RNA–Protein interactions for RNA: ENST00000617998.4

POLR2A-209, Transcript of RNA polymerase II subunit A, humanhuman

TSL 1 (best)

Gene POLR2A, Length 6,751 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2A-209ENST00000617998 SLC45A3Q96JT2 553 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 SLC26A1Q9H2B4 701 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 SLCO1C1Q9NYB5 712 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 DNAJB9Q9UBS3 223 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 CHRNA9Q9UGM1 479 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 ZNF639Q9UID6 485 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 A0A1W2PNR3 127 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 PPA1Q15181 289 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 OR2T5Q6IEZ7 315 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 IZUMO2Q6UXV1 221 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 L3MBTL4Q8NA19 623 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 OR2T29Q8NH02 315 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 TMEM239Q8WW34 195 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 GLRX2Q9NS18 164 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 WDR1O75083 606 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 IFNA21P01568 189 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 ACP1P24666 158 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 TAS2R43P59537 309 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 GPR139Q6DWJ6 353 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 FAM57BQ71RH2 274 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 ZFP90Q8TF47 636 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 C10orf82Q8WW14 230 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 LYSMD1Q96S90 227 aa10.06□□□□□ -0.8
POLR2A-209ENST00000617998 ZNF732B4DXR9 585 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 NDUFB3O43676 98 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 DOK2O60496 412 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 NR1H2P55055 460 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 AP3S2P59780 193 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 ERVK-25P63136 954 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 ACTC1P68032 377 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 ACTA1P68133 377 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 RPS26P11Q5JNZ5 115 aaPredicted RBP10.05□□□□□ -0.8
POLR2A-209ENST00000617998 IL17RDQ8NFM7 739 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 HAS2Q92819 552 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 FAM46AQ96IP4 442 aaKnown RBP10.05□□□□□ -0.8
POLR2A-209ENST00000617998 TRIM8Q9BZR9 551 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 WWTR1Q9GZV5 400 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 ACSS1Q9NUB1 689 aaPredicted RBP10.05□□□□□ -0.8
POLR2A-209ENST00000617998 IGHV3-15A0A0B4J1V0 119 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 POU3F3P20264 500 aaPredicted RBP10.05□□□□□ -0.8
POLR2A-209ENST00000617998 GINS1Q14691 196 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 VASNQ6EMK4 673 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 S100A7AQ86SG5 101 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 ST8SIA4Q92187 359 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 DEFA4P12838 97 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 ZNF789Q5FWF6 425 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 ZNF836Q6ZNA1 936 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 LINGO2Q7L985 606 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 AMER2Q8N7J2 671 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 LKAAEAR1Q8TD35 194 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 LMF1Q96S06 567 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 RTL8AQ9BWD3 113 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 IER3IP1Q9Y5U9 82 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 ZNF195O14628 629 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 PVALBP20472 110 aaPredicted RBP10.05□□□□□ -0.8
POLR2A-209ENST00000617998 FRMPD2BQ6IN97 320 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 SLCO4C1Q6ZQN7 724 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 AHSA2Q719I0 299 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 SSX8Q7RTT4 187 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 OR52A5Q9H2C5 316 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 SESN1Q9Y6P5 492 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 TEX46H3BTG2 121 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 ZNF780AO75290 641 aaPredicted RBP10.05□□□□□ -0.8
POLR2A-209ENST00000617998 SP1P08047 785 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 THRBP10828 461 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 INPP5JQ15735 1006 aaPredicted RBP10.05□□□□□ -0.8
POLR2A-209ENST00000617998 MICAQ29983 383 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 PARP8Q8N3A8 854 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 IL1F10Q8WWZ1 152 aa10.05□□□□□ -0.8
POLR2A-209ENST00000617998 SSU72Q9NP77 194 aaKnown RBP10.05□□□□□ -0.8
POLR2A-209ENST00000617998 SSNA1O43805 119 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 PRKRAO75569 313 aaKnown RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 DIRAS1O95057 198 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 ACTL6AO96019 429 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 RLN2P04090 185 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 HTR1EP28566 365 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 SLC48A1Q6P1K1 146 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 PLD6Q8N2A8 252 aaKnown RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 MEMO1Q9Y316 297 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 ATG4BQ9Y4P1 393 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 RGPD3A6NKT7 1758 aaPredicted RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 TRIP12Q14669 1992 aaPredicted RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 LRIT2A6NDA9 550 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 MRPL2Q5T653 305 aaKnown RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 ZNF704Q6ZNC4 412 aaPredicted RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 OR10X1Q8NGY0 326 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 ZNF317Q96PQ6 595 aaPredicted RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 STOML2Q9UJZ1 356 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 PGGT1BP53609 377 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 GLYR1Q49A26 553 aaPredicted RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 H1FNTQ75WM6 255 aaPredicted RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 SLC35D2Q76EJ3 337 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 PTOV1Q86YD1 416 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 ZC3H10Q96K80 434 aaKnown RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 ZNF184Q99676 751 aaPredicted RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 NT5DC2Q9H857 520 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 PRMT8Q9NR22 394 aaPredicted RBP10.04□□□□□ -0.8
POLR2A-209ENST00000617998 RAB40ALP0C0E4 278 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 OR8G3PP0DMU2 310 aa10.04□□□□□ -0.8
POLR2A-209ENST00000617998 TLE1Q04724 770 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms