RNA–Protein interactions for RNA: ENST00000615540.4

PDLIM5-222, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 6,219 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-222ENST00000615540 ZNF639Q9UID6 485 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 ANKRD12Q6UB98 2062 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 CTSVO60911 334 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 CHRNB1P11230 501 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 MAKP20794 623 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 TEAD1P28347 426 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 UGT2B10P36537 528 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 AFF3P51826 1226 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 PRSS53Q2L4Q9 553 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 TCEAL6Q6IPX3 200 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 LYPD4Q6UWN0 246 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 LYSMD2Q8IV50 215 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 GALNT6Q8NCL4 622 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 BEST4Q8NFU0 473 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 GHSRQ92847 366 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 ELOVL3Q9HB03 270 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 ACOXLQ9NUZ1 547 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 OSGIN1Q9UJX0 560 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 ASB4Q9Y574 426 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 HTR3EA5X5Y0 456 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 METTL21EPA6NDL7 271 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 ZSCAN5BA6NJL1 495 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 SYT7O43581 403 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 AKR1C4P17516 323 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 FXYD6P3P58550 94 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 C14orf28Q4W4Y0 310 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF511Q8NB15 262 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 COX14Q96I36 57 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 OPALINQ96PE5 141 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 DPCDQ9BVM2 203 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 RBM24Q9BX46 236 aaKnown RBP8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 GALNT9Q9HCQ5 603 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 KLHL13Q9P2N7 655 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 C19orf53Q9UNZ5 99 aaPredicted RBP8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 ADAM18Q9Y3Q7 739 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 A0A0B4J203 849 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 RBBP9O75884 186 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 OR7A10O76100 309 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 CSRP3P50461 194 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 INSL4Q14641 139 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 FBXO42Q6P3S6 717 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 CAMKMTQ7Z624 323 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 SFTPA2Q8IWL1 248 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 HIST1H2AAQ96QV6 131 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 GAREM1Q9H706 876 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 GSKIPQ9P0R6 139 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 RNF215Q9Y6U7 377 aa8.24□□□□□ -1.09
PDLIM5-222ENST00000615540 F5H5K5 113 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 SURF4O15260 269 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 CTNSO60931 367 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 HIST1H1CP16403 213 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF43P17038 809 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 TSFMP43897 325 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 PCBP4P57723 403 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 SNTB2Q13425 540 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ZMAT1Q5H9K5 638 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 UBE2NLQ5JXB2 153 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF584Q8IVC4 421 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 RNF113BQ8IZP6 322 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 GPR32P1Q8NGA4 272 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 GRPEL2Q8TAA5 225 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ABHD4Q8TB40 342 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 CCDC107Q8WV48 283 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ZG16BQ96DA0 208 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 LCORQ96JN0 433 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ALG12Q9BV10 488 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 UBE2ZQ9H832 354 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 RANGRFQ9HD47 186 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 FBXO34Q9NWN3 711 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 SCN10AQ9Y5Y9 1956 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF646O15015 1829 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 MEIOCA2RUB1 952 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 TLCD2A6NGC4 264 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 OR2AT4A6NND4 320 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 KDM4BO94953 1096 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 IL1AP01583 271 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 PTH2RP49190 550 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 FNTBP49356 437 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 SPIN3Q5JUX0 258 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 SLC6A19Q695T7 634 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 LRRN1Q6UXK5 716 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 MS4A15Q8N5U1 240 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 OR5J2Q8NH18 312 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 GOT1L1Q8NHS2 421 aaPredicted RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 STACQ99469 402 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 LMF2Q9BU23 707 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 PARPBPQ9NWS1 579 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ZNF638Q14966 1978 aaKnown RBP8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 BLACEA4D250 179 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 PHYHO14832 338 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 P04436 131 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 SDHBP21912 280 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 GIFP27352 417 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 CTBP2P56545 445 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 DHRS4L2Q6PKH6 230 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 FCRLAQ7L513 359 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 OR14A16Q8NHC5 309 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 TM9SF4Q92544 642 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ITFG2Q969R8 447 aa8.23□□□□□ -1.09
PDLIM5-222ENST00000615540 ORAI1Q96D31 301 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms