RNA–Protein interactions for RNA: ENST00000608988.5

SHANK2-220, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 1,879 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-220ENST00000608988 CD99L2Q8TCZ2 262 aa20.6■□□□□ 0.89
SHANK2-220ENST00000608988 PNPLA2Q96AD5 504 aa20.6■□□□□ 0.89
SHANK2-220ENST00000608988 ARMC5Q96C12 935 aa20.6■□□□□ 0.89
SHANK2-220ENST00000608988 C6orf106Q9H6K1 298 aaPredicted RBP20.6■□□□□ 0.89
SHANK2-220ENST00000608988 LDAHQ9H6V9 325 aa20.6■□□□□ 0.89
SHANK2-220ENST00000608988 FOXJ3Q9UPW0 622 aa20.6■□□□□ 0.89
SHANK2-220ENST00000608988 A0A087WV62 115 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 CENPVL1A0A0U1RR11 272 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 PRRT4C9JH25 899 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 FGF2P09038 288 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 PTNP21246 168 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 SCAND1P57086 179 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 RPS15AP62244 130 aaKnown RBP20.59■□□□□ 0.89
SHANK2-220ENST00000608988 RPE65Q16518 533 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 TMEM255AQ5JRV8 349 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 FHL5Q5TD97 284 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 CDRT4Q8N9R6 151 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 CYB561A3Q8NBI2 242 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 ZBTB44Q8NCP5 570 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 PELOQ9BRX2 385 aaKnown RBP20.59■□□□□ 0.89
SHANK2-220ENST00000608988 ZNF426Q9BUY5 554 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 B3GNT4Q9C0J1 378 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 CDCP1Q9H5V8 836 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 NOX4Q9NPH5 578 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 MEPEQ9NQ76 525 aaPredicted RBP20.59■□□□□ 0.89
SHANK2-220ENST00000608988 MED11Q9P086 117 aa20.59■□□□□ 0.89
SHANK2-220ENST00000608988 TRAV27A0A087WT01 109 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 A0A0B4J2E0 115 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 A0A1B0GW55 424 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 A0A1B0GX12 115 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 UBE2QL1A1L167 161 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 SUSD5O60279 629 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 GKN3PP0CG01 181 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 DUX4L2P0CJ85 424 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 DUX4L3P0CJ86 424 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 DUX4L4P0CJ87 422 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 DUX4L5P0CJ88 424 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 DUX4L6P0CJ89 424 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 DUX4L7P0CJ90 424 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 HOXB3P14651 431 aaPredicted RBP20.58■□□□□ 0.89
SHANK2-220ENST00000608988 TLX1P31314 330 aaPredicted RBP20.58■□□□□ 0.89
SHANK2-220ENST00000608988 ZNF273Q14593 569 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 SYT9Q86SS6 491 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 OR51A7Q8NH64 312 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 HAVCR1Q96D42 359 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 SGTBQ96EQ0 304 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 DERL3Q96Q80 235 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 SERINC2Q96SA4 455 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 MCCC2Q9HCC0 563 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 NCDNQ9UBB6 729 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 DUX4Q9UBX2 424 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 CHRNA9Q9UGM1 479 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 ZNF281Q9Y2X9 895 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 V9GY05 133 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 MYO10Q9HD67 2058 aa20.58■□□□□ 0.89
SHANK2-220ENST00000608988 A0A1W2PPK0 400 aa20.58■□□□□ 0.88
SHANK2-220ENST00000608988 GXYLT2A0PJZ3 443 aa20.58■□□□□ 0.88
SHANK2-220ENST00000608988 AQP8O94778 261 aa20.58■□□□□ 0.88
SHANK2-220ENST00000608988 DIO1P49895 249 aa20.58■□□□□ 0.88
SHANK2-220ENST00000608988 P2RX1P51575 399 aa20.58■□□□□ 0.88
SHANK2-220ENST00000608988 DEFB103AP81534 67 aa20.58■□□□□ 0.88
SHANK2-220ENST00000608988 MPPED2Q15777 294 aa20.58■□□□□ 0.88
SHANK2-220ENST00000608988 TMEM69Q5SWH9 247 aa20.58■□□□□ 0.88
SHANK2-220ENST00000608988 DNAAF1Q8NEP3 725 aa20.58■□□□□ 0.88
SHANK2-220ENST00000608988 VWCEQ96DN2 955 aa20.58■□□□□ 0.88
SHANK2-220ENST00000608988 GFI1Q99684 422 aa20.58■□□□□ 0.88
SHANK2-220ENST00000608988 PHPT1Q9NRX4 125 aaPredicted RBP20.58■□□□□ 0.88
SHANK2-220ENST00000608988 CA10Q9NS85 328 aa20.58■□□□□ 0.88
SHANK2-220ENST00000608988 MRPL15Q9P015 296 aaKnown RBP20.58■□□□□ 0.88
SHANK2-220ENST00000608988 GNG8Q9UK08 70 aa20.58■□□□□ 0.88
SHANK2-220ENST00000608988 IGLON5A6NGN9 336 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 PRR19A6NJB7 356 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 A8MUA0 341 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 ATP6V1G2-DDX39BF2Z307 99 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 GUSBP08236 651 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 ADRB1P08588 477 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 CPMP14384 443 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 STX4Q12846 297 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 BTN1A1Q13410 526 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 PON3Q15166 354 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 TUSC1Q2TAM9 212 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 PLPP4Q5VZY2 271 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 FCRLBQ6BAA4 426 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 MTFR2Q6P444 385 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 TMUB2Q71RG4 321 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 PAQR7Q86WK9 346 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 SLC35F3Q8IY50 421 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 COX18Q8N8Q8 333 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 MIB2Q96AX9 1013 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 ZMYND19Q96E35 227 aaPredicted RBP20.57■□□□□ 0.88
SHANK2-220ENST00000608988 RBM18Q96H35 190 aaKnown RBP20.57■□□□□ 0.88
SHANK2-220ENST00000608988 TNFRSF13CQ96RJ3 184 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 SLITRK2Q9H156 845 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 FBXL4Q9UKA2 621 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 HEBP2Q9Y5Z4 205 aa20.57■□□□□ 0.88
SHANK2-220ENST00000608988 NDUFB2O95178 105 aa20.56■□□□□ 0.88
SHANK2-220ENST00000608988 PEBP1P30086 187 aaKnown RBP20.56■□□□□ 0.88
SHANK2-220ENST00000608988 ART1P52961 327 aa20.56■□□□□ 0.88
SHANK2-220ENST00000608988 GK2Q14410 553 aaPredicted RBP20.56■□□□□ 0.88
SHANK2-220ENST00000608988 ZNF234Q14588 700 aa20.56■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 148.3 ms