RNA–Protein interactions for RNA: ENST00000612485.1

PRKN-209, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 225 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-209ENST00000612485 TMEM19Q96HH6 336 aa15.31■□□□□ 0.04
PRKN-209ENST00000612485 C7orf26Q96N11 449 aa15.31■□□□□ 0.04
PRKN-209ENST00000612485 MALT1Q9UDY8 824 aa15.31■□□□□ 0.04
PRKN-209ENST00000612485 ZC3H12DA2A288 527 aaKnown RBP15.3■□□□□ 0.04
PRKN-209ENST00000612485 POLR3GO15318 223 aaPredicted RBP15.3■□□□□ 0.04
PRKN-209ENST00000612485 TGDSO95455 350 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 LY6G6DO95868 133 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 GPIP06744 558 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 SOD3P08294 240 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 DANCRP0C864 163 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 GKN3PP0CG01 181 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 MRPL19P49406 292 aaKnown RBP15.3■□□□□ 0.04
PRKN-209ENST00000612485 FAPQ12884 760 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 OR7E24Q6IFN5 339 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 CADM2Q8N3J6 435 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 LRRC8CQ8TDW0 803 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 GTF2H4Q92759 462 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 NEUROG1Q92886 237 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 GTPBP3Q969Y2 492 aaKnown RBP15.3■□□□□ 0.04
PRKN-209ENST00000612485 AURKBQ96GD4 344 aaPredicted RBP15.3■□□□□ 0.04
PRKN-209ENST00000612485 RADILQ96JH8 1075 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 TRIM2Q9C040 744 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 UPB1Q9UBR1 384 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 IFT52Q9Y366 437 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 PCDHB14Q9Y5E9 798 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 FLVCR1Q9Y5Y0 555 aa15.3■□□□□ 0.04
PRKN-209ENST00000612485 USF3Q68DE3 2245 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 OVOL3O00110 214 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 NCF2P19878 526 aaPredicted RBP15.29■□□□□ 0.04
PRKN-209ENST00000612485 NTF4P34130 210 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 ACAA2P42765 397 aaKnown RBP15.29■□□□□ 0.04
PRKN-209ENST00000612485 FADDQ13158 208 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 CEACAM7Q14002 265 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 SLC17A1Q14916 467 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 RGNQ15493 299 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 ETFDHQ16134 617 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 RPS26P11Q5JNZ5 115 aaPredicted RBP15.29■□□□□ 0.04
PRKN-209ENST00000612485 OTUD3Q5T2D3 398 aaPredicted RBP15.29■□□□□ 0.04
PRKN-209ENST00000612485 PRAMEF8Q5VWM4 474 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 PRAMEF7Q5VXH5 474 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 SLC2A7Q6PXP3 512 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 KLHL17Q6TDP4 642 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 TMEM108Q6UXF1 575 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 SF3B5Q9BWJ5 86 aaKnown RBP15.29■□□□□ 0.04
PRKN-209ENST00000612485 SPATA9Q9BWV2 254 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 TAPBPLQ9BX59 468 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 PAIP1Q9H074 479 aaKnown RBP15.29■□□□□ 0.04
PRKN-209ENST00000612485 ALG2Q9H553 416 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 TCF7L2Q9NQB0 619 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 FAIMQ9NVQ4 179 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 CISD1Q9NZ45 108 aaKnown RBP15.29■□□□□ 0.04
PRKN-209ENST00000612485 NPAP1Q9NZP6 1156 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 MGAT4BQ9UQ53 548 aa15.29■□□□□ 0.04
PRKN-209ENST00000612485 MAGED1Q9Y5V3 778 aaPredicted RBP15.29■□□□□ 0.04
PRKN-209ENST00000612485 NAV3Q8IVL0 2385 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 A0A096LPI6 279 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 LIPT2A6NK58 231 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 A8MVM7 634 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 SHISA9B4DS77 424 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 CLIC1O00299 241 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 ABCD4O14678 606 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 CDH11P55287 796 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 OR7A5Q15622 319 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 GABRA6Q16445 453 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 ZNF311Q5JNZ3 666 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 CLIP4Q8N3C7 705 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 GOLGA6L1Q8N7Z2 621 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 OR52E4Q8NGH9 312 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 OR52N5Q8NH56 324 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 BBS10Q8TAM1 723 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 TMEM45BQ96B21 275 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 MUS81Q96NY9 551 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 CCDC28BQ9BUN5 200 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 PIF1Q9H611 641 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 BCL2L10Q9HD36 194 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 A4GALTQ9NPC4 353 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 DCTN4Q9UJW0 460 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 SLC25A15Q9Y619 301 aa15.28■□□□□ 0.04
PRKN-209ENST00000612485 AQP7P3A6NL99 342 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 C5orf58C9J3I9 102 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 PDLIM1O00151 329 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 AKR7A3O95154 331 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 ITGA5P08648 1049 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 BMP2P12643 396 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 H2AFXP16104 143 aaPredicted RBP15.27■□□□□ 0.04
PRKN-209ENST00000612485 PTAFRP25105 342 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 IDH3AP50213 366 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 TGFBR3Q03167 851 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 CLEC12BQ2HXU8 276 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 PGGHGQ32M88 737 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 PIAS4Q8N2W9 510 aaPredicted RBP15.27■□□□□ 0.04
PRKN-209ENST00000612485 C17orf78Q8N4C9 275 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 TMEM99Q8N816 258 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 C1orf162Q8NEQ5 155 aaPredicted RBP15.27■□□□□ 0.04
PRKN-209ENST00000612485 OR9K2Q8NGE7 335 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 SLC35B4Q969S0 331 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 GRIP2Q9C0E4 1043 aa15.27■□□□□ 0.04
PRKN-209ENST00000612485 ARGLU1Q9NWB6 273 aaPredicted RBP15.27■□□□□ 0.04
PRKN-209ENST00000612485 VAMP5O95183 116 aa15.26■□□□□ 0.03
PRKN-209ENST00000612485 NUDT7P0C024 238 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms