RNA–Protein interactions for RNA: ENST00000615468.4

TNFAIP3-208, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-208ENST00000615468 SNX33Q8WV41 574 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 TMEM159Q96B96 161 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 CXorf40BQ96DE9 158 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 TMEM169Q96HH4 297 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR2S2Q9NQN1 319 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 ZCCHC3Q9NUD5 404 aaKnown RBP9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 MBD1Q9UIS9 605 aaPredicted RBP9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 DYRK1BQ9Y463 629 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 A0A0G2JN53 185 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 TRAPPC13A5PLN9 417 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 CDHR4A6H8M9 788 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 RFPL4AA6NLU0 287 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 RFPL4AL1F8VTS6 287 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 RAD1O60671 282 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 CATP04040 527 aaKnown RBP9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 CSN2P05814 226 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 S100A2P29034 98 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 MPIP34949 423 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 EIF2S3P41091 472 aaKnown RBP9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 ELFN2Q5R3F8 820 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 YOD1Q5VVQ6 348 aaPredicted RBP9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR51S1Q8NGJ8 323 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 GOT1L1Q8NHS2 421 aaPredicted RBP9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 DVL3Q92997 716 aaPredicted RBP9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 TRMT2BQ96GJ1 504 aaKnown RBP9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 PRRC1Q96M27 445 aa9.6□□□□□ -0.87
TNFAIP3-208ENST00000615468 A0A1W2PPE3 182 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR5H14A6NHG9 310 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 ACOD1A6NK06 481 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 ACOT7O00154 380 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 CLN5O75503 358 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 CLDN11O75508 207 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 EOMESO95936 686 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 GALTP07902 379 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 SNRNP70P08621 437 aaKnown RBP9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 CCL5P13501 91 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 ECH1Q13011 328 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 TEAD2Q15562 447 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 TRAM1Q15629 374 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 PRAMEF17Q5VTA0 474 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 OLFML2AQ68BL7 652 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 CAMKMTQ7Z624 323 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 NUDT13Q86X67 352 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 ISOC2Q96AB3 205 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 TMEM41AQ96HV5 264 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 CLCC1Q96S66 551 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 PIGQQ9BRB3 760 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 BRF2Q9HAW0 419 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 WSB2Q9NYS7 404 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 TRBV2A0A0J9YWF9 115 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 H0YIV9 168 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 M0QZQ0 153 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 GSTZ1O43708 216 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 GJB5O95377 273 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 ACTL6AO96019 429 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 SPI1P17947 270 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 NDUFV2P19404 249 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 EDNRAP25101 427 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 P2RX1P51575 399 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 CASP6P55212 293 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 RGS8P57771 180 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 RING1Q06587 406 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 C3orf33Q6P1S2 294 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 COMTD1Q86VU5 262 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 ZNF561Q8N587 486 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 FBXO22Q8NEZ5 403 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 STEAP2Q8NFT2 490 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 OR51L1Q8NGJ5 315 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 NUBPLQ8TB37 319 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 SETD7Q8WTS6 366 aaKnown RBP9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 TMED6Q8WW62 240 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 SLC35G5Q96KT7 338 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 BBS4Q96RK4 519 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 PDCD1LG2Q9BQ51 273 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 NTNG1Q9Y2I2 539 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 GAPDHSO14556 408 aaPredicted RBP9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 KCNAB3O43448 404 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 IGHA1P01876 353 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 GALP22466 123 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 CERS1P27544 350 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 ACSM1Q08AH1 577 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 PRSS53Q2L4Q9 553 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 ZNF311Q5JNZ3 666 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 ETV3LQ6ZN32 361 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 ZCCHC2Q9C0B9 1178 aaKnown RBP9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 CHST6Q9GZX3 395 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 ZDHHC4Q9NPG8 344 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 MAN2C1Q9NTJ4 1040 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 SLC27A6Q9Y2P4 619 aa9.59□□□□□ -0.87
TNFAIP3-208ENST00000615468 C5orf52A6NGY3 159 aa9.58□□□□□ -0.88
TNFAIP3-208ENST00000615468 HMGN4O00479 90 aa9.58□□□□□ -0.88
TNFAIP3-208ENST00000615468 SMAD6O43541 496 aaKnown RBP9.58□□□□□ -0.88
TNFAIP3-208ENST00000615468 GKN3PP0CG01 181 aa9.58□□□□□ -0.88
TNFAIP3-208ENST00000615468 ABOP16442 354 aa9.58□□□□□ -0.88
TNFAIP3-208ENST00000615468 CDK2P24941 298 aa9.58□□□□□ -0.88
TNFAIP3-208ENST00000615468 PSMB10P40306 273 aa9.58□□□□□ -0.88
TNFAIP3-208ENST00000615468 MNDAP41218 407 aa9.58□□□□□ -0.88
TNFAIP3-208ENST00000615468 MAGEB1P43366 347 aa9.58□□□□□ -0.88
TNFAIP3-208ENST00000615468 TAS2R43P59537 309 aa9.58□□□□□ -0.88
TNFAIP3-208ENST00000615468 ST8SIA6P61647 398 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms