RNA–Protein interactions for RNA: ENST00000627109.2

CTNNA1-244, Transcript of catenin alpha 1, humanhuman

TSL 5 BASIC

Gene CTNNA1, Length 3,831 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-244ENST00000627109 MOSPD2Q8NHP6 518 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 LIPHQ8WWY8 451 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 CMTM3Q96MX0 182 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 DPH1Q9BZG8 443 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 ENKD1Q9H0I2 346 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 RNF121Q9H920 327 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 NLKQ9UBE8 527 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 ST6GALNAC2Q9UJ37 374 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 MRPS2Q9Y399 296 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 RP1L1Q8IWN7 2480 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 LOC105369274A0A096LPK9 316 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 LOC102723532A0A0G2JNH3 316 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 DAPL1A0PJW8 107 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 ZC3H12DA2A288 527 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 SHISA7A6NL88 538 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 OGG1O15527 345 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 HNRNPA2B1P22626 353 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 GCH1P30793 250 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 RAB38P57729 211 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 CDK10Q15131 360 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 SF3A2Q15428 464 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 NUP54Q7Z3B4 507 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 OR4N4Q8N0Y3 316 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 CADM2Q8N3J6 435 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 ACBD7Q8N6N7 88 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 CYB561A3Q8NBI2 242 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 FAM71CQ8NEG0 241 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 OR5M3Q8NGP4 307 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 FANK1Q8TC84 345 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 CCNL2Q96S94 520 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 GPX7Q96SL4 187 aaPredicted RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 TMEM246Q9BRR3 403 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 HCAR1Q9BXC0 346 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 DNAJB12Q9NXW2 375 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 USP36Q9P275 1121 aaKnown RBP6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 CHRNA9Q9UGM1 479 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 NOX1Q9Y5S8 564 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 SPACA6W5XKT8 324 aa6.6□□□□□ -1.35
CTNNA1-244ENST00000627109 OTOGLQ3ZCN5 2332 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 TRAV1-2A0A0B4J238 106 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 SLC22A31A6NKX4 558 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 FAM47E-STBD1D6RA91 191 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 OR10H2O60403 315 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 LDB3O75112 727 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 CPNE3O75131 537 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 SLC43A1O75387 559 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 RCBTB2O95199 551 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 CT62P0C5K7 136 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 SLC35E2P0CK97 266 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 FUT1P19526 365 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 ALAS2P22557 587 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 NUP62P37198 522 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 TAS2R43P59537 309 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 POU4F2Q12837 409 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 TNK1Q13470 666 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 GPR18Q14330 331 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 CNIH2Q6PI25 160 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 PAMR1Q6UXH9 720 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 IL20RBQ6UXL0 311 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 PARGQ86W56 976 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF761Q86XN6 746 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 GPALPP1Q8IXQ4 340 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 ZSCAN1Q8NBB4 408 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 PFN4Q8NHR9 129 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 RERGQ96A58 199 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 ISG20L2Q9H9L3 353 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 MCCC2Q9HCC0 563 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 HPF1Q9NWY4 346 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 FLRT3Q9NZU0 649 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 NCDNQ9UBB6 729 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 CAMK2AQ9UQM7 478 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 SLC35A3Q9Y2D2 325 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 TP53BP1Q12888 1972 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 A0A0J9YY10 115 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 hCG_1807616A0A1W2PRN6 198 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 H0YGG7 62 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 J3QLW9 94 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 GMFGO60234 142 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF217O75362 1048 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 RFPL3O75679 317 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 CLPSP04118 112 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 ZNF19P17023 458 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 S100A1P23297 94 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 RBMS1P29558 406 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 ARF3P61204 181 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 BTG1P62324 171 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 RPS4XP62701 263 aaKnown RBP6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 PSG6Q00889 435 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 FGFBP1Q14512 234 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 NNATQ16517 81 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 AMZ1Q400G9 498 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 YIF1BQ5BJH7 314 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 PRRT3Q5FWE3 981 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 FAM209AQ5JX71 171 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 UNQ9370/PRO34162Q6UXP9 181 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 THSD4Q6ZMP0 1018 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 GLCCI1Q86VQ1 547 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 LRRC28Q86X40 367 aaPredicted RBP6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 Q8NFD4 153 aa6.59□□□□□ -1.35
CTNNA1-244ENST00000627109 OR51L1Q8NGJ5 315 aa6.59□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms