RNA–Protein interactions for RNA: ENST00000625716.2

TCF4-249, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 359 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-249ENST00000625716 DDIT4LQ96D03 193 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 ZG16BQ96DA0 208 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 SPDL1Q96EA4 605 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 THOC1Q96FV9 657 aaKnown RBP5.7□□□□□ -1.5
TCF4-249ENST00000625716 AURKBQ96GD4 344 aaPredicted RBP5.7□□□□□ -1.5
TCF4-249ENST00000625716 ZC3HAV1LQ96H79 300 aaKnown RBP5.7□□□□□ -1.5
TCF4-249ENST00000625716 WFIKKN1Q96NZ8 548 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 KLHDC3Q9BQ90 382 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 HDHD5Q9BXW7 423 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 SRXN1Q9BYN0 137 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 SLC38A1Q9H2H9 487 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 GP6Q9HCN6 339 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 GCM1Q9NP62 436 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 CTPS2Q9NRF8 586 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 SLC6A13Q9NSD5 602 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 KLHL28Q9NXS3 571 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 KLHL9Q9P2J3 617 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 KLHL13Q9P2N7 655 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 NIPSNAP3AQ9UFN0 247 aaPredicted RBP5.7□□□□□ -1.5
TCF4-249ENST00000625716 CHRNA9Q9UGM1 479 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 PRDM4Q9UKN5 801 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 CORO2BQ9UQ03 480 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 IFT52Q9Y366 437 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 PCDHB14Q9Y5E9 798 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 HCFC1P51610 2035 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 CACNA1DQ01668 2161 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 PCNX1Q96RV3 2341 aa5.7□□□□□ -1.5
TCF4-249ENST00000625716 FREM3P0C091 2139 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 CACNA1CQ13936 2221 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 NBPF19A0A087WUL8 3843 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 TMED7-TICAM2A0A0A6YYA0 188 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 IGHV3-15A0A0B4J1V0 119 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 A0A1W2PP18 115 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 CLDN24A6NM45 220 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 AP3D1O14617 1153 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 ANGPT2O15123 496 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 PSPNO60542 156 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 EIF1BO60739 113 aaKnown RBP5.69□□□□□ -1.5
TCF4-249ENST00000625716 EDF1O60869 148 aaKnown RBP5.69□□□□□ -1.5
TCF4-249ENST00000625716 NTN1O95631 604 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 BPNT1O95861 308 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 C1QCP02747 245 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 TFPTP0C1Z6 253 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 IL32P24001 234 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 TACR3P29371 465 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 AGTR1P30556 359 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 DNAJA1P31689 397 aaKnown RBP5.69□□□□□ -1.5
TCF4-249ENST00000625716 SLC1A3P43003 542 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 DIO1P49895 249 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 MAP2K6P52564 334 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 ART1P52961 327 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 OR2B6P58173 313 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 EPS8Q12929 822 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 KEAP1Q14145 624 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 GUSBP1Q15486 140 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 GTDC1Q4AE62 458 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 GCNT6Q5T4J0 391 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 PRAMEF8Q5VWM4 474 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 PRAMEF7Q5VXH5 474 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 MTDHQ86UE4 582 aaKnown RBP5.69□□□□□ -1.5
TCF4-249ENST00000625716 VRK2Q86Y07 508 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 ADGRG3Q86Y34 549 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 KRT73Q86Y46 540 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 ZNF100Q8IYN0 542 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 CADM2Q8N3J6 435 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 FAM71CQ8NEG0 241 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 STEAP2Q8NFT2 490 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 BBS10Q8TAM1 723 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 ABHD3Q8WU67 409 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 NRGNQ92686 78 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 NINJ1Q92982 152 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 PIK3IP1Q96FE7 263 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 TMEM19Q96HH6 336 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 C20orf173Q96LM9 149 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 ZNF607Q96SK3 696 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 NAA11Q9BSU3 229 aaPredicted RBP5.69□□□□□ -1.5
TCF4-249ENST00000625716 SPATA5L1Q9BVQ7 753 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 CCDC106Q9BWC9 280 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 SPATA9Q9BWV2 254 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 TAPBPLQ9BX59 468 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 ASPNQ9BXN1 380 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 PAIP1Q9H074 479 aaKnown RBP5.69□□□□□ -1.5
TCF4-249ENST00000625716 COQ10BQ9H8M1 238 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 A4GALTQ9NPC4 353 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 MRGBPQ9NV56 204 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 EMC3Q9P0I2 261 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 RPS6KB2Q9UBS0 482 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 LEF1Q9UJU2 399 aaPredicted RBP5.69□□□□□ -1.5
TCF4-249ENST00000625716 SLC13A4Q9UKG4 626 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 ZNF443Q9Y2A4 671 aaPredicted RBP5.69□□□□□ -1.5
TCF4-249ENST00000625716 GPR52Q9Y2T5 361 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 NDUFAF1Q9Y375 327 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 TMED7Q9Y3B3 224 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 HDGFL3Q9Y3E1 203 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 TESMINQ9Y4I5 508 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 MAST4O15021 2626 aa5.69□□□□□ -1.5
TCF4-249ENST00000625716 NAV2Q8IVL1 2488 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 KIAA1549Q9HCM3 1950 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 CDHR4A6H8M9 788 aa5.68□□□□□ -1.5
TCF4-249ENST00000625716 SLC22A31A6NKX4 558 aa5.68□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms