RNA–Protein interactions for RNA: ENST00000610756.4

TCF3-219, Transcript of transcription factor 3, humanhuman

TSL 1 (best)

Gene TCF3, Length 1,343 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-219ENST00000610756 CGB2Q6NT52 195 aa17.08■□□□□ 0.32
TCF3-219ENST00000610756 ATG4DQ86TL0 474 aaPredicted RBP17.08■□□□□ 0.32
TCF3-219ENST00000610756 BHLHE22Q8NFJ8 381 aaPredicted RBP17.08■□□□□ 0.32
TCF3-219ENST00000610756 KISS1RQ969F8 398 aaPredicted RBP17.08■□□□□ 0.32
TCF3-219ENST00000610756 ALPK1Q96QP1 1244 aa17.08■□□□□ 0.32
TCF3-219ENST00000610756 KAT8Q9H7Z6 458 aaKnown RBP17.08■□□□□ 0.32
TCF3-219ENST00000610756 ATP8B1O43520 1251 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 FRS3O43559 492 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 TPST1O60507 370 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 IL32P24001 234 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 EDNRAP25101 427 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 HOXC5Q00444 222 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 BNIP2Q12982 314 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 NFYCQ13952 458 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 SLC17A1Q14916 467 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 FBXW9Q5XUX1 488 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 PTOV1Q86YD1 416 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 C11orf65Q8NCR3 313 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 STK35Q8TDR2 534 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 EVA1AQ9H8M9 152 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 C12orf10Q9HB07 376 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 PARPBPQ9NWS1 579 aa17.07■□□□□ 0.32
TCF3-219ENST00000610756 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.06■□□□□ 0.32
TCF3-219ENST00000610756 TMEM229AB2RXF0 380 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 FBP2O00757 339 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 MRPL33O75394 65 aaKnown RBP17.06■□□□□ 0.32
TCF3-219ENST00000610756 MFN2O95140 757 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 CD53P19397 219 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 ADSLP30566 484 aaPredicted RBP17.06■□□□□ 0.32
TCF3-219ENST00000610756 NR1H2P55055 460 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 PCBP3P57721 371 aaKnown RBP17.06■□□□□ 0.32
TCF3-219ENST00000610756 MTPNP58546 118 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 CYLC2Q14093 348 aaPredicted RBP17.06■□□□□ 0.32
TCF3-219ENST00000610756 SELPLGQ14242 412 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 TSC22D1Q15714 1073 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 DEFB113Q30KQ7 82 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 C1orf140Q5VVS0 124 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 BHLHA15Q7RTS1 189 aaPredicted RBP17.06■□□□□ 0.32
TCF3-219ENST00000610756 NET1Q7Z628 596 aaPredicted RBP17.06■□□□□ 0.32
TCF3-219ENST00000610756 ARMC8Q8IUR7 673 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 APH1AQ96BI3 265 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 HS3ST6Q96QI5 342 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 SF3B5Q9BWJ5 86 aaKnown RBP17.06■□□□□ 0.32
TCF3-219ENST00000610756 TRIM2Q9C040 744 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 PIF1Q9H611 641 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 SAR1AQ9NR31 198 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 FLVCR1Q9Y5Y0 555 aa17.06■□□□□ 0.32
TCF3-219ENST00000610756 NPPAP01160 153 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 COX5AP20674 150 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 MDH1P40925 334 aaKnown RBP17.05■□□□□ 0.32
TCF3-219ENST00000610756 KLF10Q13118 480 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 OR7A5Q15622 319 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 TAB1Q15750 504 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 ACKR1Q16570 336 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 CYP51A1Q16850 503 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 GLIPR1L2Q4G1C9 344 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 COQ5Q5HYK3 327 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 OTUD3Q5T2D3 398 aaPredicted RBP17.05■□□□□ 0.32
TCF3-219ENST00000610756 NANOGP8Q6NSW7 305 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 C6orf89Q6UWU4 347 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 ZC3HAV1Q7Z2W4 902 aaKnown RBP17.05■□□□□ 0.32
TCF3-219ENST00000610756 COMTD1Q86VU5 262 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 P2RY8Q86VZ1 359 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 WFDC8Q8IUA0 241 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 TMEM99Q8N816 258 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 DNAJA4Q8WW22 397 aaPredicted RBP17.05■□□□□ 0.32
TCF3-219ENST00000610756 TAPBPLQ9BX59 468 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 NANOGQ9H9S0 305 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 NGBQ9NPG2 151 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 RPS6KB2Q9UBS0 482 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 ANGPT4Q9Y264 503 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 F8P00451 2351 aa17.05■□□□□ 0.32
TCF3-219ENST00000610756 TEP1Q99973 2627 aaKnown RBP17.05■□□□□ 0.32
TCF3-219ENST00000610756 ITPR3Q14573 2671 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 AQP7P3A6NL99 342 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 M0QX08 132 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 LYZL6O75951 148 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 AKR7A3O95154 331 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 VAMP5O95183 116 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 IGHV1-2P23083 117 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 AQP1P29972 269 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 EGR4Q05215 589 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 DMTNQ08495 405 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 TMEM225Q6GV28 225 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 SSX8Q7RTT4 187 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 LSRQ86X29 649 aaPredicted RBP17.04■□□□□ 0.32
TCF3-219ENST00000610756 SLC30A8Q8IWU4 369 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 UBE2J2Q8N2K1 259 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 ZNF433Q8N7K0 673 aaPredicted RBP17.04■□□□□ 0.32
TCF3-219ENST00000610756 OR52E4Q8NGH9 312 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 MFSD8Q8NHS3 518 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 PLPPR2Q96GM1 343 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 SH3GL1Q99961 368 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 TMEM204Q9BSN7 226 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 ASB6Q9NWX5 421 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 KLHL14Q9P2G3 628 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 SLC9A8Q9Y2E8 581 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 FREM1Q5H8C1 2179 aa17.04■□□□□ 0.32
TCF3-219ENST00000610756 PRRC2AP48634 2157 aaKnown RBP17.04■□□□□ 0.32
TCF3-219ENST00000610756 VPS13CQ709C8 3753 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms