RNA–Protein interactions for RNA: ENST00000622183.1

CPNE3-213, Transcript of copine 3, humanhuman

TSL 3

Gene CPNE3, Length 156 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3-213ENST00000622183 PGAP1Q75T13 922 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 EGFL6Q8IUX8 553 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 ZBED8Q8IZ13 594 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 OR9K2Q8NGE7 335 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 OR56B2PQ8NGI1 322 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 OR52H1Q8NGJ2 320 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 SH3TC1Q8TE82 1336 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 CHCHD10Q8WYQ3 142 aaPredicted RBP3.57□□□□□ -1.84
CPNE3-213ENST00000622183 UFD1Q92890 307 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 CXorf40BQ96DE9 158 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 CHRDL1Q9BU40 450 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 AZI2Q9H6S1 392 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 PTGES2Q9H7Z7 377 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 TM9SF3Q9HD45 589 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 TMCO1Q9UM00 188 aa3.57□□□□□ -1.84
CPNE3-213ENST00000622183 IGKV1D-8A0A087WSZ0 117 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 IGHV1OR21-1A0A087WYE8 117 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 FAM47DPA6NHR8 397 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 HAS3O00219 553 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 HIP1O00291 1037 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 UGT1A9O60656 530 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 STAMBPO95630 424 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 LGI1O95970 557 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 UQCRFS1P1P0C7P4 283 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 RBMY1CP0DJD4 496 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 ATP1B2P14415 290 aaPredicted RBP3.56□□□□□ -1.84
CPNE3-213ENST00000622183 IL12AP29459 219 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 GDI1P31150 447 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 RDXP35241 583 aaKnown RBP3.56□□□□□ -1.84
CPNE3-213ENST00000622183 TAF6P49848 677 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 DUSP7Q16829 419 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 C11orf71Q6IPW1 123 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 CDR2LQ86X02 465 aaPredicted RBP3.56□□□□□ -1.84
CPNE3-213ENST00000622183 VRK2Q86Y07 508 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 OR4K14Q8NGD5 310 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 ZPLD1Q8TCW7 415 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 ANKRD49Q8WVL7 239 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 OR1E3Q8WZA6 343 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 PAGE5Q96GU1 130 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 PLIN2Q99541 437 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 MAPKAP1Q9BPZ7 522 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 ANKRD19PQ9H560 264 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 SUDS3Q9H7L9 328 aaPredicted RBP3.56□□□□□ -1.84
CPNE3-213ENST00000622183 NIPAL2Q9H841 368 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 FOLH1BQ9HBA9 442 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 NMRAL1Q9HBL8 299 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 ETNK2Q9NVF9 386 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 MARCH5Q9NX47 278 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 CTNNA3Q9UI47 895 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 STAP1Q9ULZ2 295 aa3.56□□□□□ -1.84
CPNE3-213ENST00000622183 ZFP92A6NM28 416 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 ZNF716A6NP11 495 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 GFYI3L273 518 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 HSD17B6O14756 317 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 CIB2O75838 187 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 OXSR1O95747 527 aaPredicted RBP3.55□□□□□ -1.84
CPNE3-213ENST00000622183 ZNF735P0CB33 412 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 SHMT2P34897 504 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 GYG1P46976 350 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 SUCLG1P53597 346 aaKnown RBP3.55□□□□□ -1.84
CPNE3-213ENST00000622183 ZNF45Q02386 682 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 IDI1Q13907 227 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 GK3PQ14409 553 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 OXA1LQ15070 435 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 KYAT1Q16773 422 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 PARP15Q460N3 678 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 EOGTQ5NDL2 527 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 SAMD4BQ5PRF9 694 aaKnown RBP3.55□□□□□ -1.84
CPNE3-213ENST00000622183 C9orf129Q5T035 196 aaKnown RBP3.55□□□□□ -1.84
CPNE3-213ENST00000622183 HSDL2Q6YN16 418 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 FAM228AQ86W67 206 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 RDH10Q8IZV5 341 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 FTMTQ8N4E7 242 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 C14orf178Q8N769 122 aaPredicted RBP3.55□□□□□ -1.84
CPNE3-213ENST00000622183 CCDC71LQ8N9Z2 235 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 BBS1Q8NFJ9 593 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 FAM110BQ8TC76 370 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 SLC2A14Q8TDB8 520 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 CNOT6LQ96LI5 555 aaKnown RBP3.55□□□□□ -1.84
CPNE3-213ENST00000622183 ZNF641Q96N77 438 aaPredicted RBP3.55□□□□□ -1.84
CPNE3-213ENST00000622183 OXGR1Q96P68 337 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 HIST1H4GQ99525 98 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 CCDC77Q9BR77 488 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 MRPL45Q9BRJ2 306 aaKnown RBP3.55□□□□□ -1.84
CPNE3-213ENST00000622183 NICN1Q9BSH3 213 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 KRTAP17-1Q9BYP8 105 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 SELENOIQ9C0D9 397 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 ZDHHC11Q9H8X9 412 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 THUMPD1Q9NXG2 353 aaKnown RBP3.55□□□□□ -1.84
CPNE3-213ENST00000622183 CD274Q9NZQ7 290 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 UGT2A1Q9Y4X1 527 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 PEX16Q9Y5Y5 336 aa3.55□□□□□ -1.84
CPNE3-213ENST00000622183 RALGAPA1Q6GYQ0 2036 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 PLEKHH1Q9ULM0 1364 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 TTC21BQ7Z4L5 1316 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 PPIAL4EA0A075B759 164 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 LOC110117498-PIK3R3F6TDL0 507 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 TPM2P07951 284 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 PPIAL4FP0DN26 164 aa3.54□□□□□ -1.84
CPNE3-213ENST00000622183 CD1CP29017 333 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms