RNA–Protein interactions for RNA: ENST00000600137.5

VRK3-219, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 822 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-219ENST00000600137 SLC7A1P30825 629 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 P2RY4P51582 365 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 SMSP52788 366 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 TFF3Q07654 80 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 HSPB2Q16082 182 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 IFI44LQ53G44 452 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 SWT1Q5T5J6 900 aaKnown RBP12.27□□□□□ -0.45
VRK3-219ENST00000600137 C1orf140Q5VVS0 124 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 LCN8Q6JVE9 175 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 CHMP1BQ7LBR1 199 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 P3H2Q8IVL5 708 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 NKAIN4Q8IVV8 208 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 GCNT2Q8N0V5 402 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 RELL2Q8NC24 303 aaPredicted RBP12.27□□□□□ -0.45
VRK3-219ENST00000600137 RNF128Q8TEB7 428 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 LZICQ8WZA0 190 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 TAAR8Q969N4 342 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 CPNE4Q96A23 557 aaPredicted RBP12.27□□□□□ -0.45
VRK3-219ENST00000600137 INTS12Q96CB8 462 aaKnown RBP12.27□□□□□ -0.45
VRK3-219ENST00000600137 DDIT4LQ96D03 193 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 ZFP3Q96NJ6 502 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 UCK2Q9BZX2 261 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 MAN2C1Q9NTJ4 1040 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 JKAMPQ9P055 326 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.27□□□□□ -0.45
VRK3-219ENST00000600137 RPS6KB2Q9UBS0 482 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 ZNF629Q9UEG4 869 aaPredicted RBP12.27□□□□□ -0.45
VRK3-219ENST00000600137 RIMS3Q9UJD0 308 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 RPS6KA6Q9UK32 745 aa12.27□□□□□ -0.45
VRK3-219ENST00000600137 HECTD1Q9ULT8 2610 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 A0A1W2PNV4 684 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 ELOA3DA6NLF2 546 aaPredicted RBP12.26□□□□□ -0.45
VRK3-219ENST00000600137 CYTIPO60759 359 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 OR5F1O95221 314 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 IL18BPO95998 194 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 CGAP01215 116 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 CRHP06850 196 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 TMIGD3P0DMS9 266 aaPredicted RBP12.26□□□□□ -0.45
VRK3-219ENST00000600137 FPR1P21462 350 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 CHRNB4P30926 498 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 NTF4P34130 210 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 NCALDP61601 193 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 VLDLRP98155 873 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 ELOA3BQ3SY89 546 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 DNAL1Q4LDG9 190 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 DEF8Q6ZN54 512 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 FCRLAQ7L513 359 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 CCDC103Q8IW40 242 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 ELOA3Q8NG57 546 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 ABHD3Q8WU67 409 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 ASB5Q8WWX0 329 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 GEMIN6Q8WXD5 167 aaKnown RBP12.26□□□□□ -0.45
VRK3-219ENST00000600137 STARD4Q96DR4 205 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 SLC41A3Q96GZ6 507 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 PYURFQ96I23 114 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 NSMCE2Q96MF7 247 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 TMEM43Q9BTV4 400 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 POLR2J2Q9GZM3 115 aaKnown RBP12.26□□□□□ -0.45
VRK3-219ENST00000600137 POLR2J3Q9H1A7 115 aaKnown RBP12.26□□□□□ -0.45
VRK3-219ENST00000600137 MEPEQ9NQ76 525 aaPredicted RBP12.26□□□□□ -0.45
VRK3-219ENST00000600137 TIGARQ9NQ88 270 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 NDUFAF4Q9P032 175 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 MCTS1Q9ULC4 181 aaKnown RBP12.26□□□□□ -0.45
VRK3-219ENST00000600137 SLC7A7Q9UM01 511 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 ALPK2Q86TB3 2170 aa12.26□□□□□ -0.45
VRK3-219ENST00000600137 ZNF716A6NP11 495 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 DNPH1O43598 174 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 DNAJC8O75937 253 aaPredicted RBP12.25□□□□□ -0.45
VRK3-219ENST00000600137 ATP5HO75947 161 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 SYNGR4O95473 234 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 CLDN14O95500 239 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 BGLAPP02818 100 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 IDUAP35475 653 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 YAP1P46937 504 aaKnown RBP12.25□□□□□ -0.45
VRK3-219ENST00000600137 OR2B6P58173 313 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 CSNK2A1P68400 391 aaPredicted RBP12.25□□□□□ -0.45
VRK3-219ENST00000600137 LSM11P83369 360 aaKnown RBP eCLIP12.25□□□□□ -0.45
VRK3-219ENST00000600137 ABLIM2Q6H8Q1 611 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 VWA1Q6PCB0 445 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 NHLRC1Q6VVB1 395 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 CYP2R1Q6VVX0 501 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 ASRGL1Q7L266 308 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 BTLAQ7Z6A9 289 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 MFSD8Q8NHS3 518 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 ASB9Q96DX5 294 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 PRRC1Q96M27 445 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 PSD2Q9BQI7 771 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 MUC13Q9H3R2 512 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 CLEC4AQ9UMR7 237 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 SAMD4AQ9UPU9 718 aaKnown RBP12.25□□□□□ -0.45
VRK3-219ENST00000600137 ENPP4Q9Y6X5 453 aa12.25□□□□□ -0.45
VRK3-219ENST00000600137 IGKV3D-15A0A087WSY6 115 aa12.24□□□□□ -0.45
VRK3-219ENST00000600137 NBPF19A0A087WUL8 3843 aa12.24□□□□□ -0.45
VRK3-219ENST00000600137 LRRN3E7EW58 273 aa12.24□□□□□ -0.45
VRK3-219ENST00000600137 C19orf84I3L1E1 186 aa12.24□□□□□ -0.45
VRK3-219ENST00000600137 SS18L1O75177 396 aaPredicted RBP12.24□□□□□ -0.45
VRK3-219ENST00000600137 IFNW1P05000 195 aa12.24□□□□□ -0.45
VRK3-219ENST00000600137 THRBP10828 461 aa12.24□□□□□ -0.45
VRK3-219ENST00000600137 PTNP21246 168 aa12.24□□□□□ -0.45
VRK3-219ENST00000600137 RPS5P46782 204 aaKnown RBP12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms