RNA–Protein interactions for RNA: ENST00000602716.5

PPFIA3-207, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 2,020 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-207ENST00000602716 KIR3DP1A8MWS1 328 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 CHP2O43745 196 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 SOX14O95416 240 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 DBTP11182 482 aaKnown RBP15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 FUT1P19526 365 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 CASP3P42574 277 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 GPR4P46093 362 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 RGS6P49758 472 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 CDC20Q12834 499 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 PTGES3Q15185 160 aaKnown RBP15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 ZSWIM7Q19AV6 140 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 ARMCX4Q5H9R4 360 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 OPN5Q6U736 354 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 ZNF227Q86WZ6 799 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 LYSMD2Q8IV50 215 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 TMEM156Q8N614 296 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 ACOT11Q8WXI4 607 aaPredicted RBP15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 NR4A3Q92570 626 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 FAM46AQ96IP4 442 aaKnown RBP15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 CDADC1Q9BWV3 514 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 TRIM2Q9C040 744 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 OR51E2Q9H255 320 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 ANKRD19PQ9H560 264 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 PROK2Q9HC23 129 aa15.77■□□□□ 0.12
PPFIA3-207ENST00000602716 ZAR1LA6NP61 321 aa15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 CDC40O60508 579 aaKnown RBP eCLIP15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 ITPKBP27987 946 aa15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 OMPP47874 163 aa15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 EIF2B2P49770 351 aaKnown RBP15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 CDC42P60953 191 aa15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 ZNF181Q2M3W8 571 aa15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 ZNF367Q7RTV3 350 aa15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 ZNF440Q8IYI8 595 aa15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 C9orf43Q8TAL5 461 aaPredicted RBP15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 CDCA4Q9BXL8 241 aa15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 POLR2J2Q9GZM3 115 aaKnown RBP15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 POLR2J3Q9H1A7 115 aaKnown RBP15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 EVA1AQ9H8M9 152 aa15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 SP140LQ9H930 580 aa15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 MEPEQ9NQ76 525 aaPredicted RBP15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 MED11Q9P086 117 aa15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 WIF1Q9Y5W5 379 aa15.77■□□□□ 0.11
PPFIA3-207ENST00000602716 LOC100506127A0A0U1RQW1 187 aa15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 SH3D21A4FU49 640 aa15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 EFCAB10A6NFE3 127 aa15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 TP53P04637 393 aaPredicted RBP15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 SOWAHCQ53LP3 525 aaPredicted RBP15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 OR5W2Q8NH69 310 aa15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 ZNF426Q9BUY5 554 aa15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 C6orf62Q9GZU0 229 aaPredicted RBP15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 RNF167Q9H6Y7 350 aa15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 ATP13A2Q9NQ11 1180 aa15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 ABCB10Q9NRK6 738 aa15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 HPF1Q9NWY4 346 aa15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 CNOT2Q9NZN8 540 aaKnown RBP15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 REV1Q9UBZ9 1251 aa15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 UGT2A1Q9Y4X1 527 aa15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 CFAP47Q6ZTR5 3102 aa15.76■□□□□ 0.11
PPFIA3-207ENST00000602716 CDC42EP2O14613 210 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 EFSO43281 561 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 MPZL2O60487 215 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 EIF4E2O60573 245 aaKnown RBP15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 NUDT14O95848 222 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 ADAP00813 363 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 ADRA2AP08913 450 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 CHMP24386 653 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 CRISP1P54107 249 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 AIMP2Q13155 320 aaKnown RBP15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 C19orf48Q6RUI8 117 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 ARSKQ6UWY0 536 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 MBOAT2Q6ZWT7 520 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 TMEM239Q8WW34 195 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 RELTQ969Z4 430 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 CENPOQ9BU64 300 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 CPNE5Q9HCH3 593 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 TAS2R16Q9NYV7 291 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 RPS6KB2Q9UBS0 482 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 FBXL2Q9UKC9 423 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 FRYQ5TBA9 3013 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 IGKV1D-42A0A075B6H8 117 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 A6NL46 340 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 MAKP20794 623 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 IFNA8P32881 189 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 P2RX1P51575 399 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 PRKCDQ05655 676 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 QPRTQ15274 297 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 WBP2NLQ6ICG8 309 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 C1orf94Q6P1W5 598 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 ATG4DQ86TL0 474 aaPredicted RBP15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 KIF18BQ86Y91 864 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 CYP4Z2PQ8N1L4 340 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 GPR119Q8TDV5 335 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 PAQR8Q8TEZ7 354 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 IP6K3Q96PC2 410 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 PPP4R1LQ9P1A2 415 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 MGAT4BQ9UQ53 548 aa15.75■□□□□ 0.11
PPFIA3-207ENST00000602716 SHISA8B8ZZ34 492 aa15.74■□□□□ 0.11
PPFIA3-207ENST00000602716 KLF4O43474 513 aa15.74■□□□□ 0.11
PPFIA3-207ENST00000602716 TCEA1P23193 301 aaKnown RBP15.74■□□□□ 0.11
PPFIA3-207ENST00000602716 COPZ1P61923 177 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms