RNA–Protein interactions for RNA: ENST00000601801.2

NEAT1-203, nuclear paraspeckle assembly transcript 1, humanhuman

TSL 4 BASIC

Gene NEAT1, Length 487 nt, Biotype lincRNA, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEAT1-203ENST00000601801 TPT1P8Q9HAU6 139 aa12.81□□□□□ -0.36
NEAT1-203ENST00000601801 VCX3AQ9NNX9 186 aa12.81□□□□□ -0.36
NEAT1-203ENST00000601801 ZCCHC3Q9NUD5 404 aaKnown RBP12.81□□□□□ -0.36
NEAT1-203ENST00000601801 PAQR5Q9NXK6 330 aaPredicted RBP12.81□□□□□ -0.36
NEAT1-203ENST00000601801 EMC9Q9Y3B6 208 aa12.81□□□□□ -0.36
NEAT1-203ENST00000601801 SCDO00767 359 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 AQP8O94778 261 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 PRKD3O94806 890 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 CPSF4O95639 269 aaKnown RBP12.8□□□□□ -0.36
NEAT1-203ENST00000601801 SERPINA1P01009 418 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 CDH2P19022 906 aaPredicted RBP12.8□□□□□ -0.36
NEAT1-203ENST00000601801 EFNA1P20827 205 aaPredicted RBP12.8□□□□□ -0.36
NEAT1-203ENST00000601801 CRYGSP22914 178 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 TTKP33981 857 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 CTBP2P56545 445 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 POU6F2P78424 691 aaPredicted RBP12.8□□□□□ -0.36
NEAT1-203ENST00000601801 NKX6-1P78426 367 aaPredicted RBP12.8□□□□□ -0.36
NEAT1-203ENST00000601801 APOFQ13790 326 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 MLC1Q15049 377 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 GUSBP1Q15486 140 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 RNF220Q5VTB9 566 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 ANKRD46Q86W74 232 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 KRTAP1-3Q8IUG1 177 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 MISPQ8IVT2 679 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 GTPBP8Q8N3Z3 284 aaPredicted RBP12.8□□□□□ -0.36
NEAT1-203ENST00000601801 SPATA3Q8NHX4 192 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 NUDT8Q8WV74 236 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 CYGBQ8WWM9 190 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 NANOS1Q8WY41 292 aaKnown RBP12.8□□□□□ -0.36
NEAT1-203ENST00000601801 NRBF2Q96F24 287 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 PIK3IP1Q96FE7 263 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 C16orf58Q96GQ5 468 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 GMPPAQ96IJ6 420 aaPredicted RBP12.8□□□□□ -0.36
NEAT1-203ENST00000601801 REPIN1Q9BWE0 567 aaKnown RBP12.8□□□□□ -0.36
NEAT1-203ENST00000601801 ADPRHL2Q9NX46 363 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 MCTS1Q9ULC4 181 aaKnown RBP12.8□□□□□ -0.36
NEAT1-203ENST00000601801 COMMD3-BMI1R4GMX3 469 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 CSPG4Q6UVK1 2322 aa12.8□□□□□ -0.36
NEAT1-203ENST00000601801 A0A1W2PQD3 144 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 A0A1W2PRB8 838 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 DEFB108AA8MXU0 73 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 PDLIM1O00151 329 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 ARHGEF9O43307 516 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 AHCYL1O43865 530 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 E2F6O75461 281 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 SYNGR4O95473 234 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 HMGN2P05204 90 aaKnown RBP12.79□□□□□ -0.36
NEAT1-203ENST00000601801 GSNP06396 782 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 SMIM18P0DKX4 95 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 THRBP10828 461 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 LAMP1P11279 417 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 CCKARP32238 428 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 KDELR2P33947 212 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 PCGF2P35227 344 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 MAGEA2P43356 314 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 RAC1P63000 192 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 TOP3AQ13472 1001 aaPredicted RBP12.79□□□□□ -0.36
NEAT1-203ENST00000601801 IL18R1Q13478 541 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 GK3PQ14409 553 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 EXOC3L2Q2M3D2 409 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 PLPPR5Q32ZL2 321 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 GTDC1Q4AE62 458 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 CCNJQ5T5M9 372 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 SHEQ5VZ18 495 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 ESPNLQ6ZVH7 1005 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 EIF3MQ7L2H7 374 aaKnown RBP12.79□□□□□ -0.36
NEAT1-203ENST00000601801 ZNF550Q7Z398 422 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 ZAR1Q86SH2 424 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 STK32CQ86UX6 486 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 C11orf65Q8NCR3 313 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 OR4A15Q8NGL6 344 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 OR6K3Q8NGY3 331 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 OR10D3Q8NH80 312 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 PIGTQ969N2 578 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 OTUB1Q96FW1 271 aaPredicted RBP12.79□□□□□ -0.36
NEAT1-203ENST00000601801 ZC3HAV1LQ96H79 300 aaKnown RBP12.79□□□□□ -0.36
NEAT1-203ENST00000601801 SH3YL1Q96HL8 342 aaPredicted RBP12.79□□□□□ -0.36
NEAT1-203ENST00000601801 STACQ99469 402 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 BTBD2Q9BX70 525 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 YIPF3Q9GZM5 350 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 IKZF5Q9H5V7 419 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 PLSCR4Q9NRQ2 329 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 DUSP22Q9NRW4 184 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 MED17Q9NVC6 651 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 FBXO34Q9NWN3 711 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 USP22Q9UPT9 525 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 SNX8Q9Y5X2 465 aa12.79□□□□□ -0.36
NEAT1-203ENST00000601801 FAM171A2A8MVW0 826 aa12.78□□□□□ -0.36
NEAT1-203ENST00000601801 SIAH2O43255 324 aa12.78□□□□□ -0.36
NEAT1-203ENST00000601801 SMPD2O60906 423 aa12.78□□□□□ -0.36
NEAT1-203ENST00000601801 OPN1LWP04000 364 aa12.78□□□□□ -0.36
NEAT1-203ENST00000601801 FESP07332 822 aa12.78□□□□□ -0.36
NEAT1-203ENST00000601801 FPR1P21462 350 aa12.78□□□□□ -0.36
NEAT1-203ENST00000601801 CDKN2CP42773 168 aa12.78□□□□□ -0.36
NEAT1-203ENST00000601801 MAGEA8P43361 318 aa12.78□□□□□ -0.36
NEAT1-203ENST00000601801 SLC6A8P48029 635 aa12.78□□□□□ -0.36
NEAT1-203ENST00000601801 LASP1Q14847 261 aaKnown RBP12.78□□□□□ -0.36
NEAT1-203ENST00000601801 CTU2Q2VPK5 515 aaKnown RBP12.78□□□□□ -0.36
NEAT1-203ENST00000601801 EXOSC6Q5RKV6 272 aaKnown RBP12.78□□□□□ -0.36
NEAT1-203ENST00000601801 PDSS1Q5T2R2 415 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms