RNA–Protein interactions for RNA: ENST00000600117.1

CCDC9-205, Transcript of coiled-coil domain containing 9, humanhuman

TSL 2

Gene CCDC9, Length 580 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-205ENST00000600117 A0A1W2PNR3 127 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 DHRS12A0PJE2 317 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 GJE1A6NN92 205 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 A8MVM7 634 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 AHRRA9YTQ3 701 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 H0Y3Z8 333 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 EIF1AYO14602 144 aaKnown RBP16.9■□□□□ 0.3
CCDC9-205ENST00000600117 PRRG2O14669 202 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 TNFSF11O14788 317 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 DIRAS1O95057 198 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 FABP3P05413 133 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 GPIP06744 558 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 TFPIP10646 304 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 UMPSP11172 480 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 RHCEP18577 417 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 ERFP50548 548 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 EGR4Q05215 589 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 RTL6Q6ICC9 239 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 ZNF585AQ6P3V2 769 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 NKAIN4Q8IVV8 208 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 PIK3C3Q8NEB9 887 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 OR10D3Q8NH80 312 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 ZPLD1Q8TCW7 415 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 STK35Q8TDR2 534 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 MPP4Q96JB8 637 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 ARL5BQ96KC2 179 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 OR5B2Q96R09 309 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 ZNF426Q9BUY5 554 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 CHST11Q9NPF2 352 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 SELENONQ9NZV5 590 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 RHCGQ9UBD6 479 aa16.9■□□□□ 0.3
CCDC9-205ENST00000600117 KDM4EB2RXH2 506 aaPredicted RBP16.89■□□□□ 0.29
CCDC9-205ENST00000600117 WDR1O75083 606 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 MT-ND1P03886 318 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 ITGA2P17301 1181 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 CA7P43166 264 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 CHRNB3Q05901 458 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 ST3GAL3Q11203 375 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 MYBPHQ13203 477 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 ACSF3Q4G176 576 aaPredicted RBP16.89■□□□□ 0.29
CCDC9-205ENST00000600117 FAM98BQ52LJ0 330 aaKnown RBP16.89■□□□□ 0.29
CCDC9-205ENST00000600117 HBMQ6B0K9 141 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 RNF217Q8TC41 542 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 SLCO4A1Q96BD0 722 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 DDIT4LQ96D03 193 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 ZNF845Q96IR2 970 aaPredicted RBP16.89■□□□□ 0.29
CCDC9-205ENST00000600117 DHRS1Q96LJ7 313 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 TMEM43Q9BTV4 400 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 POTEKPQ9BYX7 375 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 TP63Q9H3D4 680 aaPredicted RBP16.89■□□□□ 0.29
CCDC9-205ENST00000600117 HDGFL3Q9Y3E1 203 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 FAM215AQ9Y5M1 114 aa16.89■□□□□ 0.29
CCDC9-205ENST00000600117 KIAA1549Q9HCM3 1950 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 ERICH4A6NGS2 130 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 FIGNL2A6NMB9 653 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 CLCA1A8K7I4 914 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 CXCL13O43927 109 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 RAP2AP10114 183 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 IMPDH2P12268 514 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 GABRA1P14867 456 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 PTNP21246 168 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 ACVR2AP27037 513 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 SLC7A1P30825 629 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 TESK1Q15569 626 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 C1orf140Q5VVS0 124 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 SPNS3Q6ZMD2 512 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 C3P1Q6ZMU1 363 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 TMPPEQ6ZT21 453 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 CYP4Z1Q86W10 505 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 P3H2Q8IVL5 708 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 PAPD5Q8NDF8 572 aaKnown RBP16.88■□□□□ 0.29
CCDC9-205ENST00000600117 ITLN2Q8WWU7 325 aaPredicted RBP16.88■□□□□ 0.29
CCDC9-205ENST00000600117 DNAJA3Q96EY1 480 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 RAB3IPQ96QF0 476 aaPredicted RBP16.88■□□□□ 0.29
CCDC9-205ENST00000600117 UCN2Q96RP3 112 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 PIP5K1AQ99755 562 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 PTDSS2Q9BVG9 487 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 FNDC11Q9BVV2 318 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 SRXN1Q9BYN0 137 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 NMNAT1Q9HAN9 279 aaPredicted RBP16.88■□□□□ 0.29
CCDC9-205ENST00000600117 ALKBH4Q9NXW9 302 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 CLCF1Q9UBD9 225 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 AURKCQ9UQB9 309 aa16.88■□□□□ 0.29
CCDC9-205ENST00000600117 FAM32AQ9Y421 112 aaKnown RBP16.88■□□□□ 0.29
CCDC9-205ENST00000600117 TRGV8A0A0C4DH27 118 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 HOXD4P09016 255 aaPredicted RBP16.87■□□□□ 0.29
CCDC9-205ENST00000600117 COX6B1P14854 86 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 IFNA8P32881 189 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 EIF1AXP47813 144 aaKnown RBP16.87■□□□□ 0.29
CCDC9-205ENST00000600117 DIO1P49895 249 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 ACTR3P61158 418 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 RPS3AP61247 264 aaKnown RBP16.87■□□□□ 0.29
CCDC9-205ENST00000600117 KPNB1Q14974 876 aaKnown RBP16.87■□□□□ 0.29
CCDC9-205ENST00000600117 TRAM2Q15035 370 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 C1orf185Q5T7R7 199 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 PLXDC2Q6UX71 529 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 SEM1Q6ZVN7 128 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 RPRMLQ8N4K4 120 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 TMEM255BQ8WV15 326 aa16.87■□□□□ 0.29
CCDC9-205ENST00000600117 OSTF1Q92882 214 aa16.87■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms