RNA–Protein interactions for RNA: ENST00000599454.5

PNKP-212, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 3

Gene PNKP, Length 529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-212ENST00000599454 KRTAP24-1Q3LI83 254 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 TSPO2Q5TGU0 170 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 C9orf135Q5VTT2 229 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 ABHD12BQ7Z5M8 362 aaPredicted RBP18.51■□□□□ 0.55
PNKP-212ENST00000599454 ANKRD46Q86W74 232 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 POMGNT2Q8NAT1 580 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 BOD1Q96IK1 185 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 PIMREGQ9BSJ6 248 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 MYOZ1Q9NP98 299 aaPredicted RBP18.51■□□□□ 0.55
PNKP-212ENST00000599454 MARCOQ9UEW3 520 aaPredicted RBP18.51■□□□□ 0.55
PNKP-212ENST00000599454 OSGIN1Q9UJX0 560 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 PRDM4Q9UKN5 801 aa18.51■□□□□ 0.55
PNKP-212ENST00000599454 TMEM72A0PK05 275 aa18.5■□□□□ 0.55
PNKP-212ENST00000599454 ATP6V1G2-DDX39BF2Z307 99 aa18.5■□□□□ 0.55
PNKP-212ENST00000599454 IMPDH2P12268 514 aa18.5■□□□□ 0.55
PNKP-212ENST00000599454 CHI3L1P36222 383 aaPredicted RBP18.5■□□□□ 0.55
PNKP-212ENST00000599454 SLC1A3P43003 542 aa18.5■□□□□ 0.55
PNKP-212ENST00000599454 SLC25A3Q00325 362 aa18.5■□□□□ 0.55
PNKP-212ENST00000599454 FAM166AQ6J272 317 aa18.5■□□□□ 0.55
PNKP-212ENST00000599454 CNOT9Q92600 299 aaKnown RBP18.5■□□□□ 0.55
PNKP-212ENST00000599454 TRNT1Q96Q11 434 aaKnown RBP18.5■□□□□ 0.55
PNKP-212ENST00000599454 SF3B5Q9BWJ5 86 aaKnown RBP18.5■□□□□ 0.55
PNKP-212ENST00000599454 AKTIPQ9H8T0 292 aa18.5■□□□□ 0.55
PNKP-212ENST00000599454 AGAP5A6NIR3 686 aa18.49■□□□□ 0.55
PNKP-212ENST00000599454 CLDN24A6NM45 220 aa18.49■□□□□ 0.55
PNKP-212ENST00000599454 TACR3P29371 465 aa18.49■□□□□ 0.55
PNKP-212ENST00000599454 ANXA11P50995 505 aaKnown RBP18.49■□□□□ 0.55
PNKP-212ENST00000599454 CLNS1AP54105 237 aaKnown RBP18.49■□□□□ 0.55
PNKP-212ENST00000599454 SNRPD2P62316 118 aaKnown RBP18.49■□□□□ 0.55
PNKP-212ENST00000599454 GNA13Q14344 377 aa18.49■□□□□ 0.55
PNKP-212ENST00000599454 CASP8Q14790 479 aa18.49■□□□□ 0.55
PNKP-212ENST00000599454 PDCD2Q16342 344 aaPredicted RBP18.49■□□□□ 0.55
PNKP-212ENST00000599454 MST1LQ2TV78 715 aa18.49■□□□□ 0.55
PNKP-212ENST00000599454 NUDCD3Q8IVD9 361 aa18.49■□□□□ 0.55
PNKP-212ENST00000599454 LRRC34Q8IZ02 419 aa18.49■□□□□ 0.55
PNKP-212ENST00000599454 FBXO17Q96EF6 278 aa18.49■□□□□ 0.55
PNKP-212ENST00000599454 SLC35A5Q9BS91 424 aa18.49■□□□□ 0.55
PNKP-212ENST00000599454 ROPN1BQ9BZX4 212 aaPredicted RBP18.49■□□□□ 0.55
PNKP-212ENST00000599454 ROPN1Q9HAT0 212 aaPredicted RBP18.49■□□□□ 0.55
PNKP-212ENST00000599454 PRAMEF27A3QJZ7 478 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 HMGN4O00479 90 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 AP3D1O14617 1153 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 LY6HO94772 140 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 SNUPNO95149 360 aaKnown RBP18.48■□□□□ 0.55
PNKP-212ENST00000599454 GPIP06744 558 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 MYZAPP0CAP1 466 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 HNF1AP20823 631 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 IGFBP5P24593 272 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 ETV4P43268 484 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 NR4A2P43354 598 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 IFFO1Q0D2I5 559 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 GGTLC2Q14390 218 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 OTUD3Q5T2D3 398 aaPredicted RBP18.48■□□□□ 0.55
PNKP-212ENST00000599454 LRRC74BQ6ZQY2 392 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 AAED1Q7RTV5 226 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 KIRREL3Q8IZU9 778 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 WDR60Q8WVS4 1066 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 MOKQ9UQ07 419 aa18.48■□□□□ 0.55
PNKP-212ENST00000599454 LOC100289279A0A1B0GTE1 492 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 LOC390937A0A1W2PQ73 354 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 CFAP73A6NFT4 308 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 PDE5AO76074 875 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 GSTA3Q16772 222 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 SPANXN4Q5MJ08 99 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 HMGN2P46Q86SG4 172 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 ZNF440Q8IYI8 595 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 TRIML2Q8N7C3 387 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 ARIH2OSQ8N7S6 290 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 OR9K2Q8NGE7 335 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 PPP1R36Q96LQ0 422 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 CCDC115Q96NT0 180 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 SORCS2Q96PQ0 1159 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 KCNS3Q9BQ31 491 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 C19orf24Q9BVV8 132 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 ADAM19Q9H013 955 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 SLC38A1Q9H2H9 487 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 MTHFD2LQ9H903 347 aaPredicted RBP18.47■□□□□ 0.55
PNKP-212ENST00000599454 MOV10Q9HCE1 1003 aaKnown RBP18.47■□□□□ 0.55
PNKP-212ENST00000599454 BTNL2Q9UIR0 455 aa18.47■□□□□ 0.55
PNKP-212ENST00000599454 FBXO9Q9UK97 447 aaPredicted RBP18.47■□□□□ 0.55
PNKP-212ENST00000599454 EPB41L3Q9Y2J2 1087 aaPredicted RBP18.47■□□□□ 0.55
PNKP-212ENST00000599454 ZC3H12DA2A288 527 aaKnown RBP18.46■□□□□ 0.55
PNKP-212ENST00000599454 E9PBE3 544 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 TYROBPO43914 113 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 DBIP07108 87 aaKnown RBP18.46■□□□□ 0.55
PNKP-212ENST00000599454 APEHP13798 732 aaKnown RBP18.46■□□□□ 0.55
PNKP-212ENST00000599454 IL7RP16871 459 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 RPS4Y1P22090 263 aaKnown RBP18.46■□□□□ 0.55
PNKP-212ENST00000599454 EPS8Q12929 822 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 FAM120AOSQ5T036 256 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 RNF130Q86XS8 419 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 TMEM99Q8N816 258 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 ZNF781Q8N8C0 355 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 ANKFN1Q8N957 763 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 ZIC4Q8N9L1 334 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 ZNF540Q8NDQ6 660 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 ZNF317Q96PQ6 595 aaPredicted RBP18.46■□□□□ 0.55
PNKP-212ENST00000599454 KATNB1Q9BVA0 655 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 PRR14Q9BWN1 585 aa18.46■□□□□ 0.55
PNKP-212ENST00000599454 TMEM45AQ9NWC5 275 aa18.46■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms