7 771 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 TMEM43Q9BTV4 400 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 JKAMPQ9P055 326 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 PROCRQ9UNN8 238 aa13.81□□□□□ -0.2
CLN6-211ENST00000635754 IGKV1D-42A0A075B6H8 117 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 TRAV36DV7A0A075B6V5 113 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 MSTNO14793 375 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 GYG2O15488 501 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 OR5F1O95221 314 aa13.8□□□□□ -0.2
CLN6-211ENST00000635754 YES1P07947 543 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms