RNA–Protein interactions for RNA: ENST00000608621.5

POLR2J3-219, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 4

Gene POLR2J3, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-219ENST00000608621 SLC17A1Q14916 467 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 TMEM249Q2WGJ8 235 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 KRT71Q3SY84 523 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 ELOA3BQ3SY89 546 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 C6orf52Q5T4I8 152 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 ZNF544Q6NX49 715 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 ZNF621Q6ZSS3 439 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 CMIPQ8IY22 773 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 ZNF525Q8N782 197 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 ELOA3Q8NG57 546 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 WDR60Q8WVS4 1066 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 PANX1Q96RD7 426 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 AMBRA1Q9C0C7 1298 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 ADAM19Q9H013 955 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 HAO1Q9UJM8 370 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 DCTN4Q9UJW0 460 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 SLC9A8Q9Y2E8 581 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 AMDHD2Q9Y303 409 aa11.73□□□□□ -0.53
POLR2J3-219ENST00000608621 STAB1Q9NY15 2570 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 CFAP73A6NFT4 308 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 H7C417 338 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 FAAHO00519 579 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 RGS16O15492 202 aaPredicted RBP11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 SNUPNO95149 360 aaKnown RBP11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 GSNP06396 782 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 ALDOCP09972 364 aaKnown RBP11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 NR2F1P10589 423 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 SLC25A16P16260 332 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 IL12AP29459 219 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 CDKN2CP42773 168 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 ANXA11P50995 505 aaKnown RBP11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 MAP2K6P52564 334 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 SLC25A3Q00325 362 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 TGFBR3Q03167 851 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 CHRNB3Q05901 458 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 EPS8Q12929 822 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 STX3Q13277 289 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 CEACAM7Q14002 265 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 MPP2Q14168 576 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 GNA13Q14344 377 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 COX20Q5RI15 118 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 OTUD3Q5T2D3 398 aaPredicted RBP11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 MRPL2Q5T653 305 aaKnown RBP11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 PAQR6Q6TCH4 344 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 PHC2Q8IXK0 858 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 LRRC34Q8IZ02 419 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 C17orf78Q8N4C9 275 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 TRIML2Q8N7C3 387 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 TMEM99Q8N816 258 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 ZIC4Q8N9L1 334 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 NANOS1Q8WY41 292 aaKnown RBP11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 FAM168AQ92567 244 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 OR52E6Q96RD3 313 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 KCNK17Q96T54 332 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 FKRPQ9H9S5 495 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 MEAF6Q9HAF1 191 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 SSU72Q9NP77 194 aaKnown RBP11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 PMF1-BGLAPU3KQ54 211 aa11.72□□□□□ -0.53
POLR2J3-219ENST00000608621 TM9SF1O15321 606 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 AKR7A3O95154 331 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 PGRP06401 933 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 GPIP06744 558 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 DBIP07108 87 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 GKN3PP0CG01 181 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 BMP4P12644 408 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 CDH2P19022 906 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 RPS4Y1P22090 263 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 CXCR1P25024 350 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 MPGP29372 298 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 EFNA4P52798 201 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 PRPS1P60891 318 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 VLDLRP98155 873 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 OR7A5Q15622 319 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 GSTA3Q16772 222 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 OGFOD2Q6N063 350 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 WDR93Q6P2C0 686 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 AAED1Q7RTV5 226 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 KIRREL3Q8IZU9 778 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 C1orf162Q8NEQ5 155 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 PNPT1Q8TCS8 783 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 C10orf105Q8TEF2 133 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 TMEM45BQ96B21 275 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 ZBTB9Q96C00 473 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 AURKBQ96GD4 344 aaPredicted RBP11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 ZNF385AQ96PM9 386 aaKnown RBP11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 MANSC1Q9H8J5 431 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 KCNK9Q9NPC2 374 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 AIG1Q9NVV5 245 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 RLIMQ9NVW2 624 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 MOKQ9UQ07 419 aa11.71□□□□□ -0.53
POLR2J3-219ENST00000608621 LIPT2A6NK58 231 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 SDHDO14521 159 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 KLF11O14901 512 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 LY6HO94772 140 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 WNT11O96014 354 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 UQCRBP14927 111 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 ACAA2P42765 397 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 TXNL4AP83876 142 aaKnown RBP11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 BST1Q10588 318 aa11.7□□□□□ -0.54
POLR2J3-219ENST00000608621 BNIP2Q12982 314 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms