RNA–Protein interactions for RNA: ENST00000619322.4

CBWD3-215, Transcript of COBW domain containing 3, human

TSL 5

Gene CBWD3, Length 3,301 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CBWD3-215	ENST00000619322	COQ8B	Q96D53	544 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	TMCO6	Q96DC7	493 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	LINGO1	Q96FE5	620 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	ITCH	Q96J02	903 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	SAV1	Q9H4B6	383 aa	Predicted RBP	4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	RIBC2	Q9H4K1	309 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	RPF2	Q9H7B2	306 aa	Known RBP	4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	NOL11	Q9H8H0	719 aa	Known RBP	4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	GORASP2	Q9H8Y8	452 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	CD274	Q9NZQ7	290 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	COPS7A	Q9UBW8	275 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	HS3ST1	O14792	307 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	TNFAIP8	O95379	198 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	IGLV1-44	P01699	117 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	LINC00032	P0C843	101 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	UMPS	P11172	480 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	TSPAN8	P19075	237 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	ADARB1	P78563	741 aa	Known RBP	4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	VWA2	Q5GFL6	755 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	FAM71E1	Q6IPT2	247 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	GPRIN3	Q6ZVF9	776 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	GGN	Q86UU5	652 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	DHFR2	Q86XF0	187 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	DDIAS	Q8IXT1	998 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	ZNF440	Q8IYI8	595 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	CYP4Z2P	Q8N1L4	340 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	FAM83F	Q8NEG4	500 aa	Predicted RBP	4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	LIPH	Q8WWY8	451 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	ASB15	Q8WXK1	588 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	C18orf12	Q96KH6	178 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	COL21A1	Q96P44	957 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	ACTR8	Q9H981	624 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	SERHL	Q9NQF3	203 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	SH2B3	Q9UQQ2	575 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	ANGPTL3	Q9Y5C1	460 aa		4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	SPEN	Q96T58	3664 aa	Known RBP	4.84	□□□□□ -1.63
CBWD3-215	ENST00000619322	ATP6AP2	A0A1C7CYW4	349 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322		A8MXK9	166 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	C19orf84	I3L1E1	186 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322		J3QLI3	93 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	ZNF701	M0R085	212 aa	Predicted RBP	4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	AKAP10	O43572	662 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	CYTIP	O60759	359 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	PRAMEF4	O60810	478 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	TIPRL	O75663	272 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	STK16	O75716	305 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	SLC22A3	O75751	556 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	ATP6AP2	O75787	350 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	CCNK	O75909	580 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	DANCR	P0C864	163 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	CPM	P14384	443 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	ZNF23	P17027	643 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	GGT1	P19440	569 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	PTGER1	P34995	402 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	CASP3	P42574	277 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	HTR3A	P46098	478 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	POLR2J	P52435	117 aa	Known RBP	4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	UFM1	P61960	85 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	GXYLT1	Q4G148	440 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	PRAMEF9	Q5VWM5	478 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	NXN	Q6DKJ4	435 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	MEX3B	Q6ZN04	569 aa	Known RBP	4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	FKBP9P1	Q75LS8	142 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	GPR180	Q86V85	440 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	CANT1	Q8WVQ1	401 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	BORCS5	Q969J3	196 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	MMAB	Q96EY8	250 aa	Predicted RBP	4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	LRR1	Q96L50	414 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	MRGPRX4	Q96LA9	322 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	TSSK3	Q96PN8	268 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	FYTTD1	Q96QD9	318 aa	Known RBP	4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	UGT2B28	Q9BY64	529 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	TINAGL1	Q9GZM7	467 aa	Predicted RBP	4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	CCDC90B	Q9GZT6	254 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	NANOG	Q9H9S0	305 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	ZBTB20	Q9HC78	741 aa	Predicted RBP	4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	ZFP57	Q9NU63	452 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	ZNF281	Q9Y2X9	895 aa		4.84	□□□□□ -1.64
CBWD3-215	ENST00000619322	SPTBN4	Q9H254	2564 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	PRAMEF25	A6NGN4	478 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	CLCA1	A8K7I4	914 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	SUPT3H	B4E1H0	165 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	SULT1C4	O75897	302 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	NR2F6	P10588	404 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	CYP4B1	P13584	511 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	PVR	P15151	417 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	OR3A2	P47893	321 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	GSK3B	P49841	420 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	HTR6	P50406	440 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	HMGCS1	Q01581	520 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	GTF2H2	Q13888	395 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	RAB39A	Q14964	217 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	SPCS2	Q15005	226 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	ABRAXAS2	Q15018	415 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	NPTX1	Q15818	432 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	C18orf21	Q32NC0	220 aa	Predicted RBP	4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	CYBRD1	Q53TN4	286 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	CLVS2	Q5SYC1	327 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	NXNL2	Q5VZ03	156 aa		4.83	□□□□□ -1.64
CBWD3-215	ENST00000619322	GTF2IRD2B	Q6EKJ0	949 aa		4.83	□□□□□ -1.64

Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms