RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 FABP12A6NFH5 140 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 SPNP16150 400 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 MST1P26927 711 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 FOXL2P58012 376 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 PRPS1P60891 318 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 ERVK-25P63136 954 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 ACTC1P68032 377 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 ACTA1P68133 377 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 CD300CQ08708 224 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 LYSMD4Q5XG99 296 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 RPTNQ6XPR3 784 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 LANCL3Q6ZV70 420 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 SSX6Q7RTT6 188 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 TMPRSS9Q7Z410 1059 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 OIT3Q8WWZ8 545 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 LRFN5Q96NI6 719 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 KLHDC3Q9BQ90 382 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 RTN4RQ9BZR6 473 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 TIGARQ9NQ88 270 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 NANSQ9NR45 359 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 FER1L5A0AVI2 2057 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 WDR87Q6ZQQ6 2873 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 CACNA1EQ15878 2313 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 CPED1A4D0V7 1026 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 IMPA2O14732 288 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 HCRTR2O43614 444 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 NAA10P41227 235 aaPredicted RBP12.44□□□□□ -0.42
NEK3-205ENST00000610828 DCAF7P61962 342 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 RPS4XP62701 263 aaKnown RBP12.44□□□□□ -0.42
NEK3-205ENST00000610828 E2F1Q01094 437 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 SLC3A1Q07837 685 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 PLCXD2Q0VAA5 305 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 MADCAM1Q13477 382 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 BAK1Q16611 211 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 SLC29A4Q7RTT9 530 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 RFLNBQ8N5W9 214 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 OR1N1Q8NGS0 311 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 MOSPD2Q8NHP6 518 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 ZNF524Q96C55 264 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 RASD2Q96D21 266 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 MOGAT1Q96PD6 335 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 CCNL2Q96S94 520 aaPredicted RBP12.44□□□□□ -0.42
NEK3-205ENST00000610828 SRRQ9GZT4 340 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 WWTR1Q9GZV5 400 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 NRIP3Q9NQ35 241 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 NUP210LQ5VU65 1888 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 WDFY3Q8IZQ1 3526 aa12.44□□□□□ -0.42
NEK3-205ENST00000610828 APOA1P02647 267 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 PYCR1P32322 319 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 AQP2P41181 271 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 ZNF117Q03924 483 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 PON3Q15166 354 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 GDPD3Q7L5L3 318 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 VASH1Q7L8A9 365 aaPredicted RBP12.43□□□□□ -0.42
NEK3-205ENST00000610828 GALNT6Q8NCL4 622 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 NPEPL1Q8NDH3 523 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 CNN2Q99439 309 aaKnown RBP12.43□□□□□ -0.42
NEK3-205ENST00000610828 FRYLO94915 3013 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 A0A1W2PPC1 479 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 OR6C68A6NDL8 312 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 C17orf51A8MQB3 221 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 PLPP2O43688 288 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 TMCC2O75069 709 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 NUDT14O95848 222 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 TFP02787 698 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 GALP22466 123 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 ITPKBP27987 946 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 TACR3P29371 465 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 ACVR1BP36896 505 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 TAS2R43P59537 309 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 EGR4Q05215 589 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 LGALS3BPQ08380 585 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 ZNF74Q16587 644 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 GLYR1Q49A26 553 aaPredicted RBP12.43□□□□□ -0.42
NEK3-205ENST00000610828 YOD1Q5VVQ6 348 aaPredicted RBP12.43□□□□□ -0.42
NEK3-205ENST00000610828 GUSBP11Q6P575 273 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 TMEM71Q6P5X7 295 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 POMZP3Q6PJE2 187 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 CCBE1Q6UXH8 406 aaPredicted RBP12.43□□□□□ -0.42
NEK3-205ENST00000610828 MARCH3Q86UD3 253 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 C17orf47Q8NEP4 570 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 OR6K6Q8NGW6 343 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 OR5J2Q8NH18 312 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 ZPLD1Q8TCW7 415 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 ZNRF4Q8WWF5 429 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 TMCO6Q96DC7 493 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 DEPDC7Q96QD5 511 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 TMEM43Q9BTV4 400 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 FSCN3Q9NQT6 498 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 PRDM6Q9NQX0 595 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 TBC1D24Q9ULP9 559 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 GRIP1Q9Y3R0 1128 aa12.43□□□□□ -0.42
NEK3-205ENST00000610828 TEX13CA0A0J9YWL9 993 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 ARPC3O15145 178 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 MAGEB4O15481 346 aaPredicted RBP12.42□□□□□ -0.42
NEK3-205ENST00000610828 NDUFB5O43674 189 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 SSX4O60224 188 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 GAAP10253 952 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 IL7P13232 177 aa12.42□□□□□ -0.42
NEK3-205ENST00000610828 F8A1P23610 371 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms