RNA–Protein interactions for RNA: ENST00000631321.1

LINC00540-203, long intergenic non-protein coding RNA 540, humanhuman

TSL 2 BASIC

Gene LINC00540, Length 2,412 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00540-203ENST00000631321 CLPPQ16740 277 aaPredicted RBP11.71□□□□□ -0.54
LINC00540-203ENST00000631321 PRTGQ2VWP7 1150 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 SIAH3Q8IW03 269 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 SFTPA2Q8IWL1 248 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 CADM2Q8N3J6 435 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 LRRC17Q8N6Y2 441 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 RCBTB1Q8NDN9 531 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 OR13H1Q8NG92 308 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 OR7G1Q8NGA0 311 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 ADAMTS14Q8WXS8 1223 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 RIT1Q92963 219 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 MRPL48Q96GC5 212 aaKnown RBP11.71□□□□□ -0.54
LINC00540-203ENST00000631321 NECTIN4Q96NY8 510 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 GPX7Q96SL4 187 aaPredicted RBP11.71□□□□□ -0.54
LINC00540-203ENST00000631321 G6PC3Q9BUM1 346 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 SEMA6CQ9H3T2 930 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 LRRN3Q9H3W5 708 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 CAPN10Q9HC96 672 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 FAM60AQ9NP50 221 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 POMT2Q9UKY4 750 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 HSPB11Q9Y547 144 aa11.71□□□□□ -0.54
LINC00540-203ENST00000631321 PCDHGA9Q9Y5G4 932 aaKnown RBP11.71□□□□□ -0.54
LINC00540-203ENST00000631321 BLACEA4D250 179 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 MAGEB4O15481 346 aaPredicted RBP11.7□□□□□ -0.54
LINC00540-203ENST00000631321 FABP7O15540 132 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 TMEM127O75204 238 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 CD3GP09693 182 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 PBX2P40425 430 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 RABIFP47224 123 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 RPS4XP62701 263 aaKnown RBP11.7□□□□□ -0.54
LINC00540-203ENST00000631321 DYRK1AQ13627 763 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 KLF9Q13886 244 aaPredicted RBP11.7□□□□□ -0.54
LINC00540-203ENST00000631321 ZNF782Q6ZMW2 699 aaPredicted RBP11.7□□□□□ -0.54
LINC00540-203ENST00000631321 OOSP2Q86WS3 158 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 SLC22A18ASQ8N1D0 253 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 SNX33Q8WV41 574 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 SNAPC3Q92966 411 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 SLC19A3Q9BZV2 496 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 S1PR5Q9H228 398 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 TCEAL2Q9H3H9 227 aaPredicted RBP11.7□□□□□ -0.54
LINC00540-203ENST00000631321 BRD7Q9NPI1 651 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 SLCO1C1Q9NYB5 712 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 PTTG3PQ9NZH4 202 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 COPS3Q9UNS2 423 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 DTX4Q9Y2E6 619 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 RNF215Q9Y6U7 377 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 A0A0B4J203 849 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 TRBV2A0A0J9YWF9 115 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 HRKO00198 91 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 CTNSO60931 367 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 OR7A10O76100 309 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 IGF2P01344 180 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 CTSBP07858 339 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 RNH1P13489 461 aaKnown RBP11.7□□□□□ -0.54
LINC00540-203ENST00000631321 ST6GAL1P15907 406 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 TYRP1P17643 537 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 SPI1P17947 270 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 EDNRAP25101 427 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 NAA10P41227 235 aaPredicted RBP11.7□□□□□ -0.54
LINC00540-203ENST00000631321 UBE2NLQ5JXB2 153 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 TMEM92Q6UXU6 159 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 SYT9Q86SS6 491 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 BMPERQ8N8U9 685 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 OR11H7Q8NGC8 314 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 OR51Q1Q8NH59 317 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 SMIM4Q8WVI0 70 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 ZNRF4Q8WWF5 429 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 SPACA7Q96KW9 195 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 CCNL2Q96S94 520 aaPredicted RBP11.7□□□□□ -0.54
LINC00540-203ENST00000631321 CACNG6Q9BXT2 260 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 OR51J1Q9H342 316 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 Q9N2J8 555 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 STMN3Q9NZ72 180 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 TEKT2Q9UIF3 430 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 ZNF337Q9Y3M9 751 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 ADAM18Q9Y3Q7 739 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 CLDN16Q9Y5I7 305 aa11.7□□□□□ -0.54
LINC00540-203ENST00000631321 TRAV6A0A075B6T7 132 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 TEX13CA0A0J9YWL9 993 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 A0A1W2PPK0 400 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 SERINC4A6NH21 518 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 CT45A8P0DMV1 189 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 CT45A9P0DMV2 189 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 EN2P19622 333 aaPredicted RBP11.69□□□□□ -0.54
LINC00540-203ENST00000631321 DRD1P21728 446 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 GPR3P46089 330 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 SNRPD2P62316 118 aaKnown RBP11.69□□□□□ -0.54
LINC00540-203ENST00000631321 CT45A2Q5DJT8 189 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 TMEM31Q5JXX7 168 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 SLC22A10Q63ZE4 541 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 BTN2A1Q7KYR7 527 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 NANOGNBQ7Z5D8 188 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 CDH24Q86UP0 819 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 ZNF595Q8IYB9 648 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 OR51L1Q8NGJ5 315 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 TTC9Q92623 222 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 RBM18Q96H35 190 aaKnown RBP11.69□□□□□ -0.54
LINC00540-203ENST00000631321 GPR137Q96N19 417 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 OR14A2Q96R54 314 aa11.69□□□□□ -0.54
LINC00540-203ENST00000631321 TTTY10Q9BZA0 68 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms