RNA–Protein interactions for RNA: ENST00000600948.5

PLD3-223, Transcript of phospholipase D family member 3, human

TSL 2

Gene PLD3, Length 536 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PLD3-223	ENST00000600948	MED4	Q9NPJ6	270 aa		13.71	□□□□□ -0.21
PLD3-223	ENST00000600948	CAD	P27708	2225 aa		13.71	□□□□□ -0.22
PLD3-223	ENST00000600948	MBD3L2B	A0A1B0GVZ6	204 aa	Predicted RBP	13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	LIPT2	A6NK58	231 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948		A8MVM7	634 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	FBP2	O00757	339 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	GPR171	O14626	319 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	NPIPB7	O75200	414 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	VIM	P08670	466 aa	Known RBP	13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	CD53	P19397	219 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	IL32	P24001	234 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	NTF4	P34130	210 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	ARFIP2	P53365	341 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	SF3A3	Q12874	501 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	ITGAD	Q13349	1161 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	NFYC	Q13952	458 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	CEACAM7	Q14002	265 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	KEAP1	Q14145	624 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	HSP90B2P	Q58FF3	399 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	BEX5	Q5H9J7	111 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	PAQR6	Q6TCH4	344 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	WFDC8	Q8IUA0	241 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	ZNF100	Q8IYN0	542 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	KISS1R	Q969F8	398 aa	Predicted RBP	13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	NAA11	Q9BSU3	229 aa	Predicted RBP	13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	ANGPT4	Q9Y264	503 aa		13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	NOSIP	Q9Y314	301 aa	Known RBP	13.7	□□□□□ -0.22
PLD3-223	ENST00000600948	ARID1A	O14497	2285 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	LYZL6	O75951	148 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	CNOT4	O95628	575 aa	Known RBP	13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	GPI	P06744	558 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	COX5A	P20674	150 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	HTR2A	P28223	471 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	AQP1	P29972	269 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	PCBP3	P57721	371 aa	Known RBP	13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	RBBP4	Q09028	425 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	KLF10	Q13118	480 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	SLC17A1	Q14916	467 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	OR7A5	Q15622	319 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	CYP51A1	Q16850	503 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	BHLHA15	Q7RTS1	189 aa	Predicted RBP	13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	NET1	Q7Z628	596 aa	Predicted RBP	13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	TMEM99	Q8N816	258 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	C11orf65	Q8NCR3	313 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	STK35	Q8TDR2	534 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	ALPK1	Q96QP1	1244 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	ZNF607	Q96SK3	696 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	KAT8	Q9H7Z6	458 aa	Known RBP	13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	SAR1A	Q9NR31	198 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	FLVCR1	Q9Y5Y0	555 aa		13.69	□□□□□ -0.22
PLD3-223	ENST00000600948	PRORSD1P	A6NEY8	169 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	AQP7P3	A6NL99	342 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	MFN2	O95140	757 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	AKR7A3	O95154	331 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	IGHV1-2	P23083	117 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	ADSL	P30566	484 aa	Predicted RBP	13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	P2RY4	P51582	365 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	DMTN	Q08495	405 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	CAPRIN1	Q14444	709 aa	Known RBP	13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	TAB1	Q15750	504 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	DEFB113	Q30KQ7	82 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	TRMT5	Q32P41	509 aa	Known RBP	13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	OTUD3	Q5T2D3	398 aa	Predicted RBP	13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	C1orf140	Q5VVS0	124 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	FBXW9	Q5XUX1	488 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	C6orf89	Q6UWU4	347 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	SEZ6L2	Q6UXD5	910 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	LSMEM1	Q8N8F7	131 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	APH1A	Q96BI3	265 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	PLPPR2	Q96GM1	343 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	C12orf10	Q9HB07	376 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948	MRGBP	Q9NV56	204 aa		13.68	□□□□□ -0.22
PLD3-223	ENST00000600948		A0A1B0GWA3	101 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	FXYD1	O00168	92 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	MRPL33	O75394	65 aa	Known RBP	13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	SERPINB7	O75635	380 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	IGHV3-9	P01782	118 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	GZMM	P51124	257 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	NR1H2	P55055	460 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	EGR4	Q05215	589 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	CASP12	Q6UXS9	341 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	ARMC8	Q8IUR7	673 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	ZNF433	Q8N7K0	673 aa	Predicted RBP	13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	BHLHE22	Q8NFJ8	381 aa	Predicted RBP	13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	HSD17B8	Q92506	261 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	ZNF317	Q96PQ6	595 aa	Predicted RBP	13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	USB1	Q9BQ65	265 aa	Known RBP	13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	WFDC6	Q9BQY6	131 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	TMEM204	Q9BSN7	226 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	PTDSS2	Q9BVG9	487 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	PRR14	Q9BWN1	585 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	TAPBPL	Q9BX59	468 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	TRIM2	Q9C040	744 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	UBTD1	Q9HAC8	227 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	KLHL14	Q9P2G3	628 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	RPS6KB2	Q9UBS0	482 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	MALT1	Q9UDY8	824 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	TES	Q9UGI8	421 aa	Known RBP	13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	SLC9A8	Q9Y2E8	581 aa		13.67	□□□□□ -0.22
PLD3-223	ENST00000600948	ELOA3D	A6NLF2	546 aa	Predicted RBP	13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms