RNA–Protein interactions for RNA: ENST00000616247.4

LMO3-235, Transcript of LIM domain only 3, humanhuman

TSL 5 BASIC

Gene LMO3, Length 3,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-235ENST00000616247 BSGP35613 385 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 MNDAP41218 407 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 HOXA1P49639 335 aaPredicted RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 P2RX1P51575 399 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 RAG2P55895 527 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 RPS15P62841 145 aaKnown RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 SIRPAP78324 504 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 EFNB1P98172 346 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 PDZK1IP1Q13113 114 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 OR7A5Q15622 319 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 NKPD1Q17RQ9 610 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 FNDC3BQ53EP0 1204 aaKnown RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 ZC3H14Q6PJT7 736 aaKnown RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 MBOAT2Q6ZWT7 520 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 MTSS1LQ765P7 747 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ZNF627Q7L945 461 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 PM20D2Q8IYS1 436 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 PUSL1Q8N0Z8 303 aaKnown RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 GJD3Q8N144 294 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 TRAM1L1Q8N609 369 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 OR4D10Q8NGI6 311 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 OR1S2Q8NGQ3 325 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 STK35Q8TDR2 534 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 GIMAP5Q96F15 307 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 TNFRSF13CQ96RJ3 184 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 LMF1Q96S06 567 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 MS4A8Q9BY19 250 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ANKRD19PQ9H560 264 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ESRP2Q9H6T0 727 aaKnown RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 SYNDIG1Q9H7V2 258 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ZNF334Q9HCZ1 680 aaPredicted RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 MRPS30Q9NP92 439 aaKnown RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 FBXO4Q9UKT5 387 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ZMIZ1Q9ULJ6 1067 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 MOKQ9UQ07 419 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ATG4BQ9Y4P1 393 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 V9GY05 133 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 SCN3AQ9NY46 2000 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 NAP1L6A6NFF2 107 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 M0QYG6 137 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ACOT7O00154 380 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 GRM6O15303 877 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 AKR7A3O95154 331 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 NFATC1O95644 943 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 IFNGP01579 166 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 FABP1P07148 127 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 HOXB1P14653 301 aaPredicted RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 PRLHRP49683 370 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 SKP1P63208 163 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 FKBP1BP68106 108 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 TDGQ13569 410 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 RBMS2Q15434 407 aaKnown RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 TRAM1Q15629 374 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 OR4C11Q6IEV9 310 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 TMEM71Q6P5X7 295 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 DEFB128Q7Z7B8 93 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 RANBP3LQ86VV4 465 aaPredicted RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 SVBPQ8N300 66 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 GTPBP8Q8N3Z3 284 aaPredicted RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 KCT2Q8NC54 265 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 FAM71CQ8NEG0 241 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 OR5T2Q8NGG2 359 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 TMEM239Q8WW34 195 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 BPIFA2Q96DR5 249 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ZNF285Q96NJ3 590 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 VRK1Q99986 396 aaPredicted RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 SLC38A1Q9H2H9 487 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 C6orf106Q9H6K1 298 aaPredicted RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 NRIP3Q9NQ35 241 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 NPDC1Q9NQX5 325 aaPredicted RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 PRMT8Q9NR22 394 aaPredicted RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 PCDHB10Q9UN67 800 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ICKQ9UPZ9 632 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 MED31Q9Y3C7 131 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 DOCK6Q96HP0 2047 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 MYOFQ9NZM1 2061 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 OR6C68A6NDL8 312 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 C5orf51A6NDU8 294 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 SYT5O00445 386 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 GALR3O60755 368 aaPredicted RBP6.16□□□□□ -1.42
LMO3-235ENST00000616247 RPN2P04844 631 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ZGLP1P0C6A0 271 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 C6P13671 934 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ELNP15502 786 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 TIMP2P16035 220 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 CERS1P27544 350 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 DLSTP36957 453 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 TAS2R20P59543 309 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ZNF85Q03923 595 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 DUSP2Q05923 314 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 PON3Q15166 354 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 CST9Q5W186 159 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ZNF626Q68DY1 528 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 TMPRSS9Q7Z410 1059 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 OR4C16Q8NGL9 310 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 OR2A12Q8NGT7 310 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 OR10R2Q8NGX6 335 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ZNF461Q8TAF7 563 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 ZCCHC10Q8TBK6 192 aa6.16□□□□□ -1.42
LMO3-235ENST00000616247 PELI1Q96FA3 418 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms