RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 FUNDC2Q9BWH2 189 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CAB39LQ9H9S4 337 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 IL23AQ9NPF7 189 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 ABCC13Q9NSE7 274 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 FBXO4Q9UKT5 387 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 AGO1Q9UL18 857 aaKnown RBP4.39□□□□□ -1.71
SDCBP-213ENST00000630925 ANKRD50Q9ULJ7 1429 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 PDE10AQ9Y233 779 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 NME7Q9Y5B8 376 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CSNK1G3Q9Y6M4 447 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 CDH10Q9Y6N8 788 aa4.39□□□□□ -1.71
SDCBP-213ENST00000630925 PPIP5K1Q6PFW1 1433 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 SHISA7A6NL88 538 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 E9PAM4 449 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 F8W036 122 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 M0R036 132 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 M0R3G1 203 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 CCRL2O00421 344 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 ARPC1BO15143 372 aaKnown RBP4.38□□□□□ -1.71
SDCBP-213ENST00000630925 MAGEB4O15481 346 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-213ENST00000630925 TGOLN2O43493 480 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 RAMP3O60896 148 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 CEACAM4O75871 244 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 FARS2O95363 451 aaKnown RBP4.38□□□□□ -1.71
SDCBP-213ENST00000630925 TNFAIP8O95379 198 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 PLEKHA8P1O95397 391 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 TSPAN13O95857 204 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 IGHA1P01876 353 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 HLA-DQA2P01906 255 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 VTNP04004 478 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 HIST1H2AGP0C0S8 130 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-213ENST00000630925 THRAP10827 490 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 MYL2P10916 166 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 HOXB2P14652 356 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 WARSP23381 471 aaKnown RBP4.38□□□□□ -1.71
SDCBP-213ENST00000630925 GJB2P29033 226 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 SRD5A2P31213 254 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 DDOSTP39656 456 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 EFNB2P52799 333 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 TMEM50BP56557 158 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 HHEXQ03014 270 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 CTTNQ14247 550 aaKnown RBP4.38□□□□□ -1.71
SDCBP-213ENST00000630925 CSRP2Q16527 193 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF74Q16587 644 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 PLEKHN1Q494U1 663 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-213ENST00000630925 C22orf42Q6IC83 251 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 DNM1P34Q6PK57 102 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 RPTNQ6XPR3 784 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 STOX1Q6ZVD7 989 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 SV2AQ7L0J3 742 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 LINGO2Q7L985 606 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 NUFIP2Q7Z417 695 aaKnown RBP4.38□□□□□ -1.71
SDCBP-213ENST00000630925 GOLGA7Q7Z5G4 137 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-213ENST00000630925 ERI1Q8IV48 349 aaKnown RBP4.38□□□□□ -1.71
SDCBP-213ENST00000630925 TMEM251Q8N6I4 163 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 FAM98AQ8NCA5 519 aaKnown RBP4.38□□□□□ -1.71
SDCBP-213ENST00000630925 CCDC54Q8NEL0 328 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 OR11L1Q8NGX0 322 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 SPATA22Q8NHS9 363 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 PPP4R1Q8TF05 950 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 HIST1H2ACQ93077 130 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 RNF183Q96D59 192 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 SCRN2Q96FV2 425 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 CXorf58Q96LI9 332 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 TIMM29Q9BSF4 260 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF2Q9BSG1 426 aaPredicted RBP4.38□□□□□ -1.71
SDCBP-213ENST00000630925 DDA1Q9BW61 102 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 ULBP1Q9BZM6 244 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 LAT2Q9GZY6 243 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 CHRNA10Q9GZZ6 450 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 Q9H8V8 135 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 SLC52A3Q9NQ40 469 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 CTPS2Q9NRF8 586 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 MRPS28Q9Y2Q9 187 aaKnown RBP4.38□□□□□ -1.71
SDCBP-213ENST00000630925 FKBP7Q9Y680 259 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 U3KQE9 123 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 CEMIPQ8WUJ3 1361 aa4.38□□□□□ -1.71
SDCBP-213ENST00000630925 A0A1B0GVI7 797 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 A0A1W2PRD5 423 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 CASTOR2A6NHX0 329 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 H0Y980 276 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 H0YL77 283 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 J3QR06 171 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 TMEM50AO95807 157 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 KLK1P06870 262 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 RFPL3SP0C7P2 107 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ADRB3P13945 408 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 NQO1P15559 274 aaKnown RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ENGP17813 658 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 PRLHRP49683 370 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 DNA2P51530 1060 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 RANP62826 216 aaKnown RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF45Q02386 682 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 OC90Q02509 493 aaPredicted RBP4.37□□□□□ -1.71
SDCBP-213ENST00000630925 ZNF844Q08AG5 666 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 UBE2V1Q13404 147 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 IL18R1Q13478 541 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 PDSS1Q5T2R2 415 aa4.37□□□□□ -1.71
SDCBP-213ENST00000630925 PRAMEF17Q5VTA0 474 aa4.37□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms