RNA–Protein interactions for RNA: ENST00000622138.4

TRIM49B-202, Transcript of tripartite motif containing 49B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM49B, Length 2,162 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49B-202ENST00000622138 SCN5AQ14524 2016 aa6.94□□□□□ -1.3
TRIM49B-202ENST00000622138 TBC1D3DA0A087WVF3 549 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TBC1D3IA0A087WXS9 549 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TBC1D3EA0A087X179 549 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TBC1D3KA0A087X1G2 549 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 LOC101059915A0A1B0GWI6 518 aaPredicted RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TBC1D3FA6NER0 549 aaPredicted RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TBC1D3LB9A6J9 549 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 ZNF197O14709 1029 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 BNIP3LO60238 219 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 F12P00748 615 aaPredicted RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 OPN1SWP03999 348 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 C1SP09871 688 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 LIMS3P0CW19 117 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 LIMS4P0CW20 117 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 COX7A2P14406 83 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 CSF2RAP15509 400 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 RAB5AP20339 215 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TBXA2RP21731 343 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 CPT2P23786 658 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 NSG1P42857 185 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 H2BFSP57053 126 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 PFN3P60673 137 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 RAE1P78406 368 aaKnown RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 SRSF11Q05519 484 aaKnown RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 CHIT1Q13231 466 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TRAM1Q15629 374 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 HMGN3Q15651 99 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TOMM34Q15785 309 aaPredicted RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 SLC5A12Q1EHB4 618 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 EOGTQ5NDL2 527 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 LYPLAL1Q5VWZ2 237 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TXNDC8Q6A555 127 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TBC1D3CQ6IPX1 549 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 PAPD4Q6PIY7 484 aaKnown RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TSSK4Q6SA08 328 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 CLEC9AQ6UXN8 241 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 SLC36A4Q6YBV0 504 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 NR2C2APQ86WQ0 139 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 NPAS4Q8IUM7 802 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TBC1D3Q8IZP1 549 aaPredicted RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 FBXO15Q8NCQ5 510 aaPredicted RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 DNAAF1Q8NEP3 725 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 SDR9C7Q8NEX9 313 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 POC1BQ8TC44 478 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 ASB11Q8WXH4 323 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 BSCL2Q96G97 398 aaPredicted RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 COPS8Q99627 209 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 NDUFAF3Q9BU61 184 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 PINK1Q9BXM7 581 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 RIMS4Q9H426 269 aaPredicted RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 CERS4Q9HA82 394 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 KCNK12Q9HB15 430 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 ASCL3Q9NQ33 180 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 RNF186Q9NXI6 227 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 CALML5Q9NZT1 146 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 ABRACLQ9P1F3 81 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 RCE1Q9Y256 329 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 RUVBL1Q9Y265 456 aaKnown RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 IGLV3-16A0A075B6K0 115 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TRBV23OR9-2A0A075B6M9 112 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 C2orf92A0A1B0GVN3 265 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 A0A1W2PQ45 241 aaPredicted RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 A0A1W2PQY0 241 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 C1orf226A1L170 272 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TMEM202A6NGA9 273 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 PRAMEF25A6NGN4 478 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TMEM210A6NLX4 147 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 OR6C76A6NM76 312 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 E7EQ34 232 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 ANHXE9PGG2 379 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 NPIPB8E9PQR5 432 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 HOXA2O43364 376 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 NDUFB6O95139 128 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 CD79AP11912 226 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 ETFAP13804 333 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 NME1P15531 152 aaKnown RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 S1PR1P21453 382 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 G0S2P27469 103 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 SOX18P35713 384 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 FEN1P39748 380 aaKnown RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 MAGEB1P43366 347 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 MAPK9P45984 424 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 CCR8P51685 355 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 AKR1C2P52895 323 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 F2RL1P55085 397 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 PTSQ03393 145 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 AKR1C1Q04828 323 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 PJVKQ0ZLH3 352 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 TMEM115Q12893 351 aaPredicted RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 RSU1Q15404 277 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 CCSMST1Q4G0I0 132 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 RNASE12Q5GAN4 147 aaKnown RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 KRBOX4Q5JUW0 171 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 NCMAPQ5T1S8 102 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 FAM46CQ5VWP2 391 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 SFRP4Q6FHJ7 346 aaPredicted RBP6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 B3GLCTQ6Y288 498 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 FJX1Q86VR8 437 aa6.93□□□□□ -1.3
TRIM49B-202ENST00000622138 CBARPQ8N350 705 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms